BLASTX nr result

ID: Coptis24_contig00013390 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013390
         (1056 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324836.1| 2-oxoglutarate-dependent dioxygenase [Populu...   333   4e-89
ref|XP_002284931.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-...   330   4e-88
ref|XP_002309592.1| 2-oxoglutarate-dependent dioxygenase [Populu...   329   8e-88
ref|XP_002515597.1| Gibberellin 2-beta-dioxygenase, putative [Ri...   290   5e-76
ref|XP_003526431.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin ...   287   3e-75

>ref|XP_002324836.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222866270|gb|EEF03401.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 313

 Score =  333 bits (854), Expect = 4e-89
 Identities = 160/314 (50%), Positives = 221/314 (70%), Gaps = 3/314 (0%)
 Frame = +2

Query: 32  MKVEREIPFLDLTKDP-KDLEEGSDGWKCLSKKVREACEEYGCFQVKYNKLPTHLGEEMF 208
           M  + EIPFLD++++    +E  S+ WK L  +VREACE +G F + Y+K+PT L EEMF
Sbjct: 1   MAAKVEIPFLDISEEALAGIEVKSEKWKELCNQVREACETHGIFFLVYDKIPTSLREEMF 60

Query: 209 KASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPD 388
            A K LFDLP+E K K++N KPY  Y+G    +P +ES G++DA T+D ++ F   +WP+
Sbjct: 61  VALKALFDLPEETKNKHVNPKPYRSYLGNCPVIPFHESFGVDDAPTLDASQAFTNLMWPE 120

Query: 389 GNPVFCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPHS-N 565
           GNP FCET++ +S+K+ +L  LV+KM+ +SF  EK Y+S+VE   +I R+  YK P S  
Sbjct: 121 GNPSFCETIHGMSSKMQELNFLVMKMIYESFDIEKLYDSFVEETTSIFRIMKYKVPPSAT 180

Query: 566 DLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWSNAR 742
           D  + L  HTD +++T+LCQ E QGLE+ +K G W +V     AF   VG+ALKAWSN R
Sbjct: 181 DSSIGLVAHTDKNAITILCQNEVQGLEIQTKNGYWAQVMVPENAFTAVVGDALKAWSNGR 240

Query: 743 LHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNYYAS 922
           LH A+HRV+ +G++ RYS GLF  PKE AV+E+P+ELVDKEHPL YRPFNY DY++Y+ S
Sbjct: 241 LHAARHRVVISGEKDRYSCGLFSMPKEEAVVEVPDELVDKEHPLQYRPFNYSDYISYFVS 300

Query: 923 NLHMDNVLEVYAGV 964
            L  D+ LE+YAG+
Sbjct: 301 KL-SDDALEIYAGI 313


>ref|XP_002284931.1| PREDICTED: gibberellin 3-beta-dioxygenase 4-like [Vitis vinifera]
          Length = 316

 Score =  330 bits (846), Expect = 4e-88
 Identities = 156/308 (50%), Positives = 212/308 (68%), Gaps = 1/308 (0%)
 Frame = +2

Query: 44  REIPFLDLTKDPKDLEEGSDGWKCLSKKVREACEEYGCFQVKYNKLPTHLGEEMFKASKE 223
           +EIPFL+   D  DLE+ S+ WK L  KVREACE YGCF +  + +P  L +EMF   K 
Sbjct: 8   QEIPFLEFPGDDLDLEQESEEWKGLRSKVREACETYGCFGLVCDAIPAKLRQEMFMVMKT 67

Query: 224 LFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPDGNPVF 403
           LFDLP+E K K+ ++KPY+ Y GK   VPL ES GI+DA     A+ F   +WP+GNP F
Sbjct: 68  LFDLPEETKKKHSSTKPYHSYQGKCPIVPLLESFGIDDAPQPQAAQAFTNLLWPEGNPAF 127

Query: 404 CETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPHSNDLQMAL 583
           C  + S++ K+ +L  +VLK++++S G EKYYNS  E++ ++ R+  Y  P SND  + L
Sbjct: 128 CGALISMATKMLELNFIVLKLILESLGMEKYYNSQKENSASVFRLMKYTVPPSNDSAIGL 187

