BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013376
         (1389 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]            314   3e-83
ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-l...   305   1e-80
gb|AFK43283.1| unknown [Lotus japonicus]                              303   7e-80
gb|ACM45083.1| shikimate kinase [Vitis vinifera]                      302   1e-79
ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [...   302   1e-79

>gb|ABA54868.1| putative shikimate kinase [Fagus sylvatica]
          Length = 302

 Score =  314 bits (805), Expect = 3e-83
 Identities = 161/235 (68%), Positives = 189/235 (80%)
 Frame = +3

Query: 414  KFVDFELSCSYKNTQAPAVESETNYTSVDEALILKKKSQDVAPYLSGCCIYLVGMMGSGK 593
            K    E+SCSYKN  A  +ES   +   D+ALILK KSQ++ PYLSG CIYLVGMMGSGK
Sbjct: 59   KTASLEVSCSYKNFPASVLESGGIHAPFDDALILKNKSQEIEPYLSGRCIYLVGMMGSGK 118

Query: 594  TTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLSLMRRL 773
            TTVGK+LS+VL Y+F DSD LVEQ V A SVA+IF  Y E FFR+ ET+VL  LSLM RL
Sbjct: 119  TTVGKVLSQVLSYAFFDSDTLVEQDVDANSVAEIFNLYGEGFFRDKETEVLRKLSLMHRL 178

Query: 774  VVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDAYTKAL 953
            VV+TGGGAV+RPINWKYM++GI+VWLDVPLEALARRIAAVGT SRPLLH++ GDAYTK  
Sbjct: 179  VVSTGGGAVVRPINWKYMQKGISVWLDVPLEALARRIAAVGTGSRPLLHHDSGDAYTKTF 238

Query: 954  VRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHI 1118
            +RL+ L EER E YANA+ARV LE V +K+G RDV++LTPTAIA+EAL QIE  +
Sbjct: 239  MRLTSLMEERSEAYANANARVSLEDVAAKLGHRDVSNLTPTAIAIEALEQIEGFL 293


>ref|XP_003531380.1| PREDICTED: shikimate kinase, chloroplastic-like [Glycine max]
          Length = 295

 Score =  305 bits (782), Expect = 1e-80
 Identities = 153/238 (64%), Positives = 189/238 (79%)
 Frame = +3

Query: 411  RKFVDFELSCSYKNTQAPAVESETNYTSVDEALILKKKSQDVAPYLSGCCIYLVGMMGSG 590
            R+    E+SCSY N  A  +ES +    +DE LILK +SQ++ PYL+G CIYLVGMMGSG
Sbjct: 50   RRTTALEVSCSYGNISASILESGSVRAPLDEELILKNRSQEIQPYLNGRCIYLVGMMGSG 109

Query: 591  KTTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLSLMRR 770
            KTTVGKI+S+VLGYSF DSD LVE+ VG  SVA IFK++ E FFR  ET+VL  LSLM +
Sbjct: 110  KTTVGKIMSQVLGYSFCDSDALVEEEVGGNSVADIFKQHGETFFRNKETEVLHKLSLMHQ 169

Query: 771  LVVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDAYTKA 950
            LV++TGGGAV RPINWKYM +G++VWLDVP+EALA+RIAAVGT SRPLLH E GD YT+A
Sbjct: 170  LVISTGGGAVTRPINWKYMHKGVSVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDPYTRA 229

Query: 951  LVRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHING 1124
             +RLS L EERGE YANA+ARV L+++  K+G RDV++L+PT IA+EAL QI+N + G
Sbjct: 230  FMRLSALFEERGEAYANANARVSLKNIAIKLGKRDVSELSPTDIAIEALEQIDNFLKG 287


>gb|AFK43283.1| unknown [Lotus japonicus]
          Length = 299

 Score =  303 bits (776), Expect = 7e-80
 Identities = 153/242 (63%), Positives = 186/242 (76%)
 Frame = +3

Query: 399  KTGERKFVDFELSCSYKNTQAPAVESETNYTSVDEALILKKKSQDVAPYLSGCCIYLVGM 578
            K   R+    E++CSY N  A  +ES +    +D+ LIL+ +SQ++ PYL+G CIYLVGM
Sbjct: 50   KIHRRRIASMEVACSYDNLPASTLESGSRRAPLDDELILENRSQEIQPYLNGRCIYLVGM 109

