BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013418
         (745 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]            99   4e-28
dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like ...    99   4e-28
gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]        93   5e-27
ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...   110   5e-27
gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transc...    97   3e-25

>dbj|BAF01687.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1072

 Score = 99.4 bits (246), Expect(2) = 4e-28
 Identities = 52/155 (33%), Positives = 82/155 (52%)
 Frame = +3

Query: 267  KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 446
            ++ SW ++ LS AGR  LI SV      +   TF+LP+G + K+  +C+KFL +GS  G+
Sbjct: 649  RLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGR 708

Query: 447  NMHQSSRENIQYPKMEGGLGIQDPIIWNRTAYCGLIYKLAGKDSGLWITWNWAEHIKEKN 626
               + S  +   PK EGGLG +    WN+T    LI+ L  +D+ LW  W     +   +
Sbjct: 709  KSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHAS 768

Query: 627  FWTMSVPRDCSWPWRCILNNRKTAMKLLRYSISTG 731
            FW ++  +   W W+ +LN R  A K ++  +  G
Sbjct: 769  FWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNG 803



 Score = 51.6 bits (122), Expect(2) = 4e-28
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
 Frame = +1

Query: 1   LCFADDVLIFIQGYEDSIWGLKLILDDFS--RGYRSAAEPKQIYHQDGSHLGHIL----- 159
           L FADDV+IF  G   S+ G+   LDDF+   G +   +  Q++ Q G  L   +     
Sbjct: 555 LMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLF-QAGLDLSERITSAAY 613

Query: 160 GMQVVSPPVKYLGLPLVSARISIKDCLPLIEK 255
           G    + P++YLGLPL+  ++ I D  PL+EK
Sbjct: 614 GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEK 645


>dbj|BAA97290.1| non-LTR retroelement reverse transcriptase-like [Arabidopsis
            thaliana]
          Length = 1072

 Score = 99.4 bits (246), Expect(2) = 4e-28
 Identities = 52/155 (33%), Positives = 82/155 (52%)
 Frame = +3

Query: 267  KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 446
            ++ SW ++ LS AGR  LI SV      +   TF+LP+G + K+  +C+KFL +GS  G+
Sbjct: 649  RLRSWVSKALSFAGRTQLISSVIFGLINFWMSTFLLPKGCIKKIESLCSKFLWAGSIDGR 708

Query: 447  NMHQSSRENIQYPKMEGGLGIQDPIIWNRTAYCGLIYKLAGKDSGLWITWNWAEHIKEKN 626
               + S  +   PK EGGLG +    WN+T    LI+ L  +D+ LW  W     +   +
Sbjct: 709  KSSKVSWVDCCLPKSEGGLGFRSFGEWNKTLLLRLIWVLFDRDTSLWAQWQRHHRLGHAS 768

Query: 627  FWTMSVPRDCSWPWRCILNNRKTAMKLLRYSISTG 731
            FW ++  +   W W+ +LN R  A K ++  +  G
Sbjct: 769  FWQVNALQTDPWTWKMLLNLRPLAEKFIKAKVGNG 803



 Score = 51.6 bits (122), Expect(2) = 4e-28
 Identities = 34/92 (36%), Positives = 50/92 (54%), Gaps = 7/92 (7%)
 Frame = +1

Query: 1   LCFADDVLIFIQGYEDSIWGLKLILDDFS--RGYRSAAEPKQIYHQDGSHLGHIL----- 159
           L FADDV+IF  G   S+ G+   LDDF+   G +   +  Q++ Q G  L   +     
Sbjct: 555 LMFADDVMIFFDGGSSSMHGICETLDDFADWSGLKVNKDKSQLF-QAGLDLSERITSAAY 613

Query: 160 GMQVVSPPVKYLGLPLVSARISIKDCLPLIEK 255
           G    + P++YLGLPL+  ++ I D  PL+EK
Sbjct: 614 GFPAGTFPIRYLGLPLMCRKLRIADYGPLLEK 645


>gb|AAG50806.1|AC079281_8 unknown protein [Arabidopsis thaliana]
          Length = 1213

 Score = 92.8 bits (229), Expect(2) = 5e-27
 Identities = 50/155 (32%), Positives = 80/155 (51%)
 Frame = +3

Query: 267  KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 446
            +  SW N+ LS AGR+ LI SV      +   TF+LP+G + ++  +C++FL SG+    
Sbjct: 789  RFRSWVNKCLSFAGRIQLISSVIFGSINFWMSTFLLPKGCIKRIESLCSRFLWSGNIEQA 848

Query: 447  NMHQSSRENIQYPKMEGGLGIQDPIIWNRTAYCGLIYKLAGKDSGLWITWNWAEHIKEKN 626
               + S   +  PK EGGLG++  + WN+T    LI++L      LW  W    H+   +
Sbjct: 849  KGIKVSWAALCLPKSEGGLGLRRLLEWNKTLSMRLIWRLFVAKDSLWADWQHLHHLSRGS 908

Query: 627  FWTMSVPRDCSWPWRCILNNRKTAMKLLRYSISTG 731
            FW +   +  SW W+ +L+ R  A + L   +  G
Sbjct: 909  FWAVEGGQSDSWTWKRLLSLRPLAHQFLVCKVGNG 943



 Score = 54.7 bits (130), Expect(2) = 5e-27
 Identities = 33/93 (35%), Positives = 52/93 (55%), Gaps = 6/93 (6%)
 Frame = +1

Query: 1   LCFADDVLIFIQGYEDSIWGLKLILDDFSR--GYRSAAEPKQIY----HQDGSHLGHILG 162
           L FADDV+IF  G   S+ G+   LDDF+   G +   +   +Y    +Q  S+     G
Sbjct: 695 LMFADDVMIFFDGGSFSLHGICETLDDFASWSGLKVNKDKSHLYLAGLNQLESNANAAYG 754

Query: 163 MQVVSPPVKYLGLPLVSARISIKDCLPLIEKTT 261
             + + P++YLGLPL++ ++ I +  PL+EK T
Sbjct: 755 FPIGTLPIRYLGLPLMNRKLRIAEYEPLLEKIT 787


>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score =  110 bits (276), Expect(2) = 5e-27
 Identities = 63/159 (39%), Positives = 85/159 (53%), Gaps = 1/159 (0%)
 Frame = +3

Query: 267 KVESWKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGK 446
           KV  W  R LS+AGR+ LI SV  S  +Y A  F+LP  V+  V QI   FL SGS M  
Sbjct: 83  KVRHWTCRTLSYAGRVQLINSVLFSIQVYWASLFLLPGQVIKNVEQIMKSFLWSGSDMRT 142

Query: 447 NMHQSSRENIQYPKMEGGLGIQDPIIWNRTAYCGLIYKLAG-KDSGLWITWNWAEHIKEK 623
              + + + +  PK EGGLGI+    WN+ A    I+ L    D  +W TW  +  ++ +
Sbjct: 143 TGAKVAWDQVCLPKKEGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGR 202

Query: 624 NFWTMSVPRDCSWPWRCILNNRKTAMKLLRYSISTGDQT 740
           NFWT+  P++CSW W  IL  R  A   ++Y I  G  T
Sbjct: 203 NFWTIKTPQNCSWAWGKILKLRSLAWPKMKYIIGDGMTT 241



 Score = 36.6 bits (83), Expect(2) = 5e-27
 Identities = 16/37 (43%), Positives = 25/37 (67%)
 Frame = +1

Query: 151 HILGMQVVSPPVKYLGLPLVSARISIKDCLPLIEKTT 261
           HILG +    P+KYLG+PL+S+R+    C  L+++ T
Sbjct: 45  HILGFREGELPMKYLGVPLLSSRLKAIYCKGLVDRIT 81


>gb|AAM82604.1|AF525305_2 putative AP endonuclease/reverse transcriptase [Brassica napus]
          Length = 1214

 Score = 97.4 bits (241), Expect(2) = 3e-25
 Identities = 54/151 (35%), Positives = 77/151 (50%)
 Frame = +3

Query: 279  WKNRFLSHAGRL*LIISVQASFHIY*AKTFILPQGVLIKVAQICAKFL*SGSQMGKNMHQ 458
            W  + LS AGRL LI SV  S   +   +FILP+  L  + Q+C +FL       +   +
Sbjct: 792  WATKTLSFAGRLQLISSVIYSTVNFWLSSFILPKCCLKTIEQMCNRFLWGNDITRRGDIK 851

Query: 459  SSRENIQYPKMEGGLGIQDPIIWNRTAYCGLIYKLAGKDSGLWITWNWAEHIKEKNFWTM 638
             S +N   PK EGGLG+++   WN+T    LI+ L  +   LW+ WN A  ++  NFW  
Sbjct: 852  VSWQNSCLPKAEGGLGLRNFWTWNKTLNLRLIWMLFARRDSLWVAWNHANRLRHVNFWNA 911

Query: 639  SVPRDCSWPWRCILNNRKTAMKLLRYSISTG 731
                  SW W+ IL  R  A + LR ++  G
Sbjct: 912  EAASHHSWIWKAILGLRPLAKRFLRGAVGNG 942



 Score = 43.9 bits (102), Expect(2) = 3e-25
 Identities = 30/95 (31%), Positives = 45/95 (47%), Gaps = 10/95 (10%)
 Frame = +1

Query: 1   LCFADDVLIFIQGYEDSIWGLKLILDDFSR--GYRSAAEPKQIY--------HQDGSHLG 150
           L FADD++IF  G   S+ G+K +L+ F    G     E   +Y         +D    G
Sbjct: 694 LAFADDLMIFYDGKASSLRGIKSVLESFKNLSGLEMNTEKSAVYTAGLEDTDKEDTLAFG 753

Query: 151 HILGMQVVSPPVKYLGLPLVSARISIKDCLPLIEK 255
            + G    + P +YLGLPL+  ++   D   LI+K
Sbjct: 754 FVNG----TFPFRYLGLPLLHRKLRRSDYSQLIDK 784