BLASTX nr result
ID: Coptis24_contig00013431
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013431 (1552 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group] g... 619 e-175 gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indi... 617 e-174 emb|CBI32700.3| unnamed protein product [Vitis vinifera] 615 e-174 ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helica... 615 e-174 ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390 [S... 610 e-172 >ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group] gi|143456709|sp|Q5K5B6.2|RH57_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 57 gi|22093706|dbj|BAC07000.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group] gi|23495827|dbj|BAC20037.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group] gi|113612009|dbj|BAF22387.1| Os07g0647900 [Oryza sativa Japonica Group] gi|125601315|gb|EAZ40891.1| hypothetical protein OsJ_25369 [Oryza sativa Japonica Group] Length = 540 Score = 619 bits (1595), Expect = e-175 Identities = 299/397 (75%), Positives = 352/397 (88%) Frame = +1 Query: 4 IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183 IHISG NVP+PL+NF++L SRYGC SYL L++LGF+EPTPIQRQAIP++LSGRECFAC Sbjct: 130 IHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFAC 189 Query: 184 APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363 APTGSGKTLAFLFPILMK++PGSKEG++AVILCPTRELAAQTTREC M Sbjct: 190 APTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAKGRKFYIKLM 249 Query: 364 TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543 T+DL+K+G+F+ MHCDI++STP RL+ A++KR LDLSRVEYLVLDESDKLFELG+V+ ID Sbjct: 250 TKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVID 309 Query: 544 CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723 VVKACSNPSIIRSLFSATLPDS+E LARTIMHDAVRVIVGRKNSAS LI+QKL+FAG+E Sbjct: 310 SVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAGTE 369 Query: 724 YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903 GKL+A+RQ+F+ES NPPVL+FVQS ERAK+LY+ELAF+++R D+IH+DL + QR +AV+ Sbjct: 370 KGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQRQDAVD 429 Query: 904 NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083 N RAGK WVLIAT+VI+RGMDFKGVNCVINYD PESA+AYIHRIGR GRAGR G+AITF+ Sbjct: 430 NLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFF 489 Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194 T+ D FLRNIANV+ +SGCEVPSWI ALPKL+R KH Sbjct: 490 TEEDKPFLRNIANVLISSGCEVPSWIKALPKLKRKKH 526 >gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indica Group] Length = 540 Score = 617 bits (1592), Expect = e-174 Identities = 299/397 (75%), Positives = 352/397 (88%) Frame = +1 Query: 4 IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183 IHISG NVP+PL+NF++L SRYGC SYL L++LGF+EPTPIQRQAIP++LSGRECFAC Sbjct: 130 IHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFAC 189 Query: 184 APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363 APTGSGKTLAFLFPILMK++PGSKEG++AVILCPTRELAAQTTREC M Sbjct: 190 APTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAKGRKFYIKLM 249 Query: 364 TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543 T+DL+K+G+F+ MHCDI+VSTP RL+ A++KR LDLSRVEYLVLDESDKLFELG+V+ ID Sbjct: 250 TKDLSKSGNFKDMHCDILVSTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVID 309 Query: 544 CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723 VVKACSNPSIIRSLFSATLPDS+E LARTIMHDAVRVIVGRKNSAS LI+QKL+FAG+E Sbjct: 310 SVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAGTE 369 Query: 724 YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903 GKL+A+RQ+F+ES NPPVL+FVQS ERAK+LY+ELAF+++R D+IH+DL + QR +AV+ Sbjct: 370 KGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQRQDAVD 429 Query: 904 NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083 N RAG+ WVLIAT+VI+RGMDFKGVNCVINYD PESA+AYIHRIGR GRAGR G+AITF+ Sbjct: 430 NLRAGQTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFF 489 Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194 T+ D FLRNIANV+ +SGCEVPSWI ALPKL+R KH Sbjct: 490 TEEDKPFLRNIANVLISSGCEVPSWIKALPKLKRKKH 526 >emb|CBI32700.3| unnamed protein product [Vitis vinifera] Length = 523 Score = 615 bits (1587), Expect = e-174 Identities = 307/397 (77%), Positives = 347/397 (87%) Frame = +1 Query: 4 IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183 IHISG+NVPSPL+NF +LSSRYGC SYL LAELGFKEPTPIQRQAIPV+LSGRECFAC Sbjct: 111 IHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFAC 170 