BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013431
         (1552 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group] g...   619   e-175
gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indi...   617   e-174
emb|CBI32700.3| unnamed protein product [Vitis vinifera]              615   e-174
ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   615   e-174
ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390 [S...   610   e-172

>ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group]
            gi|143456709|sp|Q5K5B6.2|RH57_ORYSJ RecName:
            Full=DEAD-box ATP-dependent RNA helicase 57
            gi|22093706|dbj|BAC07000.1| putative ATP-dependent RNA
            helicase [Oryza sativa Japonica Group]
            gi|23495827|dbj|BAC20037.1| putative ATP-dependent RNA
            helicase [Oryza sativa Japonica Group]
            gi|113612009|dbj|BAF22387.1| Os07g0647900 [Oryza sativa
            Japonica Group] gi|125601315|gb|EAZ40891.1| hypothetical
            protein OsJ_25369 [Oryza sativa Japonica Group]
          Length = 540

 Score =  619 bits (1595), Expect = e-175
 Identities = 299/397 (75%), Positives = 352/397 (88%)
 Frame = +1

Query: 4    IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183
            IHISG NVP+PL+NF++L SRYGC SYL   L++LGF+EPTPIQRQAIP++LSGRECFAC
Sbjct: 130  IHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFAC 189

Query: 184  APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363
            APTGSGKTLAFLFPILMK++PGSKEG++AVILCPTRELAAQTTREC             M
Sbjct: 190  APTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAKGRKFYIKLM 249

Query: 364  TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543
            T+DL+K+G+F+ MHCDI++STP RL+ A++KR LDLSRVEYLVLDESDKLFELG+V+ ID
Sbjct: 250  TKDLSKSGNFKDMHCDILISTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVID 309

Query: 544  CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723
             VVKACSNPSIIRSLFSATLPDS+E LARTIMHDAVRVIVGRKNSAS LI+QKL+FAG+E
Sbjct: 310  SVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAGTE 369

Query: 724  YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903
             GKL+A+RQ+F+ES NPPVL+FVQS ERAK+LY+ELAF+++R D+IH+DL + QR +AV+
Sbjct: 370  KGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQRQDAVD 429

Query: 904  NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083
            N RAGK WVLIAT+VI+RGMDFKGVNCVINYD PESA+AYIHRIGR GRAGR G+AITF+
Sbjct: 430  NLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFF 489

Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194
            T+ D  FLRNIANV+ +SGCEVPSWI ALPKL+R KH
Sbjct: 490  TEEDKPFLRNIANVLISSGCEVPSWIKALPKLKRKKH 526


>gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indica Group]
          Length = 540

 Score =  617 bits (1592), Expect = e-174
 Identities = 299/397 (75%), Positives = 352/397 (88%)
 Frame = +1

Query: 4    IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183
            IHISG NVP+PL+NF++L SRYGC SYL   L++LGF+EPTPIQRQAIP++LSGRECFAC
Sbjct: 130  IHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGFQEPTPIQRQAIPILLSGRECFAC 189

Query: 184  APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363
            APTGSGKTLAFLFPILMK++PGSKEG++AVILCPTRELAAQTTREC             M
Sbjct: 190  APTGSGKTLAFLFPILMKIKPGSKEGVKAVILCPTRELAAQTTRECKKLAKGRKFYIKLM 249

Query: 364  TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543
            T+DL+K+G+F+ MHCDI+VSTP RL+ A++KR LDLSRVEYLVLDESDKLFELG+V+ ID
Sbjct: 250  TKDLSKSGNFKDMHCDILVSTPLRLDHAVQKRDLDLSRVEYLVLDESDKLFELGFVEVID 309

Query: 544  CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723
             VVKACSNPSIIRSLFSATLPDS+E LARTIMHDAVRVIVGRKNSAS LI+QKL+FAG+E
Sbjct: 310  SVVKACSNPSIIRSLFSATLPDSIETLARTIMHDAVRVIVGRKNSASSLIKQKLIFAGTE 369

