BLASTX nr result
ID: Coptis24_contig00013434
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013434 (971 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|2... 270 4e-70 ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containi... 267 2e-69 emb|CBI39775.3| unnamed protein product [Vitis vinifera] 262 1e-67 ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containi... 262 1e-67 ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containi... 229 8e-58 >ref|XP_002300388.1| predicted protein [Populus trichocarpa] gi|222847646|gb|EEE85193.1| predicted protein [Populus trichocarpa] Length = 514 Score = 270 bits (690), Expect = 4e-70 Identities = 125/163 (76%), Positives = 143/163 (87%) Frame = -3 Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790 SN+YA+A RWEDAARVR LM+D+G+KKT GWSSITV+ VVHEFVAGD THPQAE+I + W Sbjct: 352 SNIYAEAERWEDAARVRKLMKDRGVKKTSGWSSITVNGVVHEFVAGDQTHPQAEDICKIW 411 Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610 +LL +MK+RGY P T VVLLDM+E +KE LYRHSEKLAV FGLM TP GTPIRIMKNL Sbjct: 412 DKLLVKMKRRGYAPKTSVVLLDMEEKEKEKFLYRHSEKLAVVFGLMTTPEGTPIRIMKNL 471 Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481 RVCEDCHAALK+IS IV+REI+VRDRNRFHCF+DG CSCRD+W Sbjct: 472 RVCEDCHAALKIISGIVSREIIVRDRNRFHCFRDGQCSCRDFW 514 >ref|XP_004151248.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like [Cucumis sativus] Length = 617 Score = 267 bits (683), Expect = 2e-69 Identities = 123/163 (75%), Positives = 143/163 (87%) Frame = -3 Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790 SN+YA+AGRWED ARVR LMRD+G+KKTPGWSSI V+ VV+ FVAGD THPQ EEI++ W Sbjct: 455 SNIYAEAGRWEDVARVRKLMRDRGVKKTPGWSSIMVEGVVYNFVAGDDTHPQTEEIFQTW 514 Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610 ++LL++MK +GYVP+T VVLLDM+ED+KE LYRHSEKLAV FGL+ T PGT IRIMKNL Sbjct: 515 EKLLQRMKLKGYVPNTSVVLLDMEEDQKEKFLYRHSEKLAVVFGLIKTTPGTVIRIMKNL 574 Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481 RVCEDCHAALK+IS + REIVVRDRNRFHCFK+GSCSC DYW Sbjct: 575 RVCEDCHAALKIISVVSTREIVVRDRNRFHCFKNGSCSCGDYW 617 >emb|CBI39775.3| unnamed protein product [Vitis vinifera] Length = 599 Score = 262 bits (669), Expect = 1e-67 Identities = 118/163 (72%), Positives = 141/163 (86%) Frame = -3 Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790 SN+YA+AGRWED ARVR M+D+ +KKTPGWSSITVD VVHEFVAG+ +HP E+I+++W Sbjct: 437 SNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRW 496 Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610 +ELLE+M+ +GYVP+T VVLLD++E +K + RHSEKLA+ FGLMNTP TPIRIMKNL Sbjct: 497 EELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNL 556 Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481 R+CEDCH+A KLIS IVNREIVVRDRNRFHCF D SCSCRDYW Sbjct: 557 RICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 599 >ref|XP_002267354.1| PREDICTED: pentatricopeptide repeat-containing protein At5g66520 [Vitis vinifera] Length = 632 Score = 262 bits (669), Expect = 1e-67 Identities = 118/163 (72%), Positives = 141/163 (86%) Frame = -3 Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790 SN+YA+AGRWED ARVR M+D+ +KKTPGWSSITVD VVHEFVAG+ +HP E+I+++W Sbjct: 470 SNIYAEAGRWEDTARVRKFMKDRQVKKTPGWSSITVDGVVHEFVAGEESHPDTEQIFQRW 529 Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610 +ELLE+M+ +GYVP+T VVLLD++E +K + RHSEKLA+ FGLMNTP TPIRIMKNL Sbjct: 530 EELLEEMRLKGYVPNTSVVLLDIEEGEKVKFVSRHSEKLALVFGLMNTPAETPIRIMKNL 589 Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481 R+CEDCH+A KLIS IVNREIVVRDRNRFHCF D SCSCRDYW Sbjct: 590 RICEDCHSAFKLISAIVNREIVVRDRNRFHCFNDNSCSCRDYW 632 >ref|XP_004150015.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] gi|449529868|ref|XP_004171920.1| PREDICTED: pentatricopeptide repeat-containing protein At1g08070-like [Cucumis sativus] Length = 734 Score = 229 bits (584), Expect = 8e-58 Identities = 105/163 (64%), Positives = 130/163 (79%) Frame = -3 Query: 969 SNVYADAGRWEDAARVRMLMRDQGIKKTPGWSSITVDNVVHEFVAGDATHPQAEEIYRKW 790 SN+YA AG+W+D AR+R + D+G+KK PG ++I VDNVVHEF+ GD HPQ+E+IYR Sbjct: 572 SNIYAGAGKWDDVARIRTRLNDRGMKKVPGCTTIEVDNVVHEFLVGDKVHPQSEDIYRML 631 Query: 789 QELLEQMKQRGYVPDTKVVLLDMDEDKKEHVLYRHSEKLAVSFGLMNTPPGTPIRIMKNL 610 +E+ EQ+K G+V DT VL DMDE+ KE L HSEKLA++FGL++T PGTPIRI+KNL Sbjct: 632 EEVDEQLKVFGFVADTSEVLYDMDEEWKEGALSHHSEKLAIAFGLISTKPGTPIRIIKNL 691 Query: 609 RVCEDCHAALKLISDIVNREIVVRDRNRFHCFKDGSCSCRDYW 481 RVC +CH+A KLIS I NREI+ RDRNRFH FKDGSCSC DYW Sbjct: 692 RVCRNCHSATKLISKIFNREIIARDRNRFHHFKDGSCSCNDYW 734