BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013443
         (592 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-li...   288   5e-76
ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arab...   273   2e-71
ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabido...   267   9e-70
ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, ...   267   1e-69
ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein ho...   262   4e-68

>ref|XP_002272718.2| PREDICTED: Fanconi anemia group J protein-like [Vitis vinifera]
          Length = 1255

 Score =  288 bits (737), Expect = 5e-76
 Identities = 137/196 (69%), Positives = 160/196 (81%), Gaps = 1/196 (0%)
 Frame = +3

Query: 3    MEKLCTRWRETGQWSRLNAQKSLFVEPRG-SQDEFELTLKDYYDSIRQGNGSAAWXXXXX 179
            MEKLC+RWRETGQWS+LN QK LF+EPRG SQD+FE  LK YY+S+R+G           
Sbjct: 566  MEKLCSRWRETGQWSQLNEQKFLFIEPRGGSQDDFEPILKAYYESVRRGTKPTLGRKRRT 625

Query: 180  XXXXXXQSDVKETQQEPSRGGSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHDIQ 359
                  QSD KE+Q    + G+AFLAV RGKVSEG+DFSDENAR V+IVGIPFPN+HDIQ
Sbjct: 626  KKMDLSQSDEKESQDNSKKKGAAFLAVFRGKVSEGIDFSDENARAVIIVGIPFPNVHDIQ 685

Query: 360  VAEKKKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQER 539
            VA+KKK+ND YKSSK+LLSGNEWYC QAFRALNQAAGRCIRHRFDYG II +DERF+++R
Sbjct: 686  VAQKKKYNDMYKSSKDLLSGNEWYCHQAFRALNQAAGRCIRHRFDYGGIILLDERFREDR 745

Query: 540  NVAHVSKWLRKSLKQY 587
            N A++SKWLRKS+KQY
Sbjct: 746  NTAYISKWLRKSIKQY 761


>ref|XP_002893127.1| hypothetical protein ARALYDRAFT_889526 [Arabidopsis lyrata subsp.
            lyrata] gi|297338969|gb|EFH69386.1| hypothetical protein
            ARALYDRAFT_889526 [Arabidopsis lyrata subsp. lyrata]
          Length = 1171

 Score =  273 bits (697), Expect = 2e-71
 Identities = 133/196 (67%), Positives = 156/196 (79%), Gaps = 1/196 (0%)
 Frame = +3

Query: 3    MEKLCTRWRETGQWSRLNAQKSLFVEPRG-SQDEFELTLKDYYDSIRQGNGSAAWXXXXX 179
            MEKLCTRWRETGQWSRL  +K LFVEPRG +QDEF+  LK YYDSIR  N          
Sbjct: 572  MEKLCTRWRETGQWSRLCLKKDLFVEPRGGAQDEFDSVLKGYYDSIRGKNKLVG-----R 626

Query: 180  XXXXXXQSDVKETQQEPSRGGSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHDIQ 359
                     +K   Q+ S+ G+AFLAVCRGKVSEG+DF+D+NAR V+IVGIPFPN+HDIQ
Sbjct: 627  NRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSEGIDFADDNARAVIIVGIPFPNLHDIQ 686

Query: 360  VAEKKKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQER 539
            V  KKK+NDTYKSSK+LL G+EWYCQQA+RALNQAAGRCIRHRFDYGAIIF+DER+K++R
Sbjct: 687  VGLKKKYNDTYKSSKSLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIFLDERYKEQR 746

Query: 540  NVAHVSKWLRKSLKQY 587
            N A +SKWLR+S+K Y
Sbjct: 747  NRASISKWLRQSIKVY 762


>ref|NP_173495.5| RAD3-like DNA-binding helicase protein [Arabidopsis thaliana]
            gi|332191893|gb|AEE30014.1| RAD3-like DNA-binding
            helicase protein [Arabidopsis thaliana]
          Length = 1175

 Score =  267 bits (683), Expect = 9e-70
 Identities = 131/196 (66%), Positives = 154/196 (78%), Gaps = 1/196 (0%)
 Frame = +3

Query: 3    MEKLCTRWRETGQWSRLNAQKSLFVEPRG-SQDEFELTLKDYYDSIRQGNGSAAWXXXXX 179
            MEKLC RWRET QWSRL  +K LFVEPRG +QDEF+  LK YYDSIR  N          
Sbjct: 577  MEKLCMRWRETEQWSRLCLKKDLFVEPRGGAQDEFDSVLKGYYDSIRGKN-----KIIGR 631

Query: 180  XXXXXXQSDVKETQQEPSRGGSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHDIQ 359
                     +K   Q+ S+ G+AFLAVCRGKVSEG+DF+D+NAR V+IVGIPFPN+HDIQ
Sbjct: 632  NRRAKKAGPIKTETQDDSKKGAAFLAVCRGKVSEGIDFADDNARAVIIVGIPFPNLHDIQ 691

Query: 360  VAEKKKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQER 539
            V  KKK+NDTYKSSK+LL G+EWYCQQA+RALNQAAGRCIRHRFDYGAIIF+DER+K++R
Sbjct: 692  VGLKKKYNDTYKSSKSLLGGSEWYCQQAYRALNQAAGRCIRHRFDYGAIIFLDERYKEQR 751

Query: 540  NVAHVSKWLRKSLKQY 587
            N A +SKWLR+S+K Y
Sbjct: 752  NRASISKWLRQSIKVY 767


>ref|XP_002510693.1| brca1 interacting protein helicase 1 brip1, putative [Ricinus
            communis] gi|223551394|gb|EEF52880.1| brca1 interacting
            protein helicase 1 brip1, putative [Ricinus communis]
          Length = 1248

 Score =  267 bits (682), Expect = 1e-69
 Identities = 135/198 (68%), Positives = 156/198 (78%), Gaps = 3/198 (1%)
 Frame = +3

Query: 3    MEKLCTRWRETGQWSRLNAQKSLFVEPRGSQDE-FELTLKDYYDSIRQGNGSAAWXXXXX 179
            MEKLC RWRETGQWSRLNA+KSLFVEPRGSQ+E F+  LK YYDSI + N  A       
Sbjct: 572  MEKLCNRWRETGQWSRLNAKKSLFVEPRGSQEEEFDSVLKGYYDSICKCNTHAV-----G 626

Query: 180  XXXXXXQSDVKETQQEPSR--GGSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHD 353
                  + D+K+  +       G+AFLAVCRGKVSEGMDFSD+NARVV++VGIPFPNI D
Sbjct: 627  RKKRVKRLDLKKAVESTENLGKGAAFLAVCRGKVSEGMDFSDDNARVVIVVGIPFPNILD 686

Query: 354  IQVAEKKKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQ 533
            IQV  KK +NDTYK+SKNLLSGNEWYC QAFRALNQA GRCIRHRFDYGAII +DER+K+
Sbjct: 687  IQVRLKKSYNDTYKTSKNLLSGNEWYCYQAFRALNQAIGRCIRHRFDYGAIILLDERYKK 746

Query: 534  ERNVAHVSKWLRKSLKQY 587
            E+N  ++SKWLRKS+ QY
Sbjct: 747  EQNRMYISKWLRKSICQY 764


>ref|XP_004166814.1| PREDICTED: Fanconi anemia group J protein homolog [Cucumis sativus]
          Length = 1239

 Score =  262 bits (669), Expect = 4e-68
 Identities = 132/196 (67%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
 Frame = +3

Query: 3    MEKLCTRWRETGQWSRLNAQKSLFVEPRG-SQDEFELTLKDYYDSIRQGNGSAAWXXXXX 179
            MEKL  RW ETGQWSRLNA+KSLFVEPRG +Q++F+  LK YYD+IR G+  A       
Sbjct: 577  MEKLQNRWSETGQWSRLNARKSLFVEPRGGAQEDFDSILKGYYDTIRLGDNFAIGKKSRG 636

Query: 180  XXXXXXQSDVKETQQEPSRGGSAFLAVCRGKVSEGMDFSDENARVVVIVGIPFPNIHDIQ 359
                   S V     E  + G+A LAV RGKVSEG+DFSD+NARVV+IVGIPFPN++DIQ
Sbjct: 637  KKVKPNDSYVVGC--ENPKEGAALLAVFRGKVSEGIDFSDDNARVVIIVGIPFPNVNDIQ 694

Query: 360  VAEKKKFNDTYKSSKNLLSGNEWYCQQAFRALNQAAGRCIRHRFDYGAIIFMDERFKQER 539
            VA KKKFND YK SKNLLSGNEWYCQQAFRALNQAAGRCIRH+FDYGAI+ +DERF++ER
Sbjct: 695  VALKKKFNDAYKMSKNLLSGNEWYCQQAFRALNQAAGRCIRHKFDYGAIMLLDERFQEER 754

Query: 540  NVAHVSKWLRKSLKQY 587
            N  ++SKWLRKS+KQ+
Sbjct: 755  NRTYISKWLRKSIKQF 770