BLASTX nr result

ID: Coptis24_contig00013447 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013447
         (344 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515917.1| conserved hypothetical protein [Ricinus comm...   126   2e-27
ref|XP_002883560.1| hypothetical protein ARALYDRAFT_479996 [Arab...   122   2e-26
ref|NP_189122.1| uncharacterized protein [Arabidopsis thaliana] ...   122   4e-26
ref|XP_002512643.1| conserved hypothetical protein [Ricinus comm...   120   1e-25
ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|2...   120   1e-25

>ref|XP_002515917.1| conserved hypothetical protein [Ricinus communis]
           gi|223544822|gb|EEF46337.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 419

 Score =  126 bits (317), Expect = 2e-27
 Identities = 59/80 (73%), Positives = 70/80 (87%)
 Frame = +3

Query: 105 IKSLKSGEFGTISLASKWCPSLDSSFDKATLLCESITRKVFPCESYSGYEGVEDAHYAYR 284
           ++ LK+GE   ISLA+KWCPSL+SSFD++TLLCESI RKVFP ESY  YEGVE+AHYAYR
Sbjct: 275 LEHLKAGEMKNISLAAKWCPSLNSSFDRSTLLCESIARKVFPRESYPEYEGVEEAHYAYR 334

Query: 285 VCDRLRKEILAPLRQVLELP 344
           + DRLRKE+L PLR+VLELP
Sbjct: 335 IRDRLRKEVLVPLREVLELP 354


>ref|XP_002883560.1| hypothetical protein ARALYDRAFT_479996 [Arabidopsis lyrata subsp.
           lyrata] gi|297329400|gb|EFH59819.1| hypothetical protein
           ARALYDRAFT_479996 [Arabidopsis lyrata subsp. lyrata]
          Length = 730

 Score =  122 bits (307), Expect = 2e-26
 Identities = 58/80 (72%), Positives = 68/80 (85%)
 Frame = +3

Query: 105 IKSLKSGEFGTISLASKWCPSLDSSFDKATLLCESITRKVFPCESYSGYEGVEDAHYAYR 284
           ++ L SG+   ISLA+KWCPSLDSSFDKATLLCESI RK+FP ES+  YEGVEDAHYAYR
Sbjct: 344 LEFLTSGQPNKISLAAKWCPSLDSSFDKATLLCESIARKIFPQESFPEYEGVEDAHYAYR 403

Query: 285 VCDRLRKEILAPLRQVLELP 344
           V DRLRK++L PLR+ L+LP
Sbjct: 404 VRDRLRKQVLVPLRKTLQLP 423


>ref|NP_189122.1| uncharacterized protein [Arabidopsis thaliana]
           gi|91805517|gb|ABE65487.1| hypothetical protein
           At3g24780 [Arabidopsis thaliana]
           gi|332643425|gb|AEE76946.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 715

 Score =  122 bits (305), Expect = 4e-26
 Identities = 57/80 (71%), Positives = 68/80 (85%)
 Frame = +3

Query: 105 IKSLKSGEFGTISLASKWCPSLDSSFDKATLLCESITRKVFPCESYSGYEGVEDAHYAYR 284
           ++ L SG+   ISLA+KWCPSLDSSFDKATL+CESI RK+FP ES+  YEGVEDAHYAYR
Sbjct: 333 LEFLTSGQPNKISLAAKWCPSLDSSFDKATLICESIARKIFPQESFPEYEGVEDAHYAYR 392

Query: 285 VCDRLRKEILAPLRQVLELP 344
           V DRLRK++L PLR+ L+LP
Sbjct: 393 VRDRLRKQVLVPLRKTLQLP 412


>ref|XP_002512643.1| conserved hypothetical protein [Ricinus communis]
           gi|223548604|gb|EEF50095.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 657

 Score =  120 bits (301), Expect = 1e-25
 Identities = 55/80 (68%), Positives = 67/80 (83%)
 Frame = +3

Query: 105 IKSLKSGEFGTISLASKWCPSLDSSFDKATLLCESITRKVFPCESYSGYEGVEDAHYAYR 284
           I+ LKSG+   +SLA+KWCPS+DSSFDK+TLLCES+ RK+F  E Y  YEGVE+ HYAYR
Sbjct: 285 IEYLKSGQIRKVSLAAKWCPSIDSSFDKSTLLCESVARKIFTRELYPEYEGVEEVHYAYR 344

Query: 285 VCDRLRKEILAPLRQVLELP 344
           + DRLRKE+L PLR+VLELP
Sbjct: 345 IRDRLRKEVLVPLRKVLELP 364


>ref|XP_002304655.1| predicted protein [Populus trichocarpa] gi|222842087|gb|EEE79634.1|
           predicted protein [Populus trichocarpa]
          Length = 651

 Score =  120 bits (301), Expect = 1e-25
 Identities = 56/80 (70%), Positives = 67/80 (83%)
 Frame = +3

Query: 105 IKSLKSGEFGTISLASKWCPSLDSSFDKATLLCESITRKVFPCESYSGYEGVEDAHYAYR 284
           ++ L S     +SLA+KWCPS+DSSFD++TLLCESI RKVFP ESY  YEG+E+AHYAYR
Sbjct: 279 MQHLNSSNTTKVSLAAKWCPSIDSSFDRSTLLCESIARKVFPRESYPEYEGIEEAHYAYR 338

Query: 285 VCDRLRKEILAPLRQVLELP 344
           V DRLRKE+L PLR+VLELP
Sbjct: 339 VRDRLRKEVLVPLRKVLELP 358


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