BLASTX nr result

ID: Coptis24_contig00013448 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013448
         (1844 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]   120   8e-38
gb|ABJ96383.1| hypothetical protein [Prunus persica]                  153   2e-36
emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]   152   2e-34
emb|CCH50966.1| T4.5 [Malus x robusta]                                145   5e-34
ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846...   142   2e-31

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score =  120 bits (302), Expect(2) = 8e-38
 Identities = 75/213 (35%), Positives = 112/213 (52%), Gaps = 4/213 (1%)
 Frame = +1

Query: 199  LGLIAEHLNSIEDYIRFGTVCRSWQSVTVDQRRYNFSPKTLPWMMFPFYEKGEVDNNYSG 378
            L LIAE L+S+EDY+RFG VC+SW S+  D+     S K+ PW+M    E  E+   YS 
Sbjct: 930  LKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKS-PWLMLAEKENSEIRGFYS- 987

Query: 379  SHEFYSLSEGVHKLYLPEAINCSCSGSPYGWLIIRGNQ-RMEILNPLSRVSFLLPPISM- 552
                  LS  V+++ LPE +   C GSPYGWL+  G    M +LNPL+RV  LLP +   
Sbjct: 988  -----PLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTDLDMCLLNPLTRVQILLPSLRAC 1042

Query: 553  --LEDFVGSDPSYCTNSTHLVILPSSSSTVPLKELFVAFVLFREDGKLAFARPTDRAWTT 726
              L   + S  +  + S  + I  +  S+ P        +++ + G+LAF +P  + WT 
Sbjct: 1043 PNLNTLIDSS-TQGSRSKDIFIYKAVLSSAPSSPDCAVMIIYSDYGRLAFTKPGHQTWTL 1101

Query: 727  MKISNTSHKDILLFNNKFYIVDTEGMLWCFDIT 825
            ++  +    DI+ FN  F  V+    +W  DI+
Sbjct: 1102 LESESGPVDDIIYFNGSFLAVNLSWEVWICDIS 1134



 Score = 64.7 bits (156), Expect(2) = 8e-38
 Identities = 46/144 (31%), Positives = 70/144 (48%), Gaps = 3/144 (2%)
 Frame = +3

Query: 882  DIEDECRNLYLVELLGDLHMVVKFFSYEPEPVXXXXXXXXXXXXCYYFKVFKLDFGSKKW 1061
            +IE E +  YLVE  G+++MV +        +             + F V KLD  +K+W
Sbjct: 1154 EIEYEAK--YLVESGGEIYMVTR-------NLYDTARRDIPYMRTWTFSVLKLDMCNKRW 1204

Query: 1062 EEVHTLGDYALFVGLNTSFSILVSDHPEC-KGSVFFTDHDAEYLQ-PWGFYMGTFKLETK 1235
            EEV  L   + F+G N SFS   SD+PE  K S++FTD    +L  P  F MG +  +  
Sbjct: 1205 EEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIPRNFDMGIYNFQNT 1264

Query: 1236 TLQLFYENGD-FCWNTCPVWIMPN 1304
             ++ +    D     + P+WI P+
Sbjct: 1265 QIEHYPVGHDALSMFSAPLWIRPS 1288


>gb|ABJ96383.1| hypothetical protein [Prunus persica]
          Length = 193

 Score =  153 bits (387), Expect(2) = 2e-36
 Identities = 67/124 (54%), Positives = 89/124 (71%)
 Frame = -3

Query: 1842 FCDADWAGCPVDRRSINGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWL 1663
            FCDADWAGCP DRRS  GF ++ G N +SWSAKKQ TV+RSSTE+EYR        + WL
Sbjct: 40   FCDADWAGCPDDRRSTGGFAIYLGCNLVSWSAKKQHTVARSSTEAEYRAIANTSTEITWL 99

Query: 1662 CLISQDLHLHLNASPTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTSGALQLKI 1483
              + Q+L    + SP LWCDN+GA  L++NP+FHARTKH+++DYH+ R+ V++G L ++ 
Sbjct: 100  RSLLQELGFSTSTSPVLWCDNLGATYLSANPIFHARTKHVEIDYHFVRDQVSAGKLSVQF 159