Query: 724  YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903
             GKL+A+RQ+F+ES NPPVL+FVQS ERAK+LY+ELAF+++R D+IH+DL + QR +AV+
Sbjct: 370  KGKLLALRQSFAESLNPPVLIFVQSKERAKELYKELAFDDVRADVIHADLDEEQRQDAVD 429

Query: 904  NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083
            N RAG+ WVLIAT+VI+RGMDFKGVNCVINYD PESA+AYIHRIGR GRAGR G+AITF+
Sbjct: 430  NLRAGQTWVLIATEVIARGMDFKGVNCVINYDFPESASAYIHRIGRSGRAGRSGEAITFF 489

Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194
            T+ D  FLRNIANV+ +SGCEVPSWI ALPKL+R KH
Sbjct: 490  TEEDKPFLRNIANVLISSGCEVPSWIKALPKLKRKKH 526


>emb|CBI32700.3| unnamed protein product [Vitis vinifera]
          Length = 523

 Score =  615 bits (1587), Expect = e-174
 Identities = 307/397 (77%), Positives = 347/397 (87%)
 Frame = +1

Query: 4    IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183
            IHISG+NVPSPL+NF +LSSRYGC SYL   LAELGFKEPTPIQRQAIPV+LSGRECFAC
Sbjct: 111  IHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFAC 170

Query: 184  APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363
            APTGSGKTLAF+ P+LMKL+  SK+GIRAVILCPTRELAAQT RE              +
Sbjct: 171  APTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLL 230

Query: 364  TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543
            T++L ++G    + CDI++STP RL  AIRK+KLDLSRVEYLVLDESDKLFELG VKQID
Sbjct: 231  TKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQID 290

Query: 544  CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723
             VVKACSNPSIIRSLFSATLPD VEELARTIMHDAVRVI+GRKNSASELI+QKLVFAGSE
Sbjct: 291  AVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAGSE 350

Query: 724  YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903
             GKL+A+RQ+F+ES NPP+L+FVQS ERAK+LY ELAF++IRVD+IH+DLSQ QR+NAV+
Sbjct: 351  EGKLLALRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQRENAVD 410

Query: 904  NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083
            +FRAGK WVLIATDVI+RGMDFKG+NCVINYD P+S AAYIHRIGR GRAGR G+AIT Y
Sbjct: 411  DFRAGKTWVLIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTGEAITIY 470

Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194
            T+ DV FLRNIANV+AASGCEVPSWIMALPKL+  KH
Sbjct: 471  TEDDVPFLRNIANVMAASGCEVPSWIMALPKLKWKKH 507


>ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera]
          Length = 524

 Score =  615 bits (1587), Expect = e-174
 Identities = 307/397 (77%), Positives = 347/397 (87%)
 Frame = +1

Query: 4    IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183
            IHISG+NVPSPL+NF +LSSRYGC SYL   LAELGFKEPTPIQRQAIPV+LSGRECFAC
Sbjct: 112  IHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECFAC 171

Query: 184  APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363
            APTGSGKTLAF+ P+LMKL+  SK+GIRAVILCPTRELAAQT RE              +
Sbjct: 172  APTGSGKTLAFVCPMLMKLKHASKDGIRAVILCPTRELAAQTARESKKLAKGKKFYIKLL 231

Query: 364  TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543
            T++L ++G    + CDI++STP RL  AIRK+KLDLSRVEYLVLDESDKLFELG VKQID
Sbjct: 232  TKELLRSGDISKLPCDILISTPLRLRSAIRKKKLDLSRVEYLVLDESDKLFELGLVKQID 291

Query: 544  CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723
             VVKACSNPSIIRSLFSATLPD VEELARTIMHDAVRVI+GRKNSASELI+QKLVFAGSE
Sbjct: 292  AVVKACSNPSIIRSLFSATLPDFVEELARTIMHDAVRVIIGRKNSASELIKQKLVFAGSE 351

Query: 724  YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903
             GKL+A+RQ+F+ES NPP+L+FVQS ERAK+LY ELAF++IRVD+IH+DLSQ QR+NAV+
Sbjct: 352  EGKLLALRQSFAESLNPPILLFVQSKERAKELYTELAFDDIRVDVIHADLSQSQRENAVD 411