Query: 579  MGSGKTTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLS 758
            MGSGKTTVGKI+S+VLGY F DSD LVE+ VG  SVA IF  Y E FFR+ ET+ L  LS
Sbjct: 110  MGSGKTTVGKIMSKVLGYEFCDSDALVEEEVGGNSVADIFNLYGESFFRDKETEALHKLS 169

Query: 759  LMRRLVVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDA 938
            +M R +V+TGGGAV+RPINWKYM +GI+VWLDVP+EALA+RIAAVGT SRPLLH E GDA
Sbjct: 170  MMHRHIVSTGGGAVMRPINWKYMHKGISVWLDVPVEALAQRIAAVGTNSRPLLHYEAGDA 229

Query: 939  YTKALVRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHI 1118
            YT+AL+RLS L EERGE YANA ARV LE + +K G RDV DL+PTAIA+EAL QI+  +
Sbjct: 230  YTRALMRLSALFEERGEAYANASARVSLEKIATKRGQRDVLDLSPTAIAIEALEQIDAFL 289

Query: 1119 NG 1124
             G
Sbjct: 290  KG 291


>gb|ACM45083.1| shikimate kinase [Vitis vinifera]
          Length = 300

 Score =  302 bits (774), Expect = 1e-79
 Identities = 155/238 (65%), Positives = 186/238 (78%)
 Frame = +3

Query: 411  RKFVDFELSCSYKNTQAPAVESETNYTSVDEALILKKKSQDVAPYLSGCCIYLVGMMGSG 590
            +K V  E S SY+N  AP +ES +   S+DEALILK KSQ++ PY+ G C+YLVGMMGSG
Sbjct: 55   QKHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSG 114

Query: 591  KTTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLSLMRR 770
            KTT+GKILSEVLGYSF DSD LVE AV   SVA+IF  Y E FFR  E++ L  LSL   
Sbjct: 115  KTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHH 174

Query: 771  LVVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDAYTKA 950
            +VV+TGGGAVIRPINWKYM +GI+VWLDVPLEALARRI+AVGT SRPLLH++ GDAY + 
Sbjct: 175  MVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHDSGDAYNRT 234

Query: 951  LVRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHING 1124
            L RLS L +ERG+ YANA+ARV LE + +K+G RDV +LTPT IA+EAL+QIE  + G
Sbjct: 235  LTRLSNLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLKG 292


>ref|XP_002279932.1| PREDICTED: shikimate kinase, chloroplastic [Vitis vinifera]
            gi|147772563|emb|CAN67344.1| hypothetical protein
            VITISV_038221 [Vitis vinifera]
            gi|296082504|emb|CBI21509.3| unnamed protein product
            [Vitis vinifera]
          Length = 301

 Score =  302 bits (774), Expect = 1e-79
 Identities = 155/238 (65%), Positives = 186/238 (78%)
 Frame = +3

Query: 411  RKFVDFELSCSYKNTQAPAVESETNYTSVDEALILKKKSQDVAPYLSGCCIYLVGMMGSG 590
            +K V  E S SY+N  AP +ES +   S+DEALILK KSQ++ PY+ G C+YLVGMMGSG
Sbjct: 55   QKHVALEASGSYRNFPAPILESGSFPPSLDEALILKNKSQEILPYIDGRCVYLVGMMGSG 114

Query: 591  KTTVGKILSEVLGYSFLDSDKLVEQAVGAPSVAQIFKEYSEEFFRENETKVLGDLSLMRR 770
            KTT+GKILSEVLGYSF DSD LVE AV   SVA+IF  Y E FFR  E++ L  LSL   
Sbjct: 115  KTTIGKILSEVLGYSFCDSDTLVELAVKGTSVAEIFNLYGEGFFRNKESETLQKLSLTHH 174

Query: 771  LVVATGGGAVIRPINWKYMKQGITVWLDVPLEALARRIAAVGTASRPLLHNEPGDAYTKA 950
            +VV+TGGGAVIRPINWKYM +GI+VWLDVPLEALARRI+AVGT SRPLLH++ GDAY + 
Sbjct: 175  MVVSTGGGAVIRPINWKYMAKGISVWLDVPLEALARRISAVGTNSRPLLHHDSGDAYNRT 234

Query: 951  LVRLSVLSEERGEVYANADARVRLEHVVSKVGLRDVNDLTPTAIAVEALIQIENHING 1124
            L RLS L +ERG+ YANA+ARV LE + +K+G RDV +LTPT IA+EAL+QIE  + G
Sbjct: 235  LTRLSNLWKERGDAYANANARVSLEEIAAKLGHRDVTNLTPTVIAIEALLQIEAFLKG 292