BLASTX nr result

ID: Coptis24_contig00013437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013437
         (420 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301235.1| predicted protein [Populus trichocarpa] gi|2...   204   6e-51
gb|ABG37637.1| mago nashi-like protein [Populus trichocarpa]          204   6e-51
gb|ABK93059.1| unknown [Populus trichocarpa] gi|118489017|gb|ABK...   204   8e-51
ref|XP_003604064.1| Mago nashi-like protein [Medicago truncatula...   203   1e-50
gb|AFK48815.1| unknown [Lotus japonicus]                              203   1e-50

>ref|XP_002301235.1| predicted protein [Populus trichocarpa] gi|222842961|gb|EEE80508.1|
           predicted protein [Populus trichocarpa]
          Length = 152

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/121 (79%), Positives = 107/121 (88%)
 Frame = -2

Query: 365 AEENNTQEFYLRYYVGHKGKFGHEFLEFEFKEDGKLRYANNSNYKNDTMIRKEVFLTPSV 186
           A E +  EFYLRYYVGH+GKFGHEFLEFEF+ DGKLRYANNSNYKNDTMIRKEVFLTP+V
Sbjct: 3   ATEGDNGEFYLRYYVGHRGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAV 62

Query: 185 LNEIRHIVEQSEIMKEDDREWPVPDLVGTQELEIVIGNEHISFTTAKIGSLVDVNSSEDP 6
           L E R I+ +SEIMKEDD  WP PD VG QELEIV+GNEHISFTT+KIGSLVDV+SS+DP
Sbjct: 63  LKECRRIISESEIMKEDDNNWPEPDRVGKQELEIVMGNEHISFTTSKIGSLVDVHSSQDP 122

Query: 5   D 3
           +
Sbjct: 123 E 123


>gb|ABG37637.1| mago nashi-like protein [Populus trichocarpa]
          Length = 256

 Score =  204 bits (519), Expect = 6e-51
 Identities = 96/121 (79%), Positives = 107/121 (88%)
 Frame = -2

Query: 365 AEENNTQEFYLRYYVGHKGKFGHEFLEFEFKEDGKLRYANNSNYKNDTMIRKEVFLTPSV 186
           A E +  EFYLRYYVGH+GKFGHEFLEFEF+ DGKLRYANNSNYKNDTMIRKEVFLTP+V
Sbjct: 3   ATEGDNGEFYLRYYVGHRGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAV 62

Query: 185 LNEIRHIVEQSEIMKEDDREWPVPDLVGTQELEIVIGNEHISFTTAKIGSLVDVNSSEDP 6
           L E R I+ +SEIMKEDD  WP PD VG QELEIV+GNEHISFTT+KIGSLVDV+SS+DP
Sbjct: 63  LKECRRIISESEIMKEDDNNWPEPDRVGKQELEIVMGNEHISFTTSKIGSLVDVHSSQDP 122

Query: 5   D 3
           +
Sbjct: 123 E 123


>gb|ABK93059.1| unknown [Populus trichocarpa] gi|118489017|gb|ABK96316.1| unknown
           [Populus trichocarpa x Populus deltoides]
          Length = 152

 Score =  204 bits (518), Expect = 8e-51
 Identities = 96/121 (79%), Positives = 107/121 (88%)
 Frame = -2

Query: 365 AEENNTQEFYLRYYVGHKGKFGHEFLEFEFKEDGKLRYANNSNYKNDTMIRKEVFLTPSV 186
           A E +  EFYLRYYVGH+GKFGHEFLEFEF+ DGKLRYANNSNYKNDTMIRKEVFLTP+V
Sbjct: 3   AMEEDNGEFYLRYYVGHRGKFGHEFLEFEFRPDGKLRYANNSNYKNDTMIRKEVFLTPAV 62

Query: 185 LNEIRHIVEQSEIMKEDDREWPVPDLVGTQELEIVIGNEHISFTTAKIGSLVDVNSSEDP 6
           L E R I+ +SEIMKEDD  WP PD VG QELEIV+GNEHISFTT+KIGSLVDV+SS+DP
Sbjct: 63  LKECRRIISESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVHSSQDP 122

Query: 5   D 3
           +
Sbjct: 123 E 123


>ref|XP_003604064.1| Mago nashi-like protein [Medicago truncatula]
           gi|355493112|gb|AES74315.1| Mago nashi-like protein
           [Medicago truncatula]
          Length = 214

 Score =  203 bits (517), Expect = 1e-50
 Identities = 96/124 (77%), Positives = 105/124 (84%)
 Frame = -2

Query: 374 IKMAEENNTQEFYLRYYVGHKGKFGHEFLEFEFKEDGKLRYANNSNYKNDTMIRKEVFLT 195
           I+M  E    EFYLRYYVGHKGKFGHEFLEFEF+ DGKLRYANNSNYKNDT+IRKEV+LT
Sbjct: 62  IRMGSEEENAEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLT 121

Query: 194 PSVLNEIRHIVEQSEIMKEDDREWPVPDLVGTQELEIVIGNEHISFTTAKIGSLVDVNSS 15
           P+VL E R I+  SEIMKEDD  WP PD VG QELEIV+GNEHISFTT+KIGSLVDV SS
Sbjct: 122 PAVLRECRRIISDSEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSS 181

Query: 14  EDPD 3
            DP+
Sbjct: 182 ADPE 185


>gb|AFK48815.1| unknown [Lotus japonicus]
          Length = 151

 Score =  203 bits (516), Expect = 1e-50
 Identities = 96/122 (78%), Positives = 105/122 (86%)
 Frame = -2

Query: 368 MAEENNTQEFYLRYYVGHKGKFGHEFLEFEFKEDGKLRYANNSNYKNDTMIRKEVFLTPS 189
           MA E    EFYLRYYVGHKGKFGHEFLEFEF+ DGKLRYANNSNYKNDT+IRKEV+LTP+
Sbjct: 1   MATEEENNEFYLRYYVGHKGKFGHEFLEFEFRPDGKLRYANNSNYKNDTIIRKEVYLTPA 60

Query: 188 VLNEIRHIVEQSEIMKEDDREWPVPDLVGTQELEIVIGNEHISFTTAKIGSLVDVNSSED 9
           VL E R I+ +SEIMKEDD  WP PD VG QELEIV+GNEHISFTT+KIGSLVDV SS D
Sbjct: 61  VLRECRRIIAESEIMKEDDNNWPEPDRVGRQELEIVMGNEHISFTTSKIGSLVDVQSSAD 120

Query: 8   PD 3
           P+
Sbjct: 121 PE 122


Top