BLASTX nr result
ID: Coptis24_contig00013402
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013402
(1686 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002266884.2| PREDICTED: translation initiation factor eIF... 706 0.0
emb|CBI21673.3| unnamed protein product [Vitis vinifera] 706 0.0
ref|XP_002313277.1| predicted protein [Populus trichocarpa] gi|2... 683 0.0
ref|XP_003531239.1| PREDICTED: translation initiation factor eIF... 663 0.0
ref|XP_002299963.1| predicted protein [Populus trichocarpa] gi|2... 659 0.0
>ref|XP_002266884.2| PREDICTED: translation initiation factor eIF-2B subunit gamma [Vitis
vinifera]
Length = 463
Score = 706 bits (1821), Expect = 0.0
Identities = 360/461 (78%), Positives = 388/461 (84%)
Frame = -1
Query: 1641 MDFQVVVLAGGTSKHLVPIVSKEVPNPLLPVANRPVLSYVLELLEASNLKDLIVVVEGQD 1462
MDFQVVVLAGGTSK LVP+VSKEVP LLPVANRPVLSYVLELLE SNLKDLIVVVEGQD
Sbjct: 3 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLELLEHSNLKDLIVVVEGQD 62
Query: 1461 AAAAVGGWISSAYVDRLHVEVAAVPEDVGTAGALRAIAHHLTADDILVVSGDLVCDVPPG 1282
AA VGGWIS AYVDRLHVEVAAVPEDVGTAGALRAIAHHLTA+DILVVSGDLVCDV PG
Sbjct: 63 AALRVGGWISGAYVDRLHVEVAAVPEDVGTAGALRAIAHHLTANDILVVSGDLVCDVSPG 122
Query: 1281 XXXXXXXXXXXXVTSLLCAAPXXXXXXXXXXXGKDKAKKPKRCNIIGLDPTRQFLLFVAT 1102
VT++LC+ P GKDK KKP CNIIGLDPT+QFLL++AT
Sbjct: 123 AVAAAHRRHGAAVTAMLCSVPVSGPLESGSSSGKDKTKKPGCCNIIGLDPTKQFLLYIAT 182
Query: 1101 GSEVEKDIRVQKSILRAFGQMEIRADLMDAHLYAFKRSVLQEVLDQKETFHSIKKDLLPY 922
G E+E+DIRVQKSILRA GQMEIRADLMDAHLYAFKR+VLQEVLDQK+ F S+++D+LPY
Sbjct: 183 GPEIERDIRVQKSILRAVGQMEIRADLMDAHLYAFKRAVLQEVLDQKDAFQSLQQDVLPY 242
Query: 921 LVRSQLRSEVSSNGAPQAEENWNEKVASQNNQSFFSQHLANATKPSFQEFYASGPNGSAP 742
LVRSQLRSE+S NGAP EEN ++KV NQ SQ LA + PSF E YA GPNGSAP
Sbjct: 243 LVRSQLRSELSLNGAPHTEENGHDKVVPGINQVMLSQLLAKTSTPSFHELYAMGPNGSAP 302
Query: 741 ASRTHKCCAYIAENSKYCARLNSLQAFSDINRDVIGEASHLSGYSFSVHNNIIHPSAELG 562
RTHKCC YIA KYCARLNS+QAFSDINRDVIGEASHLSGYSFS NNIIHPSAELG
Sbjct: 303 VRRTHKCCVYIASQDKYCARLNSIQAFSDINRDVIGEASHLSGYSFSAQNNIIHPSAELG 362
