BLASTX nr result

ID: Coptis24_contig00013372 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013372
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002321234.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_002527271.1| conserved hypothetical protein [Ricinus comm...    73   2e-11
ref|XP_002270450.2| PREDICTED: protein FAR1-RELATED SEQUENCE 3-l...    73   3e-11
ref|XP_003634984.1| PREDICTED: uncharacterized protein LOC100852...    73   3e-11
emb|CBI35674.3| unnamed protein product [Vitis vinifera]               72   5e-11

>ref|XP_002321234.1| predicted protein [Populus trichocarpa] gi|222862007|gb|EEE99549.1|
           predicted protein [Populus trichocarpa]
          Length = 171

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 34/60 (56%), Positives = 52/60 (86%)
 Frame = +3

Query: 201 KKAQEDKKKIRELSAELQREKRQSATYREQLNMVLKEMEDHTNHLSKQVENIVYNVKELE 380
           ++  E   KIREL+AELQRE+++SA Y+EQL+MVL++ME+H+NHLS+ +++IV +VKE+E
Sbjct: 112 RRTDEKDVKIRELTAELQRERKRSAAYQEQLDMVLRDMEEHSNHLSRNIDDIVQSVKEIE 171


>ref|XP_002527271.1| conserved hypothetical protein [Ricinus communis]
           gi|223533364|gb|EEF35115.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 209

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 33/65 (50%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = +3

Query: 195 ILKKAQEDKK-KIRELSAELQREKRQSATYREQLNMVLKEMEDHTNHLSKQVENIVYNVK 371
           +L +  ++K  KIREL+AELQRE+++SA Y+EQL  VL++ME+H+NHLS+ +E++V +V+
Sbjct: 144 LLSQTPDEKDVKIRELTAELQRERKRSAAYQEQLYTVLRDMEEHSNHLSRNIEDVVQSVR 203

Query: 372 ELEPR 386
           E+E +
Sbjct: 204 EIESK 208


>ref|XP_002270450.2| PREDICTED: protein FAR1-RELATED SEQUENCE 3-like [Vitis vinifera]
          Length = 245

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 48/67 (71%)
 Frame = +3

Query: 180 RWCYEILKKAQEDKKKIRELSAELQREKRQSATYREQLNMVLKEMEDHTNHLSKQVENIV 359
           R   ++ K   E  KKIRELS+EL R  +Q A  REQL MVLK++E HTNHL+K V++IV
Sbjct: 164 RGSVQLPKLMDEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIV 223

Query: 360 YNVKELE 380
            NVKE+E
Sbjct: 224 ENVKEVE 230


>ref|XP_003634984.1| PREDICTED: uncharacterized protein LOC100852466 [Vitis vinifera]
          Length = 664

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 38/67 (56%), Positives = 48/67 (71%)
 Frame = +3

Query: 180 RWCYEILKKAQEDKKKIRELSAELQREKRQSATYREQLNMVLKEMEDHTNHLSKQVENIV 359
           R   ++ K   E  KKIRELS+EL R  +Q A  REQL MVLK++E HTNHL+K V++IV
Sbjct: 588 RGSVQLPKLMDEKDKKIRELSSELHRANQQLAECREQLEMVLKDIERHTNHLTKSVQDIV 647

Query: 360 YNVKELE 380
            NVKE+E
Sbjct: 648 ENVKEVE 654


>emb|CBI35674.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/65 (49%), Positives = 54/65 (83%), Gaps = 1/65 (1%)
 Frame = +3

Query: 195 ILKKAQEDKK-KIRELSAELQREKRQSATYREQLNMVLKEMEDHTNHLSKQVENIVYNVK 371
           +L +  ++K  KIREL+AELQRE+++ A ++EQL+MVL++ME+H+NHLS+ ++ IV +V+
Sbjct: 549 LLSQTPDEKDIKIRELTAELQRERKRCAAFQEQLDMVLRDMEEHSNHLSRNIDGIVQSVR 608

Query: 372 ELEPR 386
           E+E +
Sbjct: 609 EIESK 613


Top