Query: 1482 FSPK 1471
             S K
Sbjct: 160  ISTK 163



 Score = 27.3 bits (59), Expect(2) = 2e-36
 Identities = 12/25 (48%), Positives = 17/25 (68%)
 Frame = -2

Query: 1486 DIFTEGLSSPRFYLLKSKLSIAAQS 1412
            DI T+ LSSPRF  ++ KL +  +S
Sbjct: 168  DIMTKPLSSPRFTFIRDKLRVHERS 192


>emb|CAN67073.1| hypothetical protein VITISV_011746 [Vitis vinifera]
          Length = 879

 Score =  152 bits (385), Expect = 2e-34
 Identities = 71/113 (62%), Positives = 88/113 (77%)
 Frame = -3

Query: 1842 FCDADWAGCPVDRRSINGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWL 1663
            FCD+DWAG P DRRS  G+ VFFGS  ISW+AKKQS V+RSSTE+EYR        LYW+
Sbjct: 762  FCDSDWAGNPDDRRSTTGYGVFFGSCLISWTAKKQSVVARSSTEAEYRALTITTAELYWI 821

Query: 1662 CLISQDLHLHLNASPTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTS 1504
             ++ ++LH+ L  +PT+WCDN GALALASNPVFHARTKHI+VD+H+ RE V +
Sbjct: 822  RMLLKELHISLPTAPTIWCDNSGALALASNPVFHARTKHIEVDFHFIREKVAN 874


>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  145 bits (366), Expect(2) = 5e-34
 Identities = 67/112 (59%), Positives = 82/112 (73%)
 Frame = -3

Query: 1836 DADWAGCPVDRRSINGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWLCL 1657
            DADWAGCPVDRRS +G+ VF GSN ISWSAKKQ+TV+RSSTE+EYR        + W+C 
Sbjct: 1502 DADWAGCPVDRRSTSGYCVFLGSNLISWSAKKQATVARSSTEAEYRSLANTAAEITWVCK 1561

Query: 1656 ISQDLHLHLNASPTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTSG 1501
            I  D+   L  +P ++CDN   +ALA NPVFHARTKH+++DYHY RE V  G
Sbjct: 1562 ILHDISFPLLKTPVIYCDNKSVIALAFNPVFHARTKHVEIDYHYIREKVLLG 1613



 Score = 27.3 bits (59), Expect(2) = 5e-34
 Identities = 13/25 (52%), Positives = 18/25 (72%)
 Frame = -2

Query: 1486 DIFTEGLSSPRFYLLKSKLSIAAQS 1412
            DIFT+ L++ RF  L SKLS+ + S
Sbjct: 1628 DIFTKPLAADRFAALTSKLSVRSPS 1652


>ref|XP_003560110.1| PREDICTED: uncharacterized protein LOC100846463 [Brachypodium
            distachyon]
          Length = 989

 Score =  142 bits (359), Expect = 2e-31
 Identities = 65/122 (53%), Positives = 85/122 (69%)
 Frame = -3

Query: 1842 FCDADWAGCPVDRRSINGFIVFFGSNPISWSAKKQSTVSRSSTESEYRXXXXXXXXLYWL 1663
            F DADWAGC  DRRS  GF VF G N +SWS++KQ TVSRSSTE+EY+          W+
Sbjct: 835  FTDADWAGCSDDRRSTGGFAVFLGPNLVSWSSRKQPTVSRSSTEAEYKVLANGTAEAIWI 894

Query: 1662 CLISQDLHLHLNASPTLWCDNIGALALASNPVFHARTKHIKVDYHYTRELVTSGALQLKI 1483
              + ++L ++ +  P LWCDNIGA  L++NPVFHARTKHI++D+H+ RE V  GAL ++ 
Sbjct: 895  QSVLKELGVYQSRPPVLWCDNIGATYLSANPVFHARTKHIEIDFHFVREKVALGALDVRS 954

Query: 1482 FS 1477
             S
Sbjct: 955  IS 956


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