BLASTX nr result

ID: Coptis24_contig00013439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013439
         (580 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004135391.1| PREDICTED: uncharacterized protein LOC101209...    98   1e-18
emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    79   7e-13
dbj|BAD52618.1| hypothetical protein [Oryza sativa Japonica Grou...    66   5e-09
ref|NP_001172309.1| Os01g0327700 [Oryza sativa Japonica Group] g...    66   5e-09
gb|EEC70544.1| hypothetical protein OsI_01685 [Oryza sativa Indi...    66   5e-09

>ref|XP_004135391.1| PREDICTED: uncharacterized protein LOC101209996 [Cucumis sativus]
          Length = 416

 Score = 97.8 bits (242), Expect = 1e-18
 Identities = 59/156 (37%), Positives = 82/156 (52%), Gaps = 6/156 (3%)
 Frame = +1

Query: 127 RRRKQTLGWHRRVKRK---GEDDGVRDWSTLPLALLEEILERVPVLDQLCFGWVCKWWRH 297
           +RR Q     +R KRK   G  +   DW+ LP  +L  I E++ ++D +    VCK W +
Sbjct: 5   KRRNQ----RQRKKRKLENGRGNSTVDWAALPRDVLVMIFEQLSLVDCISVDNVCKLWSN 60

Query: 298 CFVHSRQLDN--KYGVPWLMFCANSDTNTRGCFSVLENRVWELEMPEVRGYYLWGSLHDW 471
                 +L N    G PWLM     D   R C S+LENR+WE+E+ E  G Y+WGS  DW
Sbjct: 61  IL---SELPNWKMGGFPWLMMSGKKDREMRTCASILENRIWEIELHEAYGAYIWGSFQDW 117

Query: 472 LITAQTRSNY-LWIYLFNPFTRVGINLPPVDIIYYK 576
           +I  +    Y L + L NPF+   INLP +   Y+K
Sbjct: 118 VIMVKDLGCYSLEVSLLNPFSVRKINLPRLWNFYHK 153


>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 78.6 bits (192), Expect = 7e-13
 Identities = 47/120 (39%), Positives = 63/120 (52%), Gaps = 1/120 (0%)
 Frame = +1

Query: 196  DWSTLPLALLEEILERV-PVLDQLCFGWVCKWWRHCFVHSRQLDNKYGVPWLMFCANSDT 372
            DWS +P   L+ I E++  V D + FG VCK W   F            PWLM     ++
Sbjct: 921  DWSKMPDDPLKLIAEKLHSVEDYVRFGGVCKSWYSIFEDKECCCPSSKSPWLMLAEKENS 980

Query: 373  NTRGCFSVLENRVWELEMPEVRGYYLWGSLHDWLITAQTRSNYLWIYLFNPFTRVGINLP 552
              RG +S L  +V+E+ +PEV G + WGS + WL+T  T    L + L NP TRV I LP
Sbjct: 981  EIRGFYSPLSGKVYEIRLPEVVGKWCWGSPYGWLVTIGTD---LDMCLLNPLTRVQILLP 1037


>dbj|BAD52618.1| hypothetical protein [Oryza sativa Japonica Group]
           gi|222618326|gb|EEE54458.1| hypothetical protein
           OsJ_01554 [Oryza sativa Japonica Group]
          Length = 425

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
 Frame = +1

Query: 196 DWSTLPLALLEEILERVPVLDQLCFGWVCKWWRHCFVHSRQLDNKYGVPW--LMFCANS- 366
           DWS LP  LL  I   + + D    G VC+ W   F+ +R+L    G P   L+F +   
Sbjct: 26  DWSQLPADLLVHIFGMLDIPDIFSSGVVCRAWCASFLEARRLGICSGNPGPCLVFSSGDR 85

Query: 367 DTNTRGCFSVLENRVWELEMPE--VRGYYLWGSLHDWLITAQTRSNYLWIYLFNPFTRVG 540
           D      +S+   + + + MP+   R  Y+ GS H WLITA  RSN L   L NP T+  
Sbjct: 86  DPTVATLYSLTTGKEYYVTMPDPPFRSRYIVGSSHGWLITADERSNLL---LVNPATQAQ 142

Query: 541 INLPPVDII 567
           I +PP + I
Sbjct: 143 IAMPPPETI 151


>ref|NP_001172309.1| Os01g0327700 [Oryza sativa Japonica Group]
           gi|255673180|dbj|BAH91039.1| Os01g0327700 [Oryza sativa
           Japonica Group]
          Length = 463

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
 Frame = +1

Query: 196 DWSTLPLALLEEILERVPVLDQLCFGWVCKWWRHCFVHSRQLDNKYGVPW--LMFCANS- 366
           DWS LP  LL  I   + + D    G VC+ W   F+ +R+L    G P   L+F +   
Sbjct: 26  DWSQLPADLLVHIFGMLDIPDIFSSGVVCRAWCASFLEARRLGICSGNPGPCLVFSSGDR 85

Query: 367 DTNTRGCFSVLENRVWELEMPE--VRGYYLWGSLHDWLITAQTRSNYLWIYLFNPFTRVG 540
           D      +S+   + + + MP+   R  Y+ GS H WLITA  RSN L   L NP T+  
Sbjct: 86  DPTVATLYSLTTGKEYYVTMPDPPFRSRYIVGSSHGWLITADERSNLL---LVNPATQAQ 142

Query: 541 INLPPVDII 567
           I +PP + I
Sbjct: 143 IAMPPPETI 151


>gb|EEC70544.1| hypothetical protein OsI_01685 [Oryza sativa Indica Group]
          Length = 425

 Score = 65.9 bits (159), Expect = 5e-09
 Identities = 46/129 (35%), Positives = 64/129 (49%), Gaps = 5/129 (3%)
 Frame = +1

Query: 196 DWSTLPLALLEEILERVPVLDQLCFGWVCKWWRHCFVHSRQLDNKYGVPW--LMFCANS- 366
           DWS LP  LL  I   + + D    G VC+ W   F+ +R+L    G P   L+F +   
Sbjct: 26  DWSQLPADLLVHIFGMLDIPDIFSSGVVCRAWCASFLEARRLGICSGNPGPCLVFSSGDR 85

Query: 367 DTNTRGCFSVLENRVWELEMPE--VRGYYLWGSLHDWLITAQTRSNYLWIYLFNPFTRVG 540
           D      +S+   + + + MP+   R  Y+ GS H WLITA  RSN L   L NP T+  
Sbjct: 86  DPTVATLYSLTTGKEYYVTMPDPPFRSRYIVGSSHGWLITADERSNLL---LVNPATQAQ 142

Query: 541 INLPPVDII 567
           I +PP + I
Sbjct: 143 IAMPPPETI 151


Top