BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013434
         (971 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2...   270   4e-70
ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi...   267   2e-69
emb|CBI39775.3| unnamed protein product [Vitis vinifera]              262   1e-67
ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi...   262   1e-67
ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi...   229   8e-58

>ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1|
           predicted protein [Populus trichocarpa]
          Length = 514

 Score =  270 bits (690), Expect = 4e-70
 Identities = 125/163 (76%), Positives = 143/163 (87%)
 Frame = -3

Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790
           SN+YA+A RWEDAARVR LM+D+G+KKT GWSSITV+ VVHEFVAGD THPQAE+I + W
Sbjct: 352 SNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIW 411

Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610
            +LL +MK+RGY P T VVLLDM+E +KE  LYRHSEKLAV FGLM TP GTPIRIMKNL
Sbjct: 412 DKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNL 471

Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481
           RVCEDCHAALK+IS IV+REI+VRDRNRFHCF+DG CSCRD+W
Sbjct: 472 RVCEDCHAALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514


>ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 617

 Score =  267 bits (683), Expect = 2e-69
 Identities = 123/163 (75%), Positives = 143/163 (87%)
 Frame = -3

Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790
           SN+YA+AGRWED ARVR LMRD+G+KKTPGWSSI V+ VV+ FVAGD THPQ EEI++ W
Sbjct: 455 SNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTW 514

Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610
           ++LL++MK +GYVP+T VVLLDM+ED+KE  LYRHSEKLAV FGL+ T PGT IRIMKNL
Sbjct: 515 EKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNL 574

Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481
           RVCEDCHAALK+IS +  REIVVRDRNRFHCFK+GSCSC DYW
Sbjct: 575 RVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617


>emb|CBI39775.3| unnamed protein product [Vitis vinifera]
          Length = 599

 Score =  262 bits (669), Expect = 1e-67
 Identities = 118/163 (72%), Positives = 141/163 (86%)
 Frame = -3

Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790
           SN+YA+AGRWED ARVR  M+D+ +KKTPGWSSITVD VVHEFVAG+ +HP  E+I+++W
Sbjct: 437 SNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRW 496

Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610
           +ELLE+M+ +GYVP+T VVLLD++E +K   + RHSEKLA+ FGLMNTP  TPIRIMKNL
Sbjct: 497 EELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNL 556

Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481
           R+CEDCH+A KLIS IVNREIVVRDRNRFHCF D SCSCRDYW
Sbjct: 557 RICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599


>ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520
           [Vitis vinifera]
          Length = 632

 Score =  262 bits (669), Expect = 1e-67
 Identities = 118/163 (72%), Positives = 141/163 (86%)
 Frame = -3

Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790
           SN+YA+AGRWED ARVR  M+D+ +KKTPGWSSITVD VVHEFVAG+ +HP  E+I+++W
Sbjct: 470 SNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRW 529

Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610
           +ELLE+M+ +GYVP+T VVLLD++E +K   + RHSEKLA+ FGLMNTP  TPIRIMKNL
Sbjct: 530 EELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNL 589

Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481
           R+CEDCH+A KLIS IVNREIVVRDRNRFHCF D SCSCRDYW
Sbjct: 590 RICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632


>ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like
            [Cucumis sativus] gi|449529868|ref|XP_004171920.1|
            PREDICTED: pentatricopeptide repeat-containing protein
            At1g08070-like [Cucumis sativus]
          Length = 734

 Score =  229 bits (584), Expect = 8e-58
 Identities = 105/163 (64%), Positives = 130/163 (79%)
 Frame = -3

Query: 969  SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790
            SN+YA AG+W+D AR+R  + D+G+KK PG ++I VDNVVHEF+ GD  HPQ+E+IYR  
Sbjct: 572  SNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRML 631

Query: 789  QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610
            +E+ EQ+K  G+V DT  VL DMDE+ KE  L  HSEKLA++FGL++T PGTPIRI+KNL
Sbjct: 632  EEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNL 691

Query: 609  RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481
            RVC +CH+A KLIS I NREI+ RDRNRFH FKDGSCSC DYW
Sbjct: 692  RVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734