Query: 904  NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083
            +FRAGK WVLIATDVI+RGMDFKG+NCVINYD P+S AAYIHRIGR GRAGR G+AIT Y
Sbjct: 412  DFRAGKTWVLIATDVIARGMDFKGINCVINYDFPDSPAAYIHRIGRSGRAGRTGEAITIY 471

Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194
            T+ DV FLRNIANV+AASGCEVPSWIMALPKL+  KH
Sbjct: 472  TEDDVPFLRNIANVMAASGCEVPSWIMALPKLKWKKH 508


>ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
            gi|241924516|gb|EER97660.1| hypothetical protein
            SORBIDRAFT_02g041390 [Sorghum bicolor]
          Length = 546

 Score =  610 bits (1573), Expect = e-172
 Identities = 292/397 (73%), Positives = 350/397 (88%)
 Frame = +1

Query: 4    IHISGHNVPSPLQNFDDLSSRYGCTSYLFAKLAELGFKEPTPIQRQAIPVILSGRECFAC 183
            IHI+G N P+PL++F++L SRYGC SYL   L++LGF+EPTPIQRQA+P++LSGRECFAC
Sbjct: 136  IHIAGQNAPAPLESFEELISRYGCDSYLVGNLSKLGFQEPTPIQRQAMPILLSGRECFAC 195

Query: 184  APTGSGKTLAFLFPILMKLQPGSKEGIRAVILCPTRELAAQTTRECXXXXXXXXXXXXXM 363
            APTGSGKTLAFLFP+LMK++PGSK G++AVILCPTRELAAQT REC             M
Sbjct: 196  APTGSGKTLAFLFPLLMKIKPGSKGGVKAVILCPTRELAAQTVRECKKLIKGRKYYIKLM 255

Query: 364  TRDLAKNGSFQTMHCDIIVSTPFRLEFAIRKRKLDLSRVEYLVLDESDKLFELGYVKQID 543
            T++L+K+G+F+ MHCDI+VSTP RL+ A++KR LDLS VEYLVLDESDKLFELG+V+ +D
Sbjct: 256  TKELSKSGNFKDMHCDILVSTPLRLDHAVKKRDLDLSSVEYLVLDESDKLFELGFVEVVD 315

Query: 544  CVVKACSNPSIIRSLFSATLPDSVEELARTIMHDAVRVIVGRKNSASELIEQKLVFAGSE 723
             VV+ACSNPSIIRSLFSATLPDS+E LARTIMHDA+RVIVGRKNSAS LI+QKL+FAG+E
Sbjct: 316  SVVEACSNPSIIRSLFSATLPDSIEALARTIMHDAIRVIVGRKNSASSLIKQKLIFAGTE 375

Query: 724  YGKLIAIRQTFSESWNPPVLVFVQSIERAKQLYQELAFENIRVDIIHSDLSQIQRDNAVE 903
             GKL+A+RQ+F ES NPPVL+FVQS ERAK+LY+ELAF+++RVD IH+DL++ QR +AV+
Sbjct: 376  RGKLLALRQSFQESLNPPVLIFVQSKERAKELYKELAFDDVRVDAIHADLNEQQRQDAVD 435

Query: 904  NFRAGKKWVLIATDVISRGMDFKGVNCVINYDLPESAAAYIHRIGRCGRAGRVGQAITFY 1083
            N RAGK WVLIAT+VI+RGMDFKGVNCVINYD PESAAAYIHRIGRCGRAGR G+AITF+
Sbjct: 436  NLRAGKTWVLIATEVIARGMDFKGVNCVINYDFPESAAAYIHRIGRCGRAGRFGEAITFF 495

Query: 1084 TDTDVKFLRNIANVIAASGCEVPSWIMALPKLRRTKH 1194
            T+ D  FLRNIANV+ +SGCEVPSWIMALPKL+R KH
Sbjct: 496  TEEDKPFLRNIANVLVSSGCEVPSWIMALPKLKRKKH 532