BLASTX nr result
ID: Coptis24_contig00013419
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013419 (1342 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value gb|ABK95981.1| unknown [Populus trichocarpa] 348 2e-93 ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|2... 342 1e-91 ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis ... 337 4e-90 ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|2... 334 3e-89 ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] ... 328 2e-87 >gb|ABK95981.1| unknown [Populus trichocarpa] Length = 243 Score = 348 bits (893), Expect = 2e-93 Identities = 152/237 (64%), Positives = 182/237 (76%) Frame = +2 Query: 227 SSMELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVG 406 S+M+L GA D EH++ R++HELWPL+ +D K A PCCL+WTPLPVVSWLAPFIGHVG Sbjct: 7 SAMDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVG 66 Query: 407 ICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGA 586 ICREDGTILDF+GSNFV+V+DF+FGA ARY LDREQCCF PNL+GHTCKH YKH E+G Sbjct: 67 ICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQCCFPPNLTGHTCKHGYKHSEYGT 126 Query: 587 AMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGH 766 A++WDDAL SMRHF+HK+YNLFTCNCHS+VANCLNRLCYGG++ WNM++VA LIL KGH Sbjct: 127 AITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILFKGH 186 Query: 767 WVGSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937 W+ S+VRSF PF LC+G+ +V TYC K LL+C Sbjct: 187 WIDWKSIVRSFLPFAVALCIGVCLVGWPFLVGLFSFSLLLMGWFLLGTYCFKSLLEC 243 >ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|222866198|gb|EEF03329.1| predicted protein [Populus trichocarpa] Length = 239 Score = 342 bits (877), Expect = 1e-91 Identities = 152/239 (63%), Positives = 181/239 (75%), Gaps = 4/239 (1%) Frame = +2 Query: 233 MELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVGIC 412 M+L GA D EH++ R++HELWPL+ +D K A PCCL+WTPLPVVSWLAPFIGHVGIC Sbjct: 1 MDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60 Query: 413 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ----CCFSPNLSGHTCKHAYKHMEH 580 REDGTILDF+GSNFV+V+DF+FGA ARY LDREQ CCF PNL+GHTCKH YKH E+ Sbjct: 61 REDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQGTGQCCFPPNLTGHTCKHGYKHSEY 120 Query: 581 GAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSK 760 G A++WDDAL SMRHF+HK+YNLFTCNCHS+VANCLNRLCYGG++ WNM++VA LIL K Sbjct: 121 GTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILFK 180 Query: 761 GHWVGSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937 GHW+ S+VRSF PF VLC+G+ +V TYC K LL+C Sbjct: 181 GHWIDWKSIVRSFLPFAVVLCIGVCLVGWPFLVGLFSFSLLLMGWFLLGTYCFKSLLEC 239 >ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis vinifera] gi|296081665|emb|CBI20670.3| unnamed protein product [Vitis vinifera] Length = 243 Score = 337 bits (864), Expect = 4e-90 Identities = 155/235 (65%), Positives = 176/235 (74%) Frame = +2 Query: 233 MELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVGIC 412 MEL D E ++ RR +HELWPL+ +D K A LPCCLVWTPLPVVSWLAPFIGHVGIC Sbjct: 9 MELNAINDVEDMSTARRTQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAPFIGHVGIC 68 Query: 413 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 592 REDG ILDFAGSNFV+VNDFAFGAVARYL LDRE+CCF PNL+GHTCK+ YKH E+G A+ Sbjct: 69 REDGAILDFAGSNFVNVNDFAFGAVARYLQLDREKCCFPPNLAGHTCKNGYKHAENGTAV 128 Query: 593 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 772 +WDDAL S HF HKSYNLFTCNCHS+VANCLNRL YGG++ WNM+NV ALIL KG WV Sbjct: 129 TWDDALLSSSHHFGHKSYNLFTCNCHSFVANCLNRLAYGGSMGWNMINVCALILFKGRWV 188 Query: 773 GSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937 SMS+ RSF PF+ VLCLG+ M TYC K +L+C Sbjct: 189 DSMSIFRSFSPFMLVLCLGVFMAGWPFLIGLLSFSLLLIGWFLLGTYCFKNVLEC 243 >ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|222854541|gb|EEE92088.1| predicted protein [Populus trichocarpa] Length = 235 Score = 334 bits (857), Expect = 3e-89 Identities = 147/235 (62%), Positives = 177/235 (75%) Frame = +2 Query: 233 MELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVGIC 412 M+L GA D EH++ R++H+LWPL+ +D K A PCCL+WTPLPVVSWLAPFIGHVGIC Sbjct: 1 MDLKGAFDVEHMSSTSRIQHDLWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60 Query: 413 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 592 REDGTILDF+GSN V+V+DF FGA ARYL LDREQCCF PNL+GHTCKH YKH E+G A+ Sbjct: 61 REDGTILDFSGSNSVNVDDFTFGAAARYLQLDREQCCFPPNLAGHTCKHGYKHSEYGTAI 120 Query: 593 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 772 +WDDAL S R FEHK+YNLFTCNCHS+VA+CLNR CYGG++ WN+++VA LIL KGHW+ Sbjct: 121 TWDDALQSSTRSFEHKTYNLFTCNCHSFVAHCLNRFCYGGSMDWNLIDVAVLILFKGHWI 180 Query: 773 GSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937 S+++SF PF VLCLGI +V TYC K LL+C Sbjct: 181 DWKSIIKSFLPFTIVLCLGIVLVGWPFLVGLFSFTLLLMGWFLLGTYCFKSLLEC 235 >ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] gi|217072464|gb|ACJ84592.1| unknown [Medicago truncatula] gi|355478063|gb|AES59266.1| Transmembrane protein [Medicago truncatula] gi|388520819|gb|AFK48471.1| unknown [Medicago truncatula] Length = 236 Score = 328 bits (841), Expect = 2e-87 Identities = 149/235 (63%), Positives = 173/235 (73%) Frame = +2 Query: 233 MELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVGIC 412 MEL + D E + ++M H+LWPL+ +D K A PCCLVW PLPVVSWLAPFIGHVGIC Sbjct: 2 MELNASYDIEQLRPKKKMEHDLWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGIC 61 Query: 413 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 592 REDGT+LDF+GS V+V+DFAFG VARYL+LDR QCCF PNLSGHTCKH Y+H E+G A+ Sbjct: 62 REDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQCCFPPNLSGHTCKHGYRHTEYGTAI 121 Query: 593 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 772 +WDDAL S+RHFE K+YNLFTCNCHS+VAN LNRLCYGG++ WNMVNV LIL KGHWV Sbjct: 122 TWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNRLCYGGSMSWNMVNVGILILFKGHWV 181 Query: 773 GSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937 SVVRSF PFV V+C+GI MV TY K LL+C Sbjct: 182 DFWSVVRSFLPFVVVVCVGIFMVGWPFLLGLLSFSLLLIGWFLLGTYLVKSLLEC 236