BLASTX nr result

ID: Coptis24_contig00013444 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013444
         (626 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271013.2| PREDICTED: glutamate receptor 2.7-like [Viti...   167   1e-39
emb|CBI23990.3| unnamed protein product [Vitis vinifera]              165   7e-39
ref|XP_002273232.2| PREDICTED: glutamate receptor 2.8-like [Viti...   163   3e-38
emb|CBI23977.3| unnamed protein product [Vitis vinifera]              162   6e-38
ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Viti...   160   2e-37

>ref|XP_002271013.2| PREDICTED: glutamate receptor 2.7-like [Vitis vinifera]
          Length = 920

 Score =  167 bits (423), Expect = 1e-39
 Identities = 89/168 (52%), Positives = 119/168 (70%), Gaps = 1/168 (0%)
 Frame = -1

Query: 506 PVHVIMFLVLVLTSIQLAKAGDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDFYAIH 327
           P+ ++  L L +  I++A +   +   PV VGV+LDMDT +GK+   C+ MA+SDFYA H
Sbjct: 9   PLFLLCCLSLWIFFIEMAMS--QNTTIPVKVGVVLDMDTWLGKMGLSCITMALSDFYASH 66

Query: 326 DNYKTRLVLHSRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKSEHTEFIADLGYKVHIPI 147
            +YKTRLVL  RDSK D++ AA AA+DLL++ +VQAIIGP  S    F+  LG K H+PI
Sbjct: 67  GHYKTRLVLEIRDSKRDVVGAAAAALDLLQNEEVQAIIGPASSMQANFVIGLGDKAHVPI 126

Query: 146 ISFSATIPSIYS-RSPYFVRTAPDEQSQVKAIASITQAFEWRKVILIH 6
           ISFSAT PS+ S RSPYFVR   ++ +QV AI +I QAF WR+V+LI+
Sbjct: 127 ISFSATSPSLSSIRSPYFVRATLNDSAQVPAIRAIVQAFGWRQVVLIY 174


>emb|CBI23990.3| unnamed protein product [Vitis vinifera]
          Length = 1727

 Score =  165 bits (417), Expect = 7e-39
 Identities = 84/141 (59%), Positives = 106/141 (75%), Gaps = 1/141 (0%)
 Frame = -1

Query: 425  PVDVGVILDMDTSVGKISTRCMQMAISDFYAIHDNYKTRLVLHSRDSKLDIIFAAFAAMD 246
            PV VGV+LDMDT +GK+   C+ MA+SDFYA H +YKTRLVL  RDSK D++ AA AA+D
Sbjct: 841  PVKVGVVLDMDTWLGKMGLSCITMALSDFYASHGHYKTRLVLEIRDSKRDVVGAAAAALD 900

Query: 245  LLESSKVQAIIGPQKSEHTEFIADLGYKVHIPIISFSATIPSIYS-RSPYFVRTAPDEQS 69
            LL++ +VQAIIGP  S    F+  LG K H+PIISFSAT PS+ S RSPYFVR   ++ +
Sbjct: 901  LLQNEEVQAIIGPASSMQANFVIGLGDKAHVPIISFSATSPSLSSIRSPYFVRATLNDSA 960

Query: 68   QVKAIASITQAFEWRKVILIH 6
            QV AI +I QAF WR+V+LI+
Sbjct: 961  QVPAIRAIVQAFGWRQVVLIY 981



 Score =  140 bits (353), Expect = 2e-31
 Identities = 72/132 (54%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = -1

Query: 398 MDTSVGKISTRCMQMAISDFYAIHDNYKTRLVLHSRDSKLDIIFAAFAAMDLLESSKVQA 219
           MDT +GK+   C+ MA+SDFYA H +YKTRLV   R+SK D++ AA AA+DLL++  VQA
Sbjct: 1   MDTWLGKMGLSCISMALSDFYASHGHYKTRLVPEIRNSKRDVVGAAAAALDLLQNEDVQA 60

Query: 218 IIGPQKSEHTEFIADLGYKVHIPIISFSATIPSIYS-RSPYFVRTAPDEQSQVKAIASIT 42
           IIGP  S    F+  LG K H+PIISFSAT PS+ S +S YF+R   ++ +QV AI +I 
Sbjct: 61  IIGPASSMQANFLIGLGDKTHVPIISFSATSPSLSSLQSQYFIRATLNDSAQVPAIRAIV 120

Query: 41  QAFEWRKVILIH 6
           QAF WR+V+LI+
Sbjct: 121 QAFGWREVVLIY 132


>ref|XP_002273232.2| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 1056

 Score =  163 bits (412), Expect = 3e-38
 Identities = 88/168 (52%), Positives = 118/168 (70%), Gaps = 1/168 (0%)
 Frame = -1

Query: 506 PVHVIMFLVLVLTSIQLAKAGDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDFYAIH 327
           P+ ++  L L +  I++A +   +   PV VGV+LDMDT +GK+   C+ MA+SDFYA H
Sbjct: 9   PLFLLCCLSLWIFFIEMAMS--QNTTIPVKVGVVLDMDTWLGKMGLSCITMALSDFYASH 66

Query: 326 DNYKTRLVLHSRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKSEHTEFIADLGYKVHIPI 147
            +YKTRLVL  RDSK D++ AA AA+DLL++ +VQAIIGP  S    F+  LG K H+PI
Sbjct: 67  GHYKTRLVLEIRDSKRDVMGAAAAALDLLQNEEVQAIIGPASSMQANFVIGLGDKAHVPI 126

Query: 146 ISFSATIPSIYS-RSPYFVRTAPDEQSQVKAIASITQAFEWRKVILIH 6
           ISFSAT PS+ S RS YFVR   ++ +QV AI +I QAF WR+V+LI+
Sbjct: 127 ISFSATSPSLSSLRSRYFVRATLNDSAQVPAIRAIVQAFGWRQVVLIY 174


>emb|CBI23977.3| unnamed protein product [Vitis vinifera]
          Length = 1834

 Score =  162 bits (409), Expect = 6e-38
 Identities = 87/172 (50%), Positives = 116/172 (67%), Gaps = 1/172 (0%)
 Frame = -1

Query: 518  KNHNPVHVIMFLVLVLTSIQLAKAGDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDF 339
            KN + +   +  VL  T   +  +   +   PV VGV+LDMDT +GK+   C+ MA+SDF
Sbjct: 1303 KNLSQLLTSLLFVLFPTIFFIEMSMAQNTTIPVKVGVVLDMDTWLGKMGLSCISMALSDF 1362

Query: 338  YAIHDNYKTRLVLHSRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKSEHTEFIADLGYKV 159
            YA H +YKTRLVL  RDSK D++ AA AA+DLL++ +VQAIIGP  S    F+  LG K 
Sbjct: 1363 YASHGHYKTRLVLEIRDSKRDVMGAAAAALDLLQNEEVQAIIGPASSMQANFVIGLGDKA 1422

Query: 158  HIPIISFSATIPSIYS-RSPYFVRTAPDEQSQVKAIASITQAFEWRKVILIH 6
            H+PIISFSAT PS+ S RS YFVR   ++ +QV A+ +I QAF WR+V+LI+
Sbjct: 1423 HVPIISFSATSPSLSSLRSRYFVRATLNDSAQVPAMRAIVQAFGWREVVLIY 1474



 Score =  141 bits (355), Expect = 1e-31
 Identities = 82/179 (45%), Positives = 104/179 (58%), Gaps = 39/179 (21%)
 Frame = -1

Query: 425 PVDVGVILDMDTSVGKISTRCMQMAISDFYAIHDNYKTRLVLHSRDSKLDIIFAAFA--- 255
           PV VGV+LDMDT +GK+   C+ MA+SDFYA H +YKTRLVL  RDS  D++ AA A   
Sbjct: 10  PVKVGVVLDMDTWLGKMGLSCISMALSDFYASHGHYKTRLVLEIRDSNRDVVGAAAADAK 69

Query: 254 -----------------------------------AMDLLESSKVQAIIGPQKSEHTEFI 180
                                              A+DLL++ +VQAIIGP  S    F+
Sbjct: 70  SLHKFNFLLGLIVNSNFVTILEKRGKLAKMTPMTYALDLLQNEEVQAIIGPASSMQANFV 129

Query: 179 ADLGYKVHIPIISFSATIPSIYS-RSPYFVRTAPDEQSQVKAIASITQAFEWRKVILIH 6
             LG K H+PIISFSAT PS+ S RS YFVR   ++ +QV AI +I QAF WR+V+LI+
Sbjct: 130 IGLGDKAHVPIISFSATSPSLSSLRSRYFVRATLNDSAQVPAIRAIVQAFGWRQVVLIY 188


>ref|XP_003631841.1| PREDICTED: glutamate receptor 2.8-like [Vitis vinifera]
          Length = 983

 Score =  160 bits (405), Expect = 2e-37
 Identities = 84/164 (51%), Positives = 115/164 (70%), Gaps = 1/164 (0%)
 Frame = -1

Query: 494 IMFLVLVLTSIQLAKAGDNDDVTPVDVGVILDMDTSVGKISTRCMQMAISDFYAIHDNYK 315
           + FL L +  I++  A   +   PV+VGV+LD DTS GK+   C+ MA+SDFYA H NYK
Sbjct: 12  LFFLSLWVLFIEMGMA--QNTTIPVNVGVVLDFDTSFGKMGLSCIPMALSDFYASHGNYK 69

Query: 314 TRLVLHSRDSKLDIIFAAFAAMDLLESSKVQAIIGPQKSEHTEFIADLGYKVHIPIISFS 135
           TRLVL +RDS+ D++ AA AA+DL+++ +VQAIIGP  S    F+  LG K  +PIISFS
Sbjct: 70  TRLVLKTRDSRRDVVGAAAAALDLIQNEEVQAIIGPGSSMQANFLIVLGQKAQVPIISFS 129

Query: 134 ATIPSIYS-RSPYFVRTAPDEQSQVKAIASITQAFEWRKVILIH 6
           A+ PS+ S RS YF+R   ++ +QV AI +I QAFEWR+ +LI+
Sbjct: 130 ASSPSLSSLRSQYFIRATLNDSAQVPAIIAIFQAFEWREAVLIY 173


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