BLASTX nr result

ID: Coptis24_contig00013419 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013419
         (1342 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95981.1| unknown [Populus trichocarpa]                          348   2e-93
ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|2...   342   1e-91
ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis ...   337   4e-90
ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|2...   334   3e-89
ref|XP_003589015.1| Transmembrane protein [Medicago truncatula] ...   328   2e-87

>gb|ABK95981.1| unknown [Populus trichocarpa]
          Length = 243

 Score =  348 bits (893), Expect = 2e-93
 Identities = 152/237 (64%), Positives = 182/237 (76%)
 Frame = +2

Query: 227 SSMELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVG 406
           S+M+L GA D EH++   R++HELWPL+ +D K A  PCCL+WTPLPVVSWLAPFIGHVG
Sbjct: 7   SAMDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVG 66

Query: 407 ICREDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGA 586
           ICREDGTILDF+GSNFV+V+DF+FGA ARY  LDREQCCF PNL+GHTCKH YKH E+G 
Sbjct: 67  ICREDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQCCFPPNLTGHTCKHGYKHSEYGT 126

Query: 587 AMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGH 766
           A++WDDAL  SMRHF+HK+YNLFTCNCHS+VANCLNRLCYGG++ WNM++VA LIL KGH
Sbjct: 127 AITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILFKGH 186

Query: 767 WVGSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937
           W+   S+VRSF PF   LC+G+ +V                      TYC K LL+C
Sbjct: 187 WIDWKSIVRSFLPFAVALCIGVCLVGWPFLVGLFSFSLLLMGWFLLGTYCFKSLLEC 243


>ref|XP_002324764.1| predicted protein [Populus trichocarpa] gi|222866198|gb|EEF03329.1|
           predicted protein [Populus trichocarpa]
          Length = 239

 Score =  342 bits (877), Expect = 1e-91
 Identities = 152/239 (63%), Positives = 181/239 (75%), Gaps = 4/239 (1%)
 Frame = +2

Query: 233 MELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVGIC 412
           M+L GA D EH++   R++HELWPL+ +D K A  PCCL+WTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAYDVEHMSSTSRIQHELWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 413 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQ----CCFSPNLSGHTCKHAYKHMEH 580
           REDGTILDF+GSNFV+V+DF+FGA ARY  LDREQ    CCF PNL+GHTCKH YKH E+
Sbjct: 61  REDGTILDFSGSNFVNVDDFSFGAAARYFQLDREQGTGQCCFPPNLTGHTCKHGYKHSEY 120

Query: 581 GAAMSWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSK 760
           G A++WDDAL  SMRHF+HK+YNLFTCNCHS+VANCLNRLCYGG++ WNM++VA LIL K
Sbjct: 121 GTAITWDDALQSSMRHFDHKTYNLFTCNCHSFVANCLNRLCYGGSMDWNMIDVAVLILFK 180

Query: 761 GHWVGSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937
           GHW+   S+VRSF PF  VLC+G+ +V                      TYC K LL+C
Sbjct: 181 GHWIDWKSIVRSFLPFAVVLCIGVCLVGWPFLVGLFSFSLLLMGWFLLGTYCFKSLLEC 239


>ref|XP_002279831.1| PREDICTED: transmembrane protein 222 [Vitis vinifera]
           gi|296081665|emb|CBI20670.3| unnamed protein product
           [Vitis vinifera]
          Length = 243

 Score =  337 bits (864), Expect = 4e-90
 Identities = 155/235 (65%), Positives = 176/235 (74%)
 Frame = +2

Query: 233 MELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVGIC 412
           MEL    D E ++  RR +HELWPL+ +D K A LPCCLVWTPLPVVSWLAPFIGHVGIC
Sbjct: 9   MELNAINDVEDMSTARRTQHELWPLDEIDPKKAKLPCCLVWTPLPVVSWLAPFIGHVGIC 68

Query: 413 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 592
           REDG ILDFAGSNFV+VNDFAFGAVARYL LDRE+CCF PNL+GHTCK+ YKH E+G A+
Sbjct: 69  REDGAILDFAGSNFVNVNDFAFGAVARYLQLDREKCCFPPNLAGHTCKNGYKHAENGTAV 128

Query: 593 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 772
           +WDDAL  S  HF HKSYNLFTCNCHS+VANCLNRL YGG++ WNM+NV ALIL KG WV
Sbjct: 129 TWDDALLSSSHHFGHKSYNLFTCNCHSFVANCLNRLAYGGSMGWNMINVCALILFKGRWV 188

Query: 773 GSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937
            SMS+ RSF PF+ VLCLG+ M                       TYC K +L+C
Sbjct: 189 DSMSIFRSFSPFMLVLCLGVFMAGWPFLIGLLSFSLLLIGWFLLGTYCFKNVLEC 243


>ref|XP_002308565.1| predicted protein [Populus trichocarpa] gi|222854541|gb|EEE92088.1|
           predicted protein [Populus trichocarpa]
          Length = 235

 Score =  334 bits (857), Expect = 3e-89
 Identities = 147/235 (62%), Positives = 177/235 (75%)
 Frame = +2

Query: 233 MELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVGIC 412
           M+L GA D EH++   R++H+LWPL+ +D K A  PCCL+WTPLPVVSWLAPFIGHVGIC
Sbjct: 1   MDLKGAFDVEHMSSTSRIQHDLWPLDGIDPKKAKFPCCLIWTPLPVVSWLAPFIGHVGIC 60

Query: 413 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 592
           REDGTILDF+GSN V+V+DF FGA ARYL LDREQCCF PNL+GHTCKH YKH E+G A+
Sbjct: 61  REDGTILDFSGSNSVNVDDFTFGAAARYLQLDREQCCFPPNLAGHTCKHGYKHSEYGTAI 120

Query: 593 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 772
           +WDDAL  S R FEHK+YNLFTCNCHS+VA+CLNR CYGG++ WN+++VA LIL KGHW+
Sbjct: 121 TWDDALQSSTRSFEHKTYNLFTCNCHSFVAHCLNRFCYGGSMDWNLIDVAVLILFKGHWI 180

Query: 773 GSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937
              S+++SF PF  VLCLGI +V                      TYC K LL+C
Sbjct: 181 DWKSIIKSFLPFTIVLCLGIVLVGWPFLVGLFSFTLLLMGWFLLGTYCFKSLLEC 235


>ref|XP_003589015.1| Transmembrane protein [Medicago truncatula]
           gi|217072464|gb|ACJ84592.1| unknown [Medicago
           truncatula] gi|355478063|gb|AES59266.1| Transmembrane
           protein [Medicago truncatula]
           gi|388520819|gb|AFK48471.1| unknown [Medicago
           truncatula]
          Length = 236

 Score =  328 bits (841), Expect = 2e-87
 Identities = 149/235 (63%), Positives = 173/235 (73%)
 Frame = +2

Query: 233 MELTGAGDFEHINRDRRMRHELWPLNAVDSKMACLPCCLVWTPLPVVSWLAPFIGHVGIC 412
           MEL  + D E +   ++M H+LWPL+ +D K A  PCCLVW PLPVVSWLAPFIGHVGIC
Sbjct: 2   MELNASYDIEQLRPKKKMEHDLWPLDPIDPKNAKFPCCLVWNPLPVVSWLAPFIGHVGIC 61

Query: 413 REDGTILDFAGSNFVHVNDFAFGAVARYLDLDREQCCFSPNLSGHTCKHAYKHMEHGAAM 592
           REDGT+LDF+GS  V+V+DFAFG VARYL+LDR QCCF PNLSGHTCKH Y+H E+G A+
Sbjct: 62  REDGTVLDFSGSYCVNVDDFAFGPVARYLELDRRQCCFPPNLSGHTCKHGYRHTEYGTAI 121

Query: 593 SWDDALNLSMRHFEHKSYNLFTCNCHSYVANCLNRLCYGGNLKWNMVNVAALILSKGHWV 772
           +WDDAL  S+RHFE K+YNLFTCNCHS+VAN LNRLCYGG++ WNMVNV  LIL KGHWV
Sbjct: 122 TWDDALRTSLRHFESKTYNLFTCNCHSFVANSLNRLCYGGSMSWNMVNVGILILFKGHWV 181

Query: 773 GSMSVVRSFFPFVAVLCLGISMVXXXXXXXXXXXXXXXXXXXXXXTYCAKGLLQC 937
              SVVRSF PFV V+C+GI MV                      TY  K LL+C
Sbjct: 182 DFWSVVRSFLPFVVVVCVGIFMVGWPFLLGLLSFSLLLIGWFLLGTYLVKSLLEC 236


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