Query: 561 SKTTVGPQCMLGEGSQLGDKCSVKRSVIGRHCRIGSNVKIVNSVVMNHVTIGDGCSVQGS 382
SKTTVG CMLGEGSQLGDKCSVKRSVIGRHCRIGSNVK+VNSVVMNHVTI DGCS+QGS
Sbjct: 363 SKTTVGQNCMLGEGSQLGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTISDGCSIQGS 422
Query: 381 VICSNVQLQERVVLKDCLVGAAYVVTAGNEIKGESLARKEK 259
VICSN QLQERVVLKDC VGA +VVT+G+E KGE LA+KE+
Sbjct: 423 VICSNAQLQERVVLKDCQVGAGFVVTSGSEYKGEFLAKKER 463
>emb|CBI21673.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 706 bits (1821), Expect = 0.0
Identities = 360/461 (78%), Positives = 388/461 (84%)
Frame = -1
Query: 1641 MDFQVVVLAGGTSKHLVPIVSKEVPNPLLPVANRPVLSYVLELLEASNLKDLIVVVEGQD 1462
MDFQVVVLAGGTSK LVP+VSKEVP LLPVANRPVLSYVLELLE SNLKDLIVVVEGQD
Sbjct: 1 MDFQVVVLAGGTSKKLVPLVSKEVPKALLPVANRPVLSYVLELLEHSNLKDLIVVVEGQD 60
Query: 1461 AAAAVGGWISSAYVDRLHVEVAAVPEDVGTAGALRAIAHHLTADDILVVSGDLVCDVPPG 1282
AA VGGWIS AYVDRLHVEVAAVPEDVGTAGALRAIAHHLTA+DILVVSGDLVCDV PG
Sbjct: 61 AALRVGGWISGAYVDRLHVEVAAVPEDVGTAGALRAIAHHLTANDILVVSGDLVCDVSPG 120
Query: 1281 XXXXXXXXXXXXVTSLLCAAPXXXXXXXXXXXGKDKAKKPKRCNIIGLDPTRQFLLFVAT 1102
VT++LC+ P GKDK KKP CNIIGLDPT+QFLL++AT
Sbjct: 121 AVAAAHRRHGAAVTAMLCSVPVSGPLESGSSSGKDKTKKPGCCNIIGLDPTKQFLLYIAT 180
Query: 1101 GSEVEKDIRVQKSILRAFGQMEIRADLMDAHLYAFKRSVLQEVLDQKETFHSIKKDLLPY 922
G E+E+DIRVQKSILRA GQMEIRADLMDAHLYAFKR+VLQEVLDQK+ F S+++D+LPY
Sbjct: 181 GPEIERDIRVQKSILRAVGQMEIRADLMDAHLYAFKRAVLQEVLDQKDAFQSLQQDVLPY 240
Query: 921 LVRSQLRSEVSSNGAPQAEENWNEKVASQNNQSFFSQHLANATKPSFQEFYASGPNGSAP 742
LVRSQLRSE+S NGAP EEN ++KV NQ SQ LA + PSF E YA GPNGSAP
Sbjct: 241 LVRSQLRSELSLNGAPHTEENGHDKVVPGINQVMLSQLLAKTSTPSFHELYAMGPNGSAP 300
Query: 741 ASRTHKCCAYIAENSKYCARLNSLQAFSDINRDVIGEASHLSGYSFSVHNNIIHPSAELG 562
RTHKCC YIA KYCARLNS+QAFSDINRDVIGEASHLSGYSFS NNIIHPSAELG
Sbjct: 301 VRRTHKCCVYIASQDKYCARLNSIQAFSDINRDVIGEASHLSGYSFSAQNNIIHPSAELG 360
Query: 561 SKTTVGPQCMLGEGSQLGDKCSVKRSVIGRHCRIGSNVKIVNSVVMNHVTIGDGCSVQGS 382
SKTTVG CMLGEGSQLGDKCSVKRSVIGRHCRIGSNVK+VNSVVMNHVTI DGCS+QGS
