BLASTX nr result

ID: Coptis24_contig00013369 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013369
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002518816.1| gibberellin 20-oxidase, putative [Ricinus co...   189   2e-46
emb|CAN72288.1| hypothetical protein VITISV_025459 [Vitis vinifera]   186   2e-45
emb|CBI27476.3| unnamed protein product [Vitis vinifera]              185   4e-45
ref|XP_003631313.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-...   185   4e-45
dbj|BAJ92832.1| predicted protein [Hordeum vulgare subsp. vulgar...   153   2e-35

>ref|XP_002518816.1| gibberellin 20-oxidase, putative [Ricinus communis]
           gi|223542197|gb|EEF43741.1| gibberellin 20-oxidase,
           putative [Ricinus communis]
          Length = 332

 Score =  189 bits (480), Expect = 2e-46
 Identities = 89/113 (78%), Positives = 97/113 (85%)
 Frame = -1

Query: 340 PRATSAKQFSWSEAFHIPLTMISEEACYGELSSLREVMEKFATAMSKLARTLAGVLAENL 161
           P AT   QFSWSEAFHIPLT ISE+ACYGE +SLREVM +FA AMSKLA+ LAG+LAENL
Sbjct: 115 PTATCPNQFSWSEAFHIPLTKISEQACYGEFTSLREVMMEFAAAMSKLAKLLAGILAENL 174

Query: 160 GHPDGVFGEVCNESTCFLRLNRYPQCSIQPEMFGLVPHTDSDFLTILYQDQVG 2
           GHP  VF E+C+ES CFLRLNRYP C I PEMFGLVPHTDSDFLTILYQD+VG
Sbjct: 175 GHPRAVFEEICHESNCFLRLNRYPSCPISPEMFGLVPHTDSDFLTILYQDEVG 227


>emb|CAN72288.1| hypothetical protein VITISV_025459 [Vitis vinifera]
          Length = 340

 Score =  186 bits (472), Expect = 2e-45
 Identities = 87/113 (76%), Positives = 97/113 (85%)
 Frame = -1

Query: 340 PRATSAKQFSWSEAFHIPLTMISEEACYGELSSLREVMEKFATAMSKLARTLAGVLAENL 161
           P AT  K+ SWSEAFHIPLT +SEEACYGE  SLREVM++FA AMS LAR LAGVLAE+L
Sbjct: 119 PTATRLKELSWSEAFHIPLTKVSEEACYGEFCSLREVMQEFAKAMSNLARLLAGVLAESL 178

Query: 160 GHPDGVFGEVCNESTCFLRLNRYPQCSIQPEMFGLVPHTDSDFLTILYQDQVG 2
           GH  GVF E+C+ESTCFLRLNRYP C + PE+FGLVPHTDSDFLTILYQD+VG
Sbjct: 179 GHQKGVFDEICDESTCFLRLNRYPPCPVSPEVFGLVPHTDSDFLTILYQDEVG 231


>emb|CBI27476.3| unnamed protein product [Vitis vinifera]
          Length = 390

 Score =  185 bits (469), Expect = 4e-45
 Identities = 86/113 (76%), Positives = 97/113 (85%)
 Frame = -1

Query: 340 PRATSAKQFSWSEAFHIPLTMISEEACYGELSSLREVMEKFATAMSKLARTLAGVLAENL 161
           P AT  K+ SWSEAFHIPLT +SEEACYGE  SLREVM++FA AMS LAR LAGVLAE+L
Sbjct: 169 PTATCPKELSWSEAFHIPLTKVSEEACYGEFCSLREVMQEFAKAMSNLARLLAGVLAESL 228

Query: 160 GHPDGVFGEVCNESTCFLRLNRYPQCSIQPEMFGLVPHTDSDFLTILYQDQVG 2
           GH  GVF E+C+E+TCFLRLNRYP C + PE+FGLVPHTDSDFLTILYQD+VG
Sbjct: 229 GHQKGVFDEICDENTCFLRLNRYPPCPVSPEVFGLVPHTDSDFLTILYQDEVG 281


>ref|XP_003631313.1| PREDICTED: gibberellin 2-beta-dioxygenase 8-like [Vitis vinifera]
          Length = 340

 Score =  185 bits (469), Expect = 4e-45
 Identities = 86/113 (76%), Positives = 97/113 (85%)
 Frame = -1

Query: 340 PRATSAKQFSWSEAFHIPLTMISEEACYGELSSLREVMEKFATAMSKLARTLAGVLAENL 161
           P AT  K+ SWSEAFHIPLT +SEEACYGE  SLREVM++FA AMS LAR LAGVLAE+L
Sbjct: 119 PTATCPKELSWSEAFHIPLTKVSEEACYGEFCSLREVMQEFAKAMSNLARLLAGVLAESL 178

Query: 160 GHPDGVFGEVCNESTCFLRLNRYPQCSIQPEMFGLVPHTDSDFLTILYQDQVG 2
           GH  GVF E+C+E+TCFLRLNRYP C + PE+FGLVPHTDSDFLTILYQD+VG
Sbjct: 179 GHQKGVFDEICDENTCFLRLNRYPPCPVSPEVFGLVPHTDSDFLTILYQDEVG 231


>dbj|BAJ92832.1| predicted protein [Hordeum vulgare subsp. vulgare]
           gi|326522801|dbj|BAJ88446.1| predicted protein [Hordeum
           vulgare subsp. vulgare]
          Length = 347

 Score =  153 bits (386), Expect = 2e-35
 Identities = 78/115 (67%), Positives = 89/115 (77%), Gaps = 2/115 (1%)
 Frame = -1

Query: 340 PRATSAKQFSWSEAFHIPLTMISEEAC-YGELSSLREVMEKFATAMSKLARTLAGVLAEN 164
           P ATS +Q SWSEAFH+PL  IS   C YGEL+S+R+V ++ A AMSKLA TLA VLAE+
Sbjct: 128 PTATSPRQLSWSEAFHVPLAGISGSPCSYGELTSIRDVTQEVAKAMSKLANTLARVLAES 187

Query: 163 LGHPDGV-FGEVCNESTCFLRLNRYPQCSIQPEMFGLVPHTDSDFLTILYQDQVG 2
           LGH  G  F E C+ESTCFLRLNRYP C   P+ FGLVPHTDSDFLT+L QDQVG
Sbjct: 188 LGHTAGQGFPEGCDESTCFLRLNRYPACPFSPDAFGLVPHTDSDFLTVLCQDQVG 242


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