BLASTX nr result

ID: Coptis24_contig00013400 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013400
         (289 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793...   107   8e-22
ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806...   105   5e-21
ref|XP_003630153.1| Fasciclin-like arabinogalactan protein [Medi...   105   5e-21
ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medi...   104   7e-21
ref|XP_003588272.1| hypothetical protein MTR_1g005130 [Medicago ...   103   1e-20

>ref|XP_003532841.1| PREDICTED: uncharacterized protein LOC100793476 [Glycine max]
          Length = 440

 Score =  107 bits (268), Expect = 8e-22
 Identities = 55/96 (57%), Positives = 65/96 (67%)
 Frame = +1

Query: 1   VYIGGVEITHPDFFNNGLVVVHRLEGFISPLSPFSCNIERMNSLSFPPPXXXXXXXXXXX 180
           V++GGVEIT PD FNNG+VVVH L+GF+SPLSPFSC++ERMNSLSF  P           
Sbjct: 168 VFVGGVEITQPDLFNNGMVVVHGLQGFVSPLSPFSCDVERMNSLSF--PFHPDHPSGHAR 225

Query: 181 XXXXXXXXXXXXXPAIMRLMLKDAMLRLHNNGFSVL 288
                         A+MRLML+DAMLRL NNGFS+L
Sbjct: 226 HHLHHSNSPTAQPAAMMRLMLRDAMLRLRNNGFSIL 261


>ref|XP_003524275.1| PREDICTED: uncharacterized protein LOC100806312 [Glycine max]
          Length = 444

 Score =  105 bits (261), Expect = 5e-21
 Identities = 53/96 (55%), Positives = 64/96 (66%)
 Frame = +1

Query: 1   VYIGGVEITHPDFFNNGLVVVHRLEGFISPLSPFSCNIERMNSLSFPPPXXXXXXXXXXX 180
           V++GGVEIT PD FNNG+VVVH L+G++SPLSPFSC++ERMNSLSF  P           
Sbjct: 168 VFVGGVEITQPDLFNNGMVVVHGLQGYVSPLSPFSCDVERMNSLSF--PFHPDHRSGHAQ 225

Query: 181 XXXXXXXXXXXXXPAIMRLMLKDAMLRLHNNGFSVL 288
                         A+MRLML+DAMLRL NNGF +L
Sbjct: 226 HHLHHSNSATVQPAAMMRLMLRDAMLRLRNNGFGIL 261


>ref|XP_003630153.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|357519789|ref|XP_003630183.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
           gi|355524175|gb|AET04629.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
           gi|355524205|gb|AET04659.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 447

 Score =  105 bits (261), Expect = 5e-21
 Identities = 55/96 (57%), Positives = 63/96 (65%)
 Frame = +1

Query: 1   VYIGGVEITHPDFFNNGLVVVHRLEGFISPLSPFSCNIERMNSLSFPPPXXXXXXXXXXX 180
           V+IGGVEI  PD FNNG+VVVH L+GF+S LSPFSC++ERM SLSFP             
Sbjct: 166 VFIGGVEIAQPDLFNNGMVVVHGLQGFVSTLSPFSCDVERMTSLSFP-------FHPDHR 218

Query: 181 XXXXXXXXXXXXXPAIMRLMLKDAMLRLHNNGFSVL 288
                        PAIMRLML+DAMLRL NNGFS+L
Sbjct: 219 SSAHVHTHGVTVLPAIMRLMLRDAMLRLRNNGFSIL 254


>ref|XP_003630069.1| Fasciclin-like arabinogalactan protein [Medicago truncatula]
           gi|355524091|gb|AET04545.1| Fasciclin-like
           arabinogalactan protein [Medicago truncatula]
          Length = 448

 Score =  104 bits (260), Expect = 7e-21
 Identities = 55/96 (57%), Positives = 64/96 (66%)
 Frame = +1

Query: 1   VYIGGVEITHPDFFNNGLVVVHRLEGFISPLSPFSCNIERMNSLSFPPPXXXXXXXXXXX 180
           V+IGGVEIT PD FNNG+VVVH L+GF S LSPFSC++ERM+SLSFP             
Sbjct: 167 VFIGGVEITQPDLFNNGMVVVHGLQGFASKLSPFSCDVERMSSLSFP-------FHPDHR 219

Query: 181 XXXXXXXXXXXXXPAIMRLMLKDAMLRLHNNGFSVL 288
                        PAIMRLML+DAM+RL NNGFS+L
Sbjct: 220 SGAHVHTPGATVLPAIMRLMLRDAMVRLRNNGFSIL 255


>ref|XP_003588272.1| hypothetical protein MTR_1g005130 [Medicago truncatula]
           gi|355477320|gb|AES58523.1| hypothetical protein
           MTR_1g005130 [Medicago truncatula]
          Length = 240

 Score =  103 bits (257), Expect = 1e-20
 Identities = 54/93 (58%), Positives = 61/93 (65%)
 Frame = +1

Query: 10  GGVEITHPDFFNNGLVVVHRLEGFISPLSPFSCNIERMNSLSFPPPXXXXXXXXXXXXXX 189
           GGVEIT PD FNNG+VV+H L+GFISPLSPF C++ERM SLSFP                
Sbjct: 138 GGVEITQPDLFNNGMVVIHGLQGFISPLSPFYCDVERMTSLSFP--------FHPDHHSG 189

Query: 190 XXXXXXXXXXPAIMRLMLKDAMLRLHNNGFSVL 288
                     PAIMRLML+DAMLRL NNGFS+L
Sbjct: 190 QHIKTSGSVQPAIMRLMLRDAMLRLRNNGFSIL 222


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