Query: 184 APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363 APTGSGKTLAF+ P+LMKL+ SK+GIRAVILCPTRELAAQT RE + Sbjct: 171 APTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLL 230 Query: 364 TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543 T++L ++G + CDI++STP RL AIRK+KLDLSRVEYLVLDESDKLFELG VKQID Sbjct: 231 TKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQID 290 Query: 544 CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723 VVKACSNPSIIRSLFSATLPD VEELARTIMHDAVRVI+GRKNSASELI+QKLVFAGSE Sbjct: 291 AVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAGSE 350 Query: 724 YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903 GKL+A+RQ+F+ES NPP+L+FVQS ERAK+LY ELAF++IRVD+IH+DLSQ QR+NAV+ Sbjct: 351 EGKLLALRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQRENAVD 410 Query: 904 NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083 +FRAGK WVLIATDVI+RGMDFKG+NCVINYD P+S AAYIHRIGR GRAGR G+AIT Y Sbjct: 411 DFRAGKTWVLIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTGEAITIY 470 Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194 T+ DV FLRNIANV+AASGCEVPSWIMALPKL+ KH Sbjct: 471 TEDDVPFLRNIANVMAASGCEVPSWIMALPKLKWKKH 507 >ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera] Length = 524 Score = 615 bits (1587), Expect = e-174 Identities = 307/397 (77%), Positives = 347/397 (87%) Frame = +1 Query: 4 IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183 IHISG+NVPSPL+NF +LSSRYGC SYL LAELGFKEPTPIQRQAIPV+LSGRECFAC Sbjct: 112 IHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFAC 171 Query: 184 APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363 APTGSGKTLAF+ P+LMKL+ SK+GIRAVILCPTRELAAQT RE + Sbjct: 172 APTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLL 231 Query: 364 TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543 T++L ++G + CDI++STP RL AIRK+KLDLSRVEYLVLDESDKLFELG VKQID Sbjct: 232 TKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQID 291 Query: 544 CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723 VVKACSNPSIIRSLFSATLPD VEELARTIMHDAVRVI+GRKNSASELI+QKLVFAGSE Sbjct: 292 AVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAGSE 351 Query: 724 YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903 GKL+A+RQ+F+ES NPP+L+FVQS ERAK+LY ELAF++IRVD+IH+DLSQ QR+NAV+ Sbjct: 352 EGKLLALRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQRENAVD 411 Query: 904 NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083 +FRAGK WVLIATDVI+RGMDFKG+NCVINYD P+S AAYIHRIGR GRAGR G+AIT Y Sbjct: 412 DFRAGKTWVLIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTGEAITIY 471 Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194 T+ DV FLRNIANV+AASGCEVPSWIMALPKL+ KH Sbjct: 472 TEDDVPFLRNIANVMAASGCEVPSWIMALPKLKWKKH 508 >ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor] gi|241924516|gb|EER97660.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor] Length = 546 Score = 610 bits (1573), Expect = e-172 Identities = 292/397 (73%), Positives = 350/397 (88%) Frame = +1 Query: 4 IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183 IHI+G N P+PL++F++L SRYGC SYL L++LGF+EPTPIQRQA+P++LSGRECFAC Sbjct: 136 IHIAGQNAPAPLESFEELISRYGCDSYLVGNLSKLGFQEPTPIQRQAMPILLSGRECFAC 195 Query: 184 APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363 APTGSGKTLAFLFP+LMK++PGSK G++AVILCPTRELAAQT REC M Sbjct: 196 APTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPTRELAAQTVRECKKLIKGRKYYIKLM 255 Query: 364 TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543 T++L+K+G+F+ MHCDI+VSTP RL+ A++KR LDLS VEYLVLDESDKLFELG+V+ +D Sbjct: 256 TKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLFELGFVEVVD 315 Query: 544 CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723 VV+ACSNPSIIRSLFSATLPDS+E LARTIMHDA+RVIVGRKNSAS LI+QKL+FAG+E Sbjct: 316 SVVEACSNPSIIRSLFSATLPDSIEALARTIMHDAIRVIVGRKNSASSLIKQKLIFAGTE 375 Query: 724 YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903 GKL+A+RQ+F ES NPPVL+FVQS ERAK+LY+ELAF+++RVD IH+DL++ QR +AV+ Sbjct: 376 RGKLLALRQSFQESLNPPVLIFVQSKERAKELYKELAFDDVRVDAIHADLNEQQRQDAVD 435 Query: 904 NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083 N RAGK WVLIAT+VI+RGMDFKGVNCVINYD PESAAAYIHRIGRCGRAGR G+AITF+ Sbjct: 436 NLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESAAAYIHRIGRCGRAGRFGEAITFF 495 Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194 T+ D FLRNIANV+ +SGCEVPSWIMALPKL+R KH Sbjct: 496 TEEDKPFLRNIANVLVSSGCEVPSWIMALPKLKRKKH 532