Sbjct: 361 SKTTVGQNCMLGEGSQLGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTISDGCSIQGS 420
Query: 381 VICSNVQLQERVVLKDCLVGAAYVVTAGNEIKGESLARKEK 259
VICSN QLQERVVLKDC VGA +VVT+G+E KGE LA+KE+
Sbjct: 421 VICSNAQLQERVVLKDCQVGAGFVVTSGSEYKGEFLAKKER 461
>ref|XP_002313277.1| predicted protein [Populus trichocarpa] gi|222849685|gb|EEE87232.1|
predicted protein [Populus trichocarpa]
Length = 458
Score = 683 bits (1763), Expect = 0.0
Identities = 348/459 (75%), Positives = 391/459 (85%)
Frame = -1
Query: 1641 MDFQVVVLAGGTSKHLVPIVSKEVPNPLLPVANRPVLSYVLELLEASNLKDLIVVVEGQD 1462
MDFQVVVLAGGT K L+P+VSK+VP LLPVANRPVLSYVLE LE SNLKDLIVVVEG+D
Sbjct: 1 MDFQVVVLAGGTCKKLLPLVSKDVPKALLPVANRPVLSYVLEQLELSNLKDLIVVVEGED 60
Query: 1461 AAAAVGGWISSAYVDRLHVEVAAVPEDVGTAGALRAIAHHLTADDILVVSGDLVCDVPPG 1282
AA VGGWIS+AYVDRLHVEVAAVPEDVGTAGALRAIAHHLTA+DILVVSGDLV D+PPG
Sbjct: 61 AALHVGGWISNAYVDRLHVEVAAVPEDVGTAGALRAIAHHLTANDILVVSGDLVSDIPPG 120
Query: 1281 XXXXXXXXXXXXVTSLLCAAPXXXXXXXXXXXGKDKAKKPKRCNIIGLDPTRQFLLFVAT 1102
VT++LC+AP GKDK KKP+R NIIGLDP++QFLL +AT
Sbjct: 121 ALAAVHRQHDAVVTTMLCSAPVSGPTESGSSGGKDKIKKPRRHNIIGLDPSKQFLLHIAT 180
Query: 1101 GSEVEKDIRVQKSILRAFGQMEIRADLMDAHLYAFKRSVLQEVLDQKETFHSIKKDLLPY 922
G+EVEK+IR+QKSILRA QMEIRADLMDAH+YAFKRSVLQEVLD+K+ F S+K+D+LPY
Sbjct: 181 GAEVEKEIRIQKSILRAVDQMEIRADLMDAHMYAFKRSVLQEVLDEKDKFRSLKEDMLPY 240
Query: 921 LVRSQLRSEVSSNGAPQAEENWNEKVASQNNQSFFSQHLANATKPSFQEFYASGPNGSAP 742
LVRSQ++SEV NGAPQA +N NEKV+SQNNQ+ S+ L NA+ PSF + YAS N S+
Sbjct: 241 LVRSQMKSEVLLNGAPQA-KNGNEKVSSQNNQAVVSRILTNASTPSFHDLYASSNNDSSL 299
Query: 741 ASRTHKCCAYIAENSKYCARLNSLQAFSDINRDVIGEASHLSGYSFSVHNNIIHPSAELG 562
R HKCCAYIA S+YC RLNS+QAFSDINRDVIG+ASHLSGYSFS HNNIIHPSA+LG
Sbjct: 300 VRRIHKCCAYIASESRYCQRLNSIQAFSDINRDVIGDASHLSGYSFSSHNNIIHPSAQLG 359
Query: 561 SKTTVGPQCMLGEGSQLGDKCSVKRSVIGRHCRIGSNVKIVNSVVMNHVTIGDGCSVQGS 382
S+TTVGP CML EGSQ+GDKCSVKRSVIGRHCRIGSNVK+VNSV+MNHVTIGDGCS+QGS
Sbjct: 360 SRTTVGPHCMLWEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVIMNHVTIGDGCSIQGS 419
Query: 381 VICSNVQLQERVVLKDCLVGAAYVVTAGNEIKGESLARK 265
VICSN QLQER VLKDC VGA +VVTAG+E KGESLARK
Sbjct: 420 VICSNAQLQERAVLKDCQVGAGFVVTAGSEHKGESLARK 458
>ref|XP_003531239.1| PREDICTED: translation initiation factor eIF-2B subunit gamma-like
[Glycine max]
Length = 459
Score = 663 bits (1710), Expect = 0.0
Identities = 337/459 (73%), Positives = 379/459 (82%)
Frame = -1
Query: 1641 MDFQVVVLAGGTSKHLVPIVSKEVPNPLLPVANRPVLSYVLELLEASNLKDLIVVVEGQD 1462
MDFQVVVL GG SK L+P+VS+E+PN LLPVANRPVLSYVLE LE SNLKDLIVVVEG++
Sbjct: 1 MDFQVVVLGGGLSKKLLPLVSQELPNALLPVANRPVLSYVLEYLELSNLKDLIVVVEGEE 60
Query: 1461 AAAAVGGWISSAYVDRLHVEVAAVPEDVGTAGALRAIAHHLTADDILVVSGDLVCDVPPG 1282
A VG WIS AY DRLHVEVAAVPEDVGTAGA+RAI+HHLTA DILVVSGDLV DVP G
Sbjct: 61 AVLHVGAWISGAYADRLHVEVAAVPEDVGTAGAIRAISHHLTAKDILVVSGDLVTDVPLG 120
Query: 1281 XXXXXXXXXXXXVTSLLCAAPXXXXXXXXXXXGKDKAKKPKRCNIIGLDPTRQFLLFVAT 1102
VT++LC+AP GKDK KKP R ++IGLDPT+QFL+ +AT
Sbjct: 121 AVAATHRRHDAVVTAMLCSAPVSGPSESVSSGGKDKIKKPGRYDLIGLDPTKQFLVHIAT 180
Query: 1101 GSEVEKDIRVQKSILRAFGQMEIRADLMDAHLYAFKRSVLQEVLDQKETFHSIKKDLLPY 922
G+EVEKD+R+QKS+L A GQ+EIRADLMDAHLYAFKRSVLQEVLDQK FHS+K D+LPY
Sbjct: 181 GAEVEKDLRIQKSMLPAVGQIEIRADLMDAHLYAFKRSVLQEVLDQKSAFHSLKHDVLPY 240
Query: 921 LVRSQLRSEVSSNGAPQAEENWNEKVASQNNQSFFSQHLANATKPSFQEFYASGPNGSAP 742
LVRSQL+SEV NG PQAEEN EKV SQ+NQ SQ LANA++P F A GP+GS
Sbjct: 241 LVRSQLKSEVLLNGMPQAEENGTEKVISQSNQQMLSQILANASEPIFHLRNALGPHGSTS 300
Query: 741 ASRTHKCCAYIAENSKYCARLNSLQAFSDINRDVIGEASHLSGYSFSVHNNIIHPSAELG 562
RTHKCC YIA +SKYCARLNS+QA+SDINRDV GEASHLSGYSFS NNIIHPSAELG
Sbjct: 301 DRRTHKCCVYIAGSSKYCARLNSIQAYSDINRDVTGEASHLSGYSFSAQNNIIHPSAELG 360
Query: 561 SKTTVGPQCMLGEGSQLGDKCSVKRSVIGRHCRIGSNVKIVNSVVMNHVTIGDGCSVQGS 382
+KTTVGP C+LGEGSQ+GDKCSVKRSVIGRHCRIG NVK+VNSVVMNHVTIG+ CS+QGS
Sbjct: 361 AKTTVGPHCILGEGSQMGDKCSVKRSVIGRHCRIGPNVKVVNSVVMNHVTIGESCSIQGS 420
Query: 381 VICSNVQLQERVVLKDCLVGAAYVVTAGNEIKGESLARK 265
+ICSNVQLQER +LKDC VGA +VVTAG+E KGE LA+K
Sbjct: 421 IICSNVQLQERAILKDCQVGAGFVVTAGSECKGEVLAKK 459
