BLASTX nr result

ID: Coptis24_contig00013440 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013440
         (1284 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273550.1| PREDICTED: short-chain dehydrogenase TIC 32,...   461   e-127
ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula] ...   456   e-126
ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|2...   451   e-124
ref|XP_003542461.1| PREDICTED: retinol dehydrogenase 12-like iso...   450   e-124
ref|NP_001241121.1| uncharacterized protein LOC100795299 [Glycin...   446   e-123

>ref|XP_002273550.1| PREDICTED: short-chain dehydrogenase TIC 32, chloroplastic [Vitis
            vinifera] gi|297741471|emb|CBI32603.3| unnamed protein
            product [Vitis vinifera]
          Length = 324

 Score =  461 bits (1185), Expect = e-127
 Identities = 226/318 (71%), Positives = 263/318 (82%)
 Frame = +3

Query: 111  MGMFSLVTGKPGASGFGSGSTSEQVTKGINASKLXXXXXXXXXXXXLETARVLALRGXXX 290
            MG+FSL+TG+PG SGFGS ST+EQVT+G++AS L             ETARVLALR    
Sbjct: 1    MGIFSLITGRPGPSGFGSASTAEQVTEGVDASNLTAIVTGGASGIGFETARVLALRKAHV 60

Query: 291  XXXXXXXXXXXXXKQLILKDNQSARIDVLKLDLCSMKSIKSFVDNFRALDLPLNILINNA 470
                         KQLILKDN++A +DVLKLDLCSMKSI++FVDNF AL+LPLN+LINNA
Sbjct: 61   VIAARNMDAANEAKQLILKDNEAAHVDVLKLDLCSMKSIRAFVDNFNALNLPLNLLINNA 120

Query: 471  GIMFCPYQLSEDGIEMQFATNHLGHFHLTNLLLDKMKNTARATGIEGRIVNLSSVAHLHT 650
            GIMFCP+QLS+DGIE QFATNH+GHF LTNLLLDKMK+TAR TGIEGRIVNLSS+AHLHT
Sbjct: 121  GIMFCPFQLSQDGIESQFATNHIGHFLLTNLLLDKMKSTARTTGIEGRIVNLSSIAHLHT 180

Query: 651  YDDGIRFDKINDKKGYSDKKAYGQSKLANILHANELSRRLQEEGANITVNSVHPGLIMTN 830
            Y++GI+FD IND+K YSDK+AYGQSKLANILHA ELSRRLQEEGANI+VN+VHPGLIMTN
Sbjct: 181  YENGIKFDGINDEKSYSDKRAYGQSKLANILHAKELSRRLQEEGANISVNAVHPGLIMTN 240

Query: 831  LMRHSVLLMNVLKVFTVFFWKNVPQGAATTSYVALHPNLKGVTGKYFEDCNETKPSKFAT 1010
            L RHS +LM +L++ +   WKNVPQGAATT YVALHP++KGV+GKY+ DCNE  PS +A+
Sbjct: 241  LFRHSAVLMKILQLLSYILWKNVPQGAATTCYVALHPSMKGVSGKYYLDCNEMAPSAYAS 300

Query: 1011 QEVLAKKLWDFSNKLVNS 1064
             E LAKKLWDFSNKLVNS
Sbjct: 301  DETLAKKLWDFSNKLVNS 318


>ref|XP_003637512.1| Retinol dehydrogenase [Medicago truncatula]
            gi|355503447|gb|AES84650.1| Retinol dehydrogenase
            [Medicago truncatula]
          Length = 323

 Score =  456 bits (1174), Expect = e-126
 Identities = 225/318 (70%), Positives = 263/318 (82%)
 Frame = +3

Query: 111  MGMFSLVTGKPGASGFGSGSTSEQVTKGINASKLXXXXXXXXXXXXLETARVLALRGXXX 290
            +G+FSLVTG  G SGFGS +T+EQVT+GI+AS L            LETARVLALR    
Sbjct: 2    VGIFSLVTGMAGPSGFGSSTTAEQVTQGIDASNLTAIITGGASGIGLETARVLALRKVHV 61

Query: 291  XXXXXXXXXXXXXKQLILKDNQSARIDVLKLDLCSMKSIKSFVDNFRALDLPLNILINNA 470
                         KQ+IL+DN+SAR+D++KLDLCS+KS++SFV+NF ALDLPLNILINNA
Sbjct: 62   IIAARNMESAKEAKQIILQDNESARVDIMKLDLCSVKSVRSFVENFLALDLPLNILINNA 121

Query: 471  GIMFCPYQLSEDGIEMQFATNHLGHFHLTNLLLDKMKNTARATGIEGRIVNLSSVAHLHT 650
            G+MFCP+QL++DGIEMQFATNHLGHF LTNLLL+KMK TA+ATGIEGRI+NLSS+AH +T
Sbjct: 122  GVMFCPFQLTQDGIEMQFATNHLGHFLLTNLLLEKMKQTAKATGIEGRIINLSSIAHTYT 181

Query: 651  YDDGIRFDKINDKKGYSDKKAYGQSKLANILHANELSRRLQEEGANITVNSVHPGLIMTN 830
            Y++GIR D IND+ GYSDKKAYGQSKLANILHANELSRRL+EEG NIT NSVHPG+IMT 
Sbjct: 182  YEEGIRLDNINDQIGYSDKKAYGQSKLANILHANELSRRLKEEGVNITANSVHPGVIMTP 241

Query: 831  LMRHSVLLMNVLKVFTVFFWKNVPQGAATTSYVALHPNLKGVTGKYFEDCNETKPSKFAT 1010
            LMRHS LLMN LK+FT + WKNVPQGAATT YVALHP+LKGVTGKYF DCNE +PS FA+
Sbjct: 242  LMRHSSLLMNFLKMFTFYIWKNVPQGAATTCYVALHPSLKGVTGKYFLDCNEFQPSAFAS 301

Query: 1011 QEVLAKKLWDFSNKLVNS 1064
              +L +KLWDFSNKL+NS
Sbjct: 302  NGLLGRKLWDFSNKLINS 319


>ref|XP_002309049.1| predicted protein [Populus trichocarpa] gi|222855025|gb|EEE92572.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  451 bits (1159), Expect = e-124
 Identities = 226/318 (71%), Positives = 249/318 (78%)
 Frame = +3

Query: 111  MGMFSLVTGKPGASGFGSGSTSEQVTKGINASKLXXXXXXXXXXXXLETARVLALRGXXX 290
            M  FSLVTG+PG SGFGS ST+EQVT+GI+AS L            LET RVLAL     
Sbjct: 1    MSFFSLVTGRPGTSGFGSASTAEQVTQGIDASNLTVLITGGASGIGLETTRVLALHKAHV 60

Query: 291  XXXXXXXXXXXXXKQLILKDNQSARIDVLKLDLCSMKSIKSFVDNFRALDLPLNILINNA 470
                         KQLILK+++ AR+DVLKLDL S+KSI+ F DN  +LDLPLNILINNA
Sbjct: 61   IIAARNMVAANEAKQLILKEDEDARVDVLKLDLSSIKSIREFADNLNSLDLPLNILINNA 120

Query: 471  GIMFCPYQLSEDGIEMQFATNHLGHFHLTNLLLDKMKNTARATGIEGRIVNLSSVAHLHT 650
            GIMFCPYQLSEDGIEMQFATNHLGHF LTNLLLDKMK TAR TG+EGRIVNLSSVAH+HT
Sbjct: 121  GIMFCPYQLSEDGIEMQFATNHLGHFLLTNLLLDKMKETARTTGVEGRIVNLSSVAHIHT 180

Query: 651  YDDGIRFDKINDKKGYSDKKAYGQSKLANILHANELSRRLQEEGANITVNSVHPGLIMTN 830
            Y DGIRF+ INDKK YSDK+AYGQSKLANILHA ELSRR QEEG NIT N+VHPGLIMTN
Sbjct: 181  YKDGIRFNNINDKKRYSDKRAYGQSKLANILHAKELSRRFQEEGVNITANAVHPGLIMTN 240

Query: 831  LMRHSVLLMNVLKVFTVFFWKNVPQGAATTSYVALHPNLKGVTGKYFEDCNETKPSKFAT 1010
            L +HS +LM  LK F+ F WKNVPQGAATT YVALHP+LKGVTGKY+ DCN   PS FA 
Sbjct: 241  LFKHSAILMRTLKFFSFFLWKNVPQGAATTCYVALHPSLKGVTGKYYVDCNSLGPSAFAR 300

Query: 1011 QEVLAKKLWDFSNKLVNS 1064
             E LA+KLWDFSNKL+ S
Sbjct: 301  DEALARKLWDFSNKLITS 318


>ref|XP_003542461.1| PREDICTED: retinol dehydrogenase 12-like isoform 1 [Glycine max]
          Length = 323

 Score =  450 bits (1158), Expect = e-124
 Identities = 220/318 (69%), Positives = 259/318 (81%)
 Frame = +3

Query: 111  MGMFSLVTGKPGASGFGSGSTSEQVTKGINASKLXXXXXXXXXXXXLETARVLALRGXXX 290
            +G+FSL+TG+PG SGFGS ST+EQV +GI+AS L            LETARVLA+R    
Sbjct: 2    VGIFSLITGRPGCSGFGSSSTAEQVIEGIDASNLTAIITGGASGIGLETARVLAIRKAHV 61