Query: 584 APHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWSNARLHTAKH 760
             HTD + LT+LCQ E QGLEVLSKEG W+R+     +F+V +G+ LKAW+N RLH  +H
Sbjct: 188 VTHTDKNILTILCQNEVQGLEVLSKEGNWIRLNFCKDSFIVIIGDLLKAWTNGRLHAVRH 247

Query: 761 RVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNYYASNLHMDN 940
           RV+ NGD+ RYS G+F+ P +   IE+PEELVD +HPL YRPF Y DY++++ SN+  D+
Sbjct: 248 RVVMNGDKDRYSCGMFVLPGDTVTIEVPEELVDNDHPLRYRPFTYSDYMSFFTSNI-CDD 306

Query: 941 VLEVYAGV 964
            LEVYAGV
Sbjct: 307 ALEVYAGV 314


>ref|XP_002309592.1| 2-oxoglutarate-dependent dioxygenase [Populus trichocarpa]
           gi|222855568|gb|EEE93115.1| 2-oxoglutarate-dependent
           dioxygenase [Populus trichocarpa]
          Length = 314

 Score =  329 bits (843), Expect = 8e-88
 Identities = 162/317 (51%), Positives = 223/317 (70%), Gaps = 3/317 (0%)
 Frame = +2

Query: 23  MDIMKVEREIPFLDLTKDP-KDLEEGSDGWKCLSKKVREACEEYGCFQVKYNKLPTHLGE 199
           M + KVE  IP LD +++    LE  S+ WK L  +VREACE +G F + Y+K+P  L E
Sbjct: 1   MAVAKVE--IPVLDFSEEALTGLEVKSEKWKELCNQVREACETHGVFFLVYDKIPGSLRE 58

Query: 200 EMFKASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQI 379
           EMF A K LFDLP+E K +++N KPY  Y+GK   +P +ES G++DA T+D ++ F   +
Sbjct: 59  EMFGAMKALFDLPEETKNRHVNPKPYRSYLGKCPVIPFHESFGVDDAPTLDASQAFTTLM 118

Query: 380 WPDGNPVFCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPH 559
           WP+GNP FCET++S+S+K+ +L  LV+KM+ +SFG EK Y+S++E   +I++V  YK P 
Sbjct: 119 WPEGNPSFCETIHSMSSKMQELNFLVMKMIYESFGIEKLYDSFLEETTSILKVMKYKVPP 178

Query: 560 SN-DLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWS 733
           S+ +  + L  HTD +++T+LCQ E QGLEV +K G+W +V     AF   VG+ +KAWS
Sbjct: 179 SDTESAIGLVAHTDKNAITILCQNEVQGLEVQTKNGDWAQVMVPENAFTAIVGDTVKAWS 238

Query: 734 NARLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNY 913
           N RLH A+HRV+ +GDR RYS GLF  PKE AVIE+P ELVDKEHPL YRPFN+ DYL+Y
Sbjct: 239 NGRLHAARHRVVISGDRDRYSCGLFSTPKEEAVIEVPNELVDKEHPLQYRPFNFSDYLSY 298

Query: 914 YASNLHMDNVLEVYAGV 964
           + S L  D+ LE+YA +
Sbjct: 299 FVSKL-SDDALEIYASI 314


>ref|XP_002515597.1| Gibberellin 2-beta-dioxygenase, putative [Ricinus communis]
           gi|223545541|gb|EEF47046.1| Gibberellin
           2-beta-dioxygenase, putative [Ricinus communis]
          Length = 316

 Score =  290 bits (741), Expect = 5e-76
 Identities = 147/315 (46%), Positives = 207/315 (65%), Gaps = 9/315 (2%)
 Frame = +2

Query: 47  EIPFLDLTKDPKDLEEGSDGWKCLSKKVREACEEYGCFQVKYN--KLPTHLGEEMFKASK 220
           EIP L  + +   L  GS+  + L  +VR+ACE +GCF + Y+   +P  L + +F + K
Sbjct: 5   EIPTLYFSGEA--LSSGSESRRELCNRVRKACESHGCFLLMYDHGNIPAKLRQNLFVSMK 62

