BLASTX nr result

ID: Coptis24_contig00013357 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013357
         (1050 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37208.3| unnamed protein product [Vitis vinifera]              166   7e-39
ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258...   166   7e-39
ref|NP_194598.1| uncharacterized protein [Arabidopsis thaliana] ...   159   1e-36
emb|CAA22983.1| hypothetical protein [Arabidopsis thaliana] gi|7...   159   1e-36
dbj|BAJ95990.1| predicted protein [Hordeum vulgare subsp. vulgare]    159   1e-36

>emb|CBI37208.3| unnamed protein product [Vitis vinifera]
          Length = 512

 Score =  166 bits (421), Expect = 7e-39
 Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 20/193 (10%)
 Frame = +1

Query: 361 DKGVENEDDCVIL------------------DDDECVILDGDPYKEIKVLNVGIGNXXXX 486
           DK  ++ DD V++                  DDD+CV+LDGDP   +  ++         
Sbjct: 37  DKPTDDSDDVVVVREVNPKQKSKSSKSTAKDDDDDCVVLDGDPDNPVPTVD-----DSEN 91

Query: 487 XXXELVIVAEKGQVACRDYPHPRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTG 666
              +L++V EKGQ+ACRDYPH R  CA+FPFN+  H++HCD CHCYVCD+ APC +WGTG
Sbjct: 92  GSDDLLVVGEKGQIACRDYPHSRDQCAKFPFNSTTHDRHCDQCHCYVCDSLAPCGHWGTG 151

Query: 667 GSGGDHCHSTDKEKTWREQRECFKQGKMAQIPASKHHETTPSVAPTTHPTLTHSEPLNSