BLASTX nr result

ID: Coptis24_contig00013414 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013414
         (1107 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|2...   398   e-108
ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|2...   394   e-107
ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|2235...   386   e-105
ref|XP_003554078.1| PREDICTED: metacaspase-9-like [Glycine max]       382   e-103
emb|CBI32852.3| unnamed protein product [Vitis vinifera]              382   e-103

>ref|XP_002322580.1| predicted protein [Populus trichocarpa] gi|222867210|gb|EEF04341.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  398 bits (1022), Expect = e-108
 Identities = 199/311 (63%), Positives = 237/311 (76%), Gaps = 6/311 (1%)
 Frame = -2

Query: 1076 MEMGKKRIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAPDSLVM 897
            MEMGKKR+A+LVGCNYPN+ NELHGCINDVL+M + L  RFGF+  ++++LTDAP S+V+
Sbjct: 1    MEMGKKRMAVLVGCNYPNTQNELHGCINDVLAMKEVLVKRFGFDASHVQLLTDAPGSVVL 60

Query: 896  PTGANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPSK---HGIWHDEAIVPCDMNLITDV 726
            PTGANI +AL  MIDQAE GDVL+FHYSGHGT +PS    H    DEAIVPCD NLITDV
Sbjct: 61   PTGANIKRALGHMIDQAEAGDVLFFHYSGHGTWIPSNKPGHAFRQDEAIVPCDFNLITDV 120

Query: 725  DFRRLVNRLPENSSFTIISDSCHSGGLIDKEKEQIGPXXXXXXXXXXXSC--PKTIPIDN 552
            DFR+LVNRLP+ +S TI+SDSCHSGGLIDKEKEQIGP               PK IP ++
Sbjct: 121  DFRQLVNRLPKGASLTILSDSCHSGGLIDKEKEQIGPNATITANNTAVHSHNPKAIPFES 180

Query: 551  ILDHLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSGCQSNE 372
            IL HLTSL+ I + D+G HL + FG++AS KY    ++  L   + PD GILLSGCQ+NE
Sbjct: 181  ILQHLTSLTNINTSDVGTHLLEFFGSDASLKYRLPPLEWDLFDSLKPDEGILLSGCQANE 240

Query: 371  TSADMNPTLEEGGKAYGAFSNAIQTILKEHGTSLSNRELVTKTRELLQAQGF-YQHPCLY 195
            TSADM+P  E GGKAYGAFSNA+Q +LK+H   LSN++LVT  RE+LQAQGF  QHPCLY
Sbjct: 241  TSADMSP-YEGGGKAYGAFSNAVQMVLKQHSGQLSNKQLVTMAREVLQAQGFEQQHPCLY 299

Query: 194  CSDDNADAPFL 162
            CSD NA A FL
Sbjct: 300  CSDQNAIATFL 310


>ref|XP_002307934.1| predicted protein [Populus trichocarpa] gi|222853910|gb|EEE91457.1|
            predicted protein [Populus trichocarpa]
          Length = 315

 Score =  394 bits (1011), Expect = e-107
 Identities = 197/311 (63%), Positives = 238/311 (76%), Gaps = 6/311 (1%)
 Frame = -2

Query: 1076 MEMGKKRIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAPDSLVM 897
            M+MG KR+A+LVGCNYPN+ NELHGCINDVL+M + L  RFGF+ +++++LTDAP S+V+
Sbjct: 1    MDMGNKRMAVLVGCNYPNTRNELHGCINDVLTMKEVLVKRFGFDLRSVQLLTDAPGSVVL 60

Query: 896  PTGANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPS---KHGIWHDEAIVPCDMNLITDV 726
            PTGANI KAL+ MIDQAE GDVL+FHYSGHGTR+PS    H   HDEAIVPCD NLITDV
Sbjct: 61   PTGANIKKALSHMIDQAEAGDVLFFHYSGHGTRIPSVKRGHPFRHDEAIVPCDFNLITDV 120

Query: 725  DFRRLVNRLPENSSFTIISDSCHSGGLIDKEKEQIGP--XXXXXXXXXXXSCPKTIPIDN 552
            DFR+LVNRLP+ +S T++SDSCHSGGLIDKEKEQIGP               PK IP ++
Sbjct: 121  DFRQLVNRLPKGASLTVLSDSCHSGGLIDKEKEQIGPKATITTNNAKVPSQSPKVIPFES 180