Query: 221 ELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPDGNPV 400
            LFDLP++ K K +N KPY  Y G+   +P YES G++DA  +   + F   +WP GN  
Sbjct: 63  ALFDLPEDTKTKYVNPKPYRSYTGRSPVIPFYESFGLDDAHKLGQVQDFTNLMWPQGNTS 122

Query: 401 FCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVESNNTIVRVNGYKAPHSN----- 565
           FCE ++ +S+K+ ++ L+VLKM+ +SFG EK+Y+S+++ + ++ +V  Y AP SN     
Sbjct: 123 FCEILHVMSSKMLEMNLMVLKMIFESFGMEKHYDSHIQDSTSLFKVMKYIAPPSNGRGSG 182

Query: 566 -DLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKAWSNA 739
            D  +AL  H D +++T+LCQ E QGLEV SK+GEW RV     AFVV VGEALK WSN 
Sbjct: 183 EDSAIALRAHRDKNAITILCQNEVQGLEVESKDGEWARVMVPQDAFVVIVGEALKVWSNG 242

Query: 740 RLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVDKEHPLLYRPFNYMDYLNYYA 919
           RL  A+HRV+ NG   RYS  LF  PKE + IE+P ELVDK+HPLLYRPF + DY++Y+ 
Sbjct: 243 RLEAARHRVVINGKEDRYSCALFSMPKEESKIEVPCELVDKDHPLLYRPFIFSDYISYFV 302

Query: 920 SNLHMDNVLEVYAGV 964
           S L  D+ LE+YAG+
Sbjct: 303 SKL-SDDALEIYAGI 316


>ref|XP_003526431.1| PREDICTED: LOW QUALITY PROTEIN: gibberellin 20 oxidase 1-like
           [Glycine max]
          Length = 313

 Score =  287 bits (734), Expect = 3e-75
 Identities = 154/320 (48%), Positives = 210/320 (65%), Gaps = 9/320 (2%)
 Frame = +2

Query: 32  MKVEREIPFLDLTKDPKDLEEGSDGWKCLSKKVREACEEYGCFQVKYNKL-PTHLGEEMF 208
           M+ EREI  +      K LEEGS+ WK +SKKVREACE +GCF +  +++ P  + EE F
Sbjct: 1   MESEREIMMIPCFDFGKALEEGSEEWKEMSKKVREACESHGCFLLVCDEMIPKGVREEFF 60

Query: 209 KASKELFDLPDEIKVKNLNSKPYYGYIGKIDAVPLYESLGIEDATTVDGARTFAQQIWPD 388
              + LFDLP+E K+K+++ KPY  Y GK   +PL E+ GI+D      A  F   +WP 
Sbjct: 61  SNMEALFDLPEERKMKHISPKPYSSYSGKSPVIPLSETFGIDDVPLSASAEAFTNLMWPQ 120

Query: 389 GNPVFCETVNSISNKLYDLELLVLKMVMQSFGAEKYYNSYVE-----SNNTIVRVNGYKA 553
           GNP FCET+  +S+K+  L  L+LKM+++ +G +++Y S VE     SN+ +++   YK 
Sbjct: 121 GNPPFCETLKIMSSKMLKLSSLILKMIVEDYGIQQHYISDVEKMKSSSNSRLIK---YKI 177

Query: 554 P-HSNDLQMALAPHTDNSSLTVLCQ-ESQGLEVLSKEGEWLRVAPLPGAFVVFVGEALKA 727
           P ++ND    L  HTD ++LT++CQ E QGL+VLSK   W+    L   FVV VG+ LKA
Sbjct: 178 PENNNDSNTGLVSHTDKNALTIICQNEVQGLQVLSKTDNWIE---LXDGFVVIVGDILKA 234

Query: 728 WSNARLHTAKHRVMTNGDRQRYSFGLFLAPKEGAVIEIPEELVD-KEHPLLYRPFNYMDY 904
           WSN RLH A HRVM +GD++RYSFGLF  PKE   IE+P ELVD K HPL Y PF Y +Y
Sbjct: 235 WSNGRLHAATHRVMMSGDKERYSFGLFTMPKEEMDIEVPIELVDEKIHPLRYHPFKYGEY 294

Query: 905 LNYYASNLHMDNVLEVYAGV 964
           ++Y+ SNL  +N LEV+AG+
Sbjct: 295 ISYFVSNL-KENALEVFAGL 313


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