>ref|XP_002299963.1| predicted protein [Populus trichocarpa] gi|222847221|gb|EEE84768.1|
predicted protein [Populus trichocarpa]
Length = 508
Score = 659 bits (1701), Expect = 0.0
Identities = 353/509 (69%), Positives = 391/509 (76%), Gaps = 50/509 (9%)
Frame = -1
Query: 1641 MDFQVVVLAGGTSKHLVPIVSKEVPNPLLPVANRPVLSYVLELLEASNLKDLIVVVEGQD 1462
MDFQVVVLAGGTSK L+P+VSKEVP LLPVANRPVLSYVLE LE SNLKDLIVVVEG+D
Sbjct: 1 MDFQVVVLAGGTSKKLLPLVSKEVPKALLPVANRPVLSYVLEQLELSNLKDLIVVVEGED 60
Query: 1461 AAAAVGGWISSAYVDRLHVE-------------------------------------VAA 1393
AA VGGWIS+AYVDRLHVE VAA
Sbjct: 61 AAIHVGGWISNAYVDRLHVEQQNGNKHRVHICSVKSCNLGFEKLMPCKIPKCYITLQVAA 120
Query: 1392 VPEDVGTAGALRAIAHHLTADDILVVSGDLVCDVPPGXXXXXXXXXXXXVTSLLCAAPXX 1213
V EDVGTAGALRAIAHHLTA+DILVVSGDLV DVPPG VT++LC AP
Sbjct: 121 VHEDVGTAGALRAIAHHLTANDILVVSGDLVFDVPPGALAAAHRKHNAVVTTMLCPAPVS 180
Query: 1212 XXXXXXXXXGKDKAKKPKRCNIIGLDPTRQFLLFVATGSEVEKDIRVQKSILRAFGQMEI 1033
GKDK KKP+R NIIGLDP++QFLL +ATG+EVEK+IR+QKSILRA GQMEI
Sbjct: 181 GPTESGSSGGKDKIKKPRRYNIIGLDPSKQFLLHIATGAEVEKEIRIQKSILRAVGQMEI 240
Query: 1032 RADLMDAHLYAFKR-------------SVLQEVLDQKETFHSIKKDLLPYLVRSQLRSEV 892
RADLMDAH+YAFKR SVLQEVLD+K+ F S+K+D+LPYLVRSQL+SE+
Sbjct: 241 RADLMDAHMYAFKRCSLSSPSLSISFRSVLQEVLDEKDEFQSLKEDVLPYLVRSQLKSEL 300
Query: 891 SSNGAPQAEENWNEKVASQNNQSFFSQHLANATKPSFQEFYASGPNGSAPASRTHKCCAY 712
NG PQAEE+ NEKV SQNNQ+ SQ +ANA+ PSF E +SG +GS R HKCCAY
Sbjct: 301 LFNGVPQAEESGNEKVGSQNNQAVVSQIMANASTPSFHEL-SSGNSGSTHVRRIHKCCAY 359
Query: 711 IAENSKYCARLNSLQAFSDINRDVIGEASHLSGYSFSVHNNIIHPSAELGSKTTVGPQCM 532
IA S+YC RLNS+QAFSDINRDVIG+ASHLSGYSFS HNNIIHPSA+LGS+TTVGP CM
Sbjct: 360 IASESRYCQRLNSIQAFSDINRDVIGDASHLSGYSFSSHNNIIHPSAQLGSRTTVGPHCM 419
Query: 531 LGEGSQLGDKCSVKRSVIGRHCRIGSNVKIVNSVVMNHVTIGDGCSVQGSVICSNVQLQE 352
L EGSQ+GDKCSVKRSVIGRHCRIGSNVK+VNSVVMNHVTIGDGCS+QGSVICSN QLQE
Sbjct: 420 LWEGSQMGDKCSVKRSVIGRHCRIGSNVKVVNSVVMNHVTIGDGCSIQGSVICSNAQLQE 479
Query: 351 RVVLKDCLVGAAYVVTAGNEIKGESLARK 265
R VLKDC VGA +VVTAG+E KGESLARK
Sbjct: 480 RAVLKDCQVGAGFVVTAGSEHKGESLARK 508