Query: 291  XXXXXXXXXXXXXKQLILKDNQSARIDVLKLDLCSMKSIKSFVDNFRALDLPLNILINNA 470
                         KQLIL++++SAR+D++KLDLCS+KS+ +FVDNF AL +PLNILINNA
Sbjct: 62   IIAARNMESAKEAKQLILEEDESARVDIMKLDLCSVKSVGTFVDNFIALGVPLNILINNA 121

Query: 471  GIMFCPYQLSEDGIEMQFATNHLGHFHLTNLLLDKMKNTARATGIEGRIVNLSSVAHLHT 650
            G+MFCPYQ +EDGIEMQFATNHLGHF LT LLLDKMK TA+ TGIEGRI+NLSS+AH++T
Sbjct: 122  GVMFCPYQQTEDGIEMQFATNHLGHFLLTKLLLDKMKQTAKDTGIEGRIINLSSIAHVYT 181

Query: 651  YDDGIRFDKINDKKGYSDKKAYGQSKLANILHANELSRRLQEEGANITVNSVHPGLIMTN 830
            Y++GIRFD IND+ GYSDKKAYGQSKLANILH NELSRRLQ EG NIT NSVHPG+IMT 
Sbjct: 182  YEEGIRFDNINDEDGYSDKKAYGQSKLANILHTNELSRRLQAEGVNITANSVHPGVIMTP 241

Query: 831  LMRHSVLLMNVLKVFTVFFWKNVPQGAATTSYVALHPNLKGVTGKYFEDCNETKPSKFAT 1010
            LMRHS LLMN LK+FT F WKN+PQGAATT YVALHP+LKGVTGKYF DCNE +PS  A+
Sbjct: 242  LMRHSSLLMNFLKMFTFFAWKNIPQGAATTCYVALHPSLKGVTGKYFRDCNECQPSTHAS 301

Query: 1011 QEVLAKKLWDFSNKLVNS 1064
             E+L +KLWDFSNK++NS
Sbjct: 302  NELLGRKLWDFSNKMINS 319


>ref|NP_001241121.1| uncharacterized protein LOC100795299 [Glycine max]
            gi|255636812|gb|ACU18739.1| unknown [Glycine max]
          Length = 323

 Score =  446 bits (1146), Expect = e-123
 Identities = 220/317 (69%), Positives = 258/317 (81%)
 Frame = +3

Query: 114  GMFSLVTGKPGASGFGSGSTSEQVTKGINASKLXXXXXXXXXXXXLETARVLALRGXXXX 293
            G+FSLVTG+PG SGFGS ST+EQVT+GI+AS L            LETARVLA+R     
Sbjct: 3    GIFSLVTGRPGLSGFGSSSTAEQVTEGIDASNLTAIITGGASGIGLETARVLAIRKVHVI 62

Query: 294  XXXXXXXXXXXXKQLILKDNQSARIDVLKLDLCSMKSIKSFVDNFRALDLPLNILINNAG 473
                        KQLIL++++SA +D++KLDLCS+KS+++FVDNF AL LPLNILINNAG
Sbjct: 63   IAARNMESAKEAKQLILQEDESACVDIMKLDLCSLKSVRTFVDNFIALGLPLNILINNAG 122

Query: 474  IMFCPYQLSEDGIEMQFATNHLGHFHLTNLLLDKMKNTARATGIEGRIVNLSSVAHLHTY 653
            +MFCPYQ +EDGIEMQFATN+LGHF LTNLLLDKMK TA+ TGIEGRIVNLSS+AHL+TY
Sbjct: 123  VMFCPYQQTEDGIEMQFATNYLGHFLLTNLLLDKMKQTAKDTGIEGRIVNLSSIAHLYTY 182

Query: 654  DDGIRFDKINDKKGYSDKKAYGQSKLANILHANELSRRLQEEGANITVNSVHPGLIMTNL 833
            ++GIRFD IND+ GY +KKAYGQSKLANILH NELSRRLQ EG NIT NSVHPG+IMT L
Sbjct: 183  EEGIRFDTINDEDGYHEKKAYGQSKLANILHTNELSRRLQAEGVNITANSVHPGVIMTPL 242

Query: 834  MRHSVLLMNVLKVFTVFFWKNVPQGAATTSYVALHPNLKGVTGKYFEDCNETKPSKFATQ 1013
            MRHS LLMN LK+F+   WKNVPQGAATT YVALHP+LKGVTGKY +DCNE+ PS  A+ 
Sbjct: 243  MRHSSLLMNFLKMFSFMIWKNVPQGAATTCYVALHPSLKGVTGKYLQDCNESPPSAHASN 302

Query: 1014 EVLAKKLWDFSNKLVNS 1064
            E+L +KLWDFSNK++NS
Sbjct: 303  ELLGRKLWDFSNKMINS 319


Top