BLASTX nr result

ID: Coptis24_contig00013415 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013415
         (730 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002278537.1| PREDICTED: ubiquitin-related modifier 1 homo...   147   2e-33
emb|CAN82245.1| hypothetical protein VITISV_018251 [Vitis vinifera]   147   2e-33
ref|NP_001118872.1| ubiquitin-related modifier 1-2 [Arabidopsis ...   147   2e-33
ref|XP_002511777.1| Protein C9orf74, putative [Ricinus communis]...   146   4e-33
ref|XP_002878362.1| predicted protein [Arabidopsis lyrata subsp....   146   5e-33

>ref|XP_002278537.1| PREDICTED: ubiquitin-related modifier 1 homolog 2 isoform 1 [Vitis
           vinifera] gi|296089135|emb|CBI38838.3| unnamed protein
           product [Vitis vinifera]
          Length = 99

 Score =  147 bits (372), Expect = 2e-33
 Identities = 72/83 (86%), Positives = 77/83 (92%)
 Frame = -1

Query: 607 SVKIHNVDVTLKAEENKLTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWEL 428
           SVKIH+V+V  +  E KLTMKDLLSWVR NLIKERPEMFMKGD+VRPGVLVLVNDCDWEL
Sbjct: 17  SVKIHSVNVDPQVGEEKLTMKDLLSWVRANLIKERPEMFMKGDSVRPGVLVLVNDCDWEL 76

Query: 427 SGQLETTLEEKDVIVFISTLHGG 359
           SGQL+TTLEEKDVIVFISTLHGG
Sbjct: 77  SGQLDTTLEEKDVIVFISTLHGG 99


>emb|CAN82245.1| hypothetical protein VITISV_018251 [Vitis vinifera]
          Length = 105

 Score =  147 bits (372), Expect = 2e-33
 Identities = 72/83 (86%), Positives = 77/83 (92%)
 Frame = -1

Query: 607 SVKIHNVDVTLKAEENKLTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWEL 428
           SVKIH+V+V  +  E KLTMKDLLSWVR NLIKERPEMFMKGD+VRPGVLVLVNDCDWEL
Sbjct: 23  SVKIHSVNVDPQVGEEKLTMKDLLSWVRANLIKERPEMFMKGDSVRPGVLVLVNDCDWEL 82

Query: 427 SGQLETTLEEKDVIVFISTLHGG 359
           SGQL+TTLEEKDVIVFISTLHGG
Sbjct: 83  SGQLDTTLEEKDVIVFISTLHGG 105


>ref|NP_001118872.1| ubiquitin-related modifier 1-2 [Arabidopsis thaliana]
           gi|238692413|sp|B3H7G2.1|URM12_ARATH RecName:
           Full=Ubiquitin-related modifier 1 homolog 2
           gi|332646635|gb|AEE80156.1| ubiquitin-related modifier
           1-2 [Arabidopsis thaliana]
          Length = 99

 Score =  147 bits (371), Expect = 2e-33
 Identities = 71/83 (85%), Positives = 77/83 (92%)
 Frame = -1

Query: 607 SVKIHNVDVTLKAEENKLTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWEL 428
           SVKIH V++ L  + + LTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWEL
Sbjct: 17  SVKIHKVNINLLNDSDILTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWEL 76

Query: 427 SGQLETTLEEKDVIVFISTLHGG 359
           SGQL+TTLE+KDVIVFISTLHGG
Sbjct: 77  SGQLDTTLEDKDVIVFISTLHGG 99


>ref|XP_002511777.1| Protein C9orf74, putative [Ricinus communis]
           gi|223548957|gb|EEF50446.1| Protein C9orf74, putative
           [Ricinus communis]
          Length = 99

 Score =  146 bits (369), Expect = 4e-33
 Identities = 70/83 (84%), Positives = 77/83 (92%)
 Frame = -1

Query: 607 SVKIHNVDVTLKAEENKLTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWEL 428
           SVKIHN++V  K   +KLTMKDLL+WVR NLIKERPEMFMKGD+VRPGVLVLVNDCDWEL
Sbjct: 17  SVKIHNINVDPKNGADKLTMKDLLAWVRNNLIKERPEMFMKGDSVRPGVLVLVNDCDWEL 76

Query: 427 SGQLETTLEEKDVIVFISTLHGG 359
           SGQL+TTLEEKDV+VFISTLHGG
Sbjct: 77  SGQLDTTLEEKDVVVFISTLHGG 99


>ref|XP_002878362.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297324200|gb|EFH54621.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 94

 Score =  146 bits (368), Expect = 5e-33
 Identities = 70/83 (84%), Positives = 76/83 (91%)
 Frame = -1

Query: 607 SVKIHNVDVTLKAEENKLTMKDLLSWVRTNLIKERPEMFMKGDTVRPGVLVLVNDCDWEL 428
           SVKIH V++    E + LTMKDLLSWVRTN+IKERPEMFMKGDTVRPGVLVLVNDCDWEL
Sbjct: 12  SVKIHKVNINFPNESDILTMKDLLSWVRTNVIKERPEMFMKGDTVRPGVLVLVNDCDWEL 71

Query: 427 SGQLETTLEEKDVIVFISTLHGG 359
           SGQL+TTLE+KDVIVFISTLHGG
Sbjct: 72  SGQLDTTLEDKDVIVFISTLHGG 94


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