BLASTX nr result

ID: Coptis24_contig00013368 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013368
         (748 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|2...   138   1e-30
ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|2...   137   2e-30
gb|ABK96444.1| unknown [Populus trichocarpa x Populus deltoides]      136   4e-30
ref|XP_002269716.1| PREDICTED: uncharacterized protein LOC100255...   129   5e-28
ref|XP_003543715.1| PREDICTED: uncharacterized protein LOC100804...   121   2e-25

>ref|XP_002299164.1| predicted protein [Populus trichocarpa] gi|222846422|gb|EEE83969.1|
           predicted protein [Populus trichocarpa]
          Length = 92

 Score =  138 bits (347), Expect = 1e-30
 Identities = 64/90 (71%), Positives = 78/90 (86%)
 Frame = +1

Query: 259 MEVLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWEMLRRTESEM 438
           M++  KM+FP+RRVW +VSARVKARKNG  LLKLH+DVQTC Y+DVQVMWE+LRR+ESE+
Sbjct: 1   MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 439 MAQTPTKRKQKPFWRVFVWSHNRTSSSFGA 528
           MA  P KRKQ+PFWRVFVWS++  +SSF A
Sbjct: 61  MASHP-KRKQRPFWRVFVWSNHSAASSFSA 89


>ref|XP_002303969.1| predicted protein [Populus trichocarpa] gi|222841401|gb|EEE78948.1|
           predicted protein [Populus trichocarpa]
          Length = 90

 Score =  137 bits (346), Expect = 2e-30
 Identities = 63/88 (71%), Positives = 78/88 (88%)
 Frame = +1

Query: 265 VLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWEMLRRTESEMMA 444
           +L KM+FP+RRVW AVSAR++ARKNG GLL+LH+DVQTC Y+DVQVMWE+LRR+ESE+MA
Sbjct: 1   MLHKMIFPVRRVWLAVSARLRARKNGAGLLELHNDVQTCGYEDVQVMWEILRRSESELMA 60

Query: 445 QTPTKRKQKPFWRVFVWSHNRTSSSFGA 528
             P KRKQ+PFWRVFVWS++  +SSF A
Sbjct: 61  SLP-KRKQRPFWRVFVWSNHSAASSFSA 87


>gb|ABK96444.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 92

 Score =  136 bits (343), Expect = 4e-30
 Identities = 63/88 (71%), Positives = 77/88 (87%)
 Frame = +1

Query: 259 MEVLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWEMLRRTESEM 438
           M++  KM+FP+RRVW +VSARVKARKNG  LLKLH+DVQTC Y+DVQVMWE+LRR+ESE+
Sbjct: 1   MDLWHKMIFPVRRVWLSVSARVKARKNGANLLKLHNDVQTCGYEDVQVMWEILRRSESEL 60

Query: 439 MAQTPTKRKQKPFWRVFVWSHNRTSSSF 522
           MA  P KRKQ+PFWRVFVWS++  +SSF
Sbjct: 61  MASHP-KRKQRPFWRVFVWSNHSAASSF 87


>ref|XP_002269716.1| PREDICTED: uncharacterized protein LOC100255236 [Vitis vinifera]
           gi|298204741|emb|CBI25239.3| unnamed protein product
           [Vitis vinifera]
          Length = 93

 Score =  129 bits (325), Expect = 5e-28
 Identities = 64/91 (70%), Positives = 74/91 (81%), Gaps = 1/91 (1%)
 Frame = +1

Query: 259 MEVLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWE-MLRRTESE 435
           ME+  KM+FP+RR W AVS+RVKARKNGGGLLKLHDDVQTCEY DV  MW  ML R+ESE
Sbjct: 1   MELWHKMIFPVRRAWLAVSSRVKARKNGGGLLKLHDDVQTCEYDDVHRMWNMMLSRSESE 60

Query: 436 MMAQTPTKRKQKPFWRVFVWSHNRTSSSFGA 528
             +Q  TKRK +PFWRVFVWS++ +SSSF A
Sbjct: 61  HGSQ-HTKRKHRPFWRVFVWSNHNSSSSFSA 90


>ref|XP_003543715.1| PREDICTED: uncharacterized protein LOC100804925 [Glycine max]
          Length = 90

 Score =  121 bits (303), Expect = 2e-25
 Identities = 56/91 (61%), Positives = 72/91 (79%)
 Frame = +1

Query: 259 MEVLQKMVFPMRRVWFAVSARVKARKNGGGLLKLHDDVQTCEYQDVQVMWEMLRRTESEM 438
           ME+   M FP+RRVW ++SAR+K RKNG GLLKL DDVQTC YQDVQVMWEML+RTE E+
Sbjct: 1   MEIWANMFFPLRRVWLSLSARLKPRKNGAGLLKLQDDVQTCGYQDVQVMWEMLQRTEGEV 60

Query: 439 MAQTPTKRKQKPFWRVFVWSHNRTSSSFGAA 531
           + +   KRKQ PFWR+FVWS++  S++  ++
Sbjct: 61  I-ENHHKRKQFPFWRIFVWSNHTQSANHASS 90


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