BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013397
         (1015 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arab...    60   1e-06
gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]             59   2e-06
ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana] ...    59   2e-06
ref|NP_172347.2| F-box protein SKIP24 [Arabidopsis thaliana] gi|...    59   2e-06
ref|XP_002319735.1| f-box family protein [Populus trichocarpa] g...    57   5e-06

>ref|XP_002889710.1| hypothetical protein ARALYDRAFT_311923 [Arabidopsis lyrata subsp.
           lyrata] gi|297335552|gb|EFH65969.1| hypothetical protein
           ARALYDRAFT_311923 [Arabidopsis lyrata subsp. lyrata]
          Length = 294

 Score = 59.7 bits (143), Expect = 1e-06
 Identities = 26/60 (43%), Positives = 38/60 (63%)
 Frame = -3

Query: 785 MEAVELPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDH 606
           M A E+PD+IW KI+E+G+     ++ D+C  S+S +    LS  ++LWD LL L FP H
Sbjct: 1   MSANEIPDEIWRKIMEIGVKSSTFSYKDLCCISISSRRLCRLSCDDSLWDLLLFLDFPTH 60


>gb|AAF99761.1|AC003981_11 F22O13.19 [Arabidopsis thaliana]
          Length = 313

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 25/60 (41%), Positives = 38/60 (63%)
 Frame = -3

Query: 785 MEAVELPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDH 606
           M A E+PD++W KILE+G+     ++ D+C  S+S +    LS  ++LWD LL   FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60


>ref|NP_001077493.1| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|238055474|sp|Q9CAZ0.2|SKI24_ARATH RecName: Full=F-box
           protein SKIP24; AltName: Full=SKP1-interacting partner
           24 gi|332190217|gb|AEE28338.1| F-box protein SKIP24
           [Arabidopsis thaliana]
          Length = 295

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 25/60 (41%), Positives = 38/60 (63%)
 Frame = -3

Query: 785 MEAVELPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDH 606
           M A E+PD++W KILE+G+     ++ D+C  S+S +    LS  ++LWD LL   FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60


>ref|NP_172347.2| F-box protein SKIP24 [Arabidopsis thaliana]
           gi|17529082|gb|AAL38751.1| unknown protein [Arabidopsis
           thaliana] gi|22136746|gb|AAM91692.1| unknown protein
           [Arabidopsis thaliana] gi|332190216|gb|AEE28337.1| F-box
           protein SKIP24 [Arabidopsis thaliana]
          Length = 274

 Score = 58.5 bits (140), Expect = 2e-06
 Identities = 25/60 (41%), Positives = 38/60 (63%)
 Frame = -3

Query: 785 MEAVELPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFPDH 606
           M A E+PD++W KILE+G+     ++ D+C  S+S +    LS  ++LWD LL   FP+H
Sbjct: 1   MSANEIPDELWRKILEIGVKSSTFSYKDLCCISISSRRLFRLSCDDSLWDLLLVHDFPNH 60


>ref|XP_002319735.1| f-box family protein [Populus trichocarpa]
           gi|222858111|gb|EEE95658.1| f-box family protein
           [Populus trichocarpa]
          Length = 273

 Score = 57.4 bits (137), Expect = 5e-06
 Identities = 24/53 (45%), Positives = 37/53 (69%)
 Frame = -3

Query: 770 LPDQIWTKILELGINKWILNHPDICSFSMSCKHFNNLSNQNTLWDSLLTLVFP 612
           +PD++W +ILE+GI    LN+ D+C  S+SC+  + LS +N+LW  LL+  FP
Sbjct: 4   VPDELWRQILEMGIQNSKLNYKDLCCISISCRRLHRLSAENSLWLLLLSSDFP 56