BLASTX nr result

ID: Coptis24_contig00013442 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013442
         (530 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002316338.1| predicted protein [Populus trichocarpa] gi|2...    66   4e-09
ref|XP_004143837.1| PREDICTED: uncharacterized protein YKR070W-l...    62   7e-08
ref|XP_002279261.1| PREDICTED: uncharacterized protein YKR070W [...    61   9e-08
emb|CAN80293.1| hypothetical protein VITISV_032013 [Vitis vinifera]    61   9e-08
ref|XP_004148779.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...    61   1e-07

>ref|XP_002316338.1| predicted protein [Populus trichocarpa] gi|222865378|gb|EEF02509.1|
           predicted protein [Populus trichocarpa]
          Length = 420

 Score = 65.9 bits (159), Expect = 4e-09
 Identities = 28/36 (77%), Positives = 33/36 (91%)
 Frame = -3

Query: 513 QVLCDILRTGGLPGKEDGQENQPPLYFAADDLEYQV 406
           QVLCD+LR GGLPG+E+G + QPPLYFAADDLEYQ+
Sbjct: 218 QVLCDVLRCGGLPGQENGHQPQPPLYFAADDLEYQL 253


>ref|XP_004143837.1| PREDICTED: uncharacterized protein YKR070W-like [Cucumis sativus]
           gi|449515865|ref|XP_004164968.1| PREDICTED:
           uncharacterized protein YKR070W-like [Cucumis sativus]
          Length = 449

 Score = 61.6 bits (148), Expect = 7e-08
 Identities = 27/35 (77%), Positives = 31/35 (88%)
 Frame = -3

Query: 513 QVLCDILRTGGLPGKEDGQENQPPLYFAADDLEYQ 409
           QVLCD+LR+GGLPG ++G  NQ PLYFAADDLEYQ
Sbjct: 277 QVLCDVLRSGGLPGYQNGNLNQVPLYFAADDLEYQ 311


>ref|XP_002279261.1| PREDICTED: uncharacterized protein YKR070W [Vitis vinifera]
           gi|296086087|emb|CBI31528.3| unnamed protein product
           [Vitis vinifera]
          Length = 373

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = -3

Query: 513 QVLCDILRTGGLPGKEDGQENQPPLYFAADDLEYQVS 403
           QVLCD+LR+GGLPG+E+G   QPPLYFAADDLEYQ +
Sbjct: 206 QVLCDVLRSGGLPGQENGP--QPPLYFAADDLEYQAA 240


>emb|CAN80293.1| hypothetical protein VITISV_032013 [Vitis vinifera]
          Length = 345

 Score = 61.2 bits (147), Expect = 9e-08
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = -3

Query: 513 QVLCDILRTGGLPGKEDGQENQPPLYFAADDLEYQVS 403
           QVLCD+LR+GGLPG+E+G   QPPLYFAADDLEYQ +
Sbjct: 201 QVLCDVLRSGGLPGQENG--XQPPLYFAADDLEYQAA 235


>ref|XP_004148779.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein
           YKR070W-like [Cucumis sativus]
          Length = 377

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 30/37 (81%), Positives = 32/37 (86%)
 Frame = -3

Query: 513 QVLCDILRTGGLPGKEDGQENQPPLYFAADDLEYQVS 403
           QVLCDILRTGGLPG+E G  NQP LYFA DDLEYQV+
Sbjct: 210 QVLCDILRTGGLPGREFG--NQPDLYFAHDDLEYQVT 244


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