Query: 551  ILDHLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSGCQSNE 372
            IL HLTSL+ I + DIG HL + FG++AS K+    ++      I+PD GILLSGCQ+NE
Sbjct: 181  ILQHLTSLTNINTSDIGTHLLEFFGSDASLKFRLPPLERDQFESINPDEGILLSGCQANE 240

Query: 371  TSADMNPTLEEGGKAYGAFSNAIQTILKEHGTSLSNRELVTKTRELLQAQGF-YQHPCLY 195
            TSADM+P  E GGK+YGAFSNA+Q +LKEH   LSN++LV   RE+LQAQGF  QHPCLY
Sbjct: 241  TSADMSPN-EGGGKSYGAFSNAVQMVLKEHLGQLSNKQLVMMAREVLQAQGFEQQHPCLY 299

Query: 194  CSDDNADAPFL 162
            CSD NA   FL
Sbjct: 300  CSDQNAGTTFL 310


>ref|XP_002517452.1| caspase, putative [Ricinus communis] gi|223543463|gb|EEF44994.1|
            caspase, putative [Ricinus communis]
          Length = 325

 Score =  386 bits (991), Expect = e-105
 Identities = 199/316 (62%), Positives = 237/316 (75%), Gaps = 11/316 (3%)
 Frame = -2

Query: 1076 MEMGKKRIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAP---DS 906
            ME GKKR+A+LVGCNYPNS NELHGCINDV++M D L  RFGF+  +IE+LTDAP    S
Sbjct: 1    MEKGKKRMAVLVGCNYPNSRNELHGCINDVVTMRDVLVKRFGFDLSHIELLTDAPAPGSS 60

Query: 905  LVMPTGANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPSK---HGIWHDEAIVPCDMNLI 735
             +MPTGANI KAL++M+ +AE GDVL FHYSGHGT++PSK   H    DEAIVPCD NLI
Sbjct: 61   QIMPTGANIKKALDQMVGKAESGDVLLFHYSGHGTKIPSKRPGHPFRQDEAIVPCDFNLI 120

Query: 734  TDVDFRRLVNRLPENSSFTIISDSCHSGGLIDKEKEQIGPXXXXXXXXXXXSC----PKT 567
            TDVDFR+LVNRLP+ +SFTIISDSCHSGGLIDKEKEQIGP           S     PK 
Sbjct: 121  TDVDFRQLVNRLPKGTSFTIISDSCHSGGLIDKEKEQIGPNSTITANAENLSSHIHTPKH 180

Query: 566  IPIDNILDHLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSG 387
            IP ++IL H +SL+GI + DIG HL + FG +AS K+    ++  L   + PD GILLSG
Sbjct: 181  IPFNSILQHFSSLTGINTSDIGTHLLEYFGADASLKFRLQSLEQDLFESLKPDDGILLSG 240

Query: 386  CQSNETSADMNPTLEEGGKAYGAFSNAIQTILKEHGTSL-SNRELVTKTRELLQAQGFYQ 210
            CQ+NETSADMNP  E  G+AYGAFSNA+Q +LKE+   + SNRE+V   R++L+AQGF Q
Sbjct: 241  CQANETSADMNPGGEGRGQAYGAFSNAVQMVLKENPDQIFSNREVVMMARKVLEAQGFEQ 300

Query: 209  HPCLYCSDDNADAPFL 162
            HPCLYCSD NADA FL
Sbjct: 301  HPCLYCSDKNADAAFL 316


>ref|XP_003554078.1| PREDICTED: metacaspase-9-like [Glycine max]
          Length = 322

 Score =  382 bits (980), Expect = e-103
 Identities = 188/309 (60%), Positives = 233/309 (75%), Gaps = 7/309 (2%)
 Frame = -2

Query: 1061 KRIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAPDSL-VMPTGA 885
            KR+A+LVGCNYPN+ NELHGCINDVL+M DTL  RFGF+P NIE+LTDAP S   +PTGA
Sbjct: 10   KRVAVLVGCNYPNTSNELHGCINDVLAMKDTLEKRFGFDPSNIELLTDAPHSSNKLPTGA 69

Query: 884  NIMKALNRMIDQAEPGDVLYFHYSGHGTRLPSK---HGIWHDEAIVPCDMNLITDVDFRR 714
            NI +AL  M+D AE GDVLYFHYSGHGTR+PSK   H   H+EAIVPCD NLITD+D R+
Sbjct: 70   NIKEALANMVDGAEAGDVLYFHYSGHGTRIPSKKHGHPFRHEEAIVPCDFNLITDLDLRQ 129

Query: 713  LVNRLPENSSFTIISDSCHSGGLIDKEKEQIGPXXXXXXXXXXXSC---PKTIPIDNILD 543
            LVNR+P+ +S TI+SDSCHSGGLIDKEKEQIGP                PK IP ++I+ 
Sbjct: 130  LVNRVPKGASLTILSDSCHSGGLIDKEKEQIGPSSSTEKDSTSKPSCSTPKAIPFESIMQ 189

Query: 542  HLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSGCQSNETSA 363
             L+ L+ + + DIG HL ++FG+EAS ++      L L  P+ PD GILLSGCQ++ETSA
Sbjct: 190  QLSWLTKVNTTDIGTHLLELFGSEASLRFRIPAPDLDLLEPLRPDEGILLSGCQADETSA 249

Query: 362  DMNPTLEEGGKAYGAFSNAIQTILKEHGTSLSNRELVTKTRELLQAQGFYQHPCLYCSDD 183
            DMNP +  G KAYGAFSNA++ +L+E+   LSNR+LV + R+ L+ QGF QHPCLYCSD+
Sbjct: 250  DMNPNVACGQKAYGAFSNAVEMVLRENSPLLSNRDLVIRARKKLETQGFQQHPCLYCSDE 309

Query: 182  NADAPFLCK 156
            NA+A FLC+
Sbjct: 310  NANASFLCE 318


>emb|CBI32852.3| unnamed protein product [Vitis vinifera]
          Length = 326

 Score =  382 bits (980), Expect = e-103
 Identities = 194/317 (61%), Positives = 236/317 (74%), Gaps = 4/317 (1%)
 Frame = -2

Query: 1076 MEMGKKRIAILVGCNYPNSPNELHGCINDVLSMHDTLASRFGFEPKNIEVLTDAPDSLVM 897
            ME GKKR+A+LVGCNY N+ NELHGCINDVL+M +TL +RFGF+  ++E+LTD P SLVM
Sbjct: 1    MEEGKKRMAVLVGCNYHNTRNELHGCINDVLTMRETLVTRFGFQLSHVELLTDEPGSLVM 60

Query: 896  PTGANIMKALNRMIDQAEPGDVLYFHYSGHGTRLPS---KHGIWHDEAIVPCDMNLITDV 726
            PTGANI KAL+RM+DQAEPGDVL+FHYSGHGT++PS    H    DEAIVPCD NLITD+
Sbjct: 61   PTGANIKKALDRMVDQAEPGDVLFFHYSGHGTKIPSVKPHHPFSQDEAIVPCDFNLITDI 120

Query: 725  DFRRLVNRLPENSSFTIISDSCHSGGLIDKEKEQIGP-XXXXXXXXXXXSCPKTIPIDNI 549
            DFR+LV+R+P+ ++FTI+SDSCHSGGLIDKEKEQIGP              PK IP + I
Sbjct: 121  DFRQLVDRIPKGANFTILSDSCHSGGLIDKEKEQIGPSSVNFTSTTFPSQKPKMIPFEAI 180

Query: 548  LDHLTSLSGIQSPDIGAHLSQIFGNEASTKYLQNDVQLGLSGPIHPDSGILLSGCQSNET 369
              HL+SL+ I + DIG HL   FG +AS K+      L     +  D+GILLSGCQ+NET
Sbjct: 181  QQHLSSLTSINTSDIGTHLLVHFGGDASLKFRLPPTALDWFESLRSDAGILLSGCQANET 240

Query: 368  SADMNPTLEEGGKAYGAFSNAIQTILKEHGTSLSNRELVTKTRELLQAQGFYQHPCLYCS 189
            SADMNP +  G KAYGAFSNA+QT+ K+    LSN+E+V   R+ LQAQ F QHPCLYCS
Sbjct: 241  SADMNPMM-TGEKAYGAFSNAVQTVFKQQSGKLSNKEVVMLARKALQAQHFEQHPCLYCS 299

Query: 188  DDNADAPFLCKT*QGPS 138
            D+N DA FL +  +GPS
Sbjct: 300  DENVDATFLWQP-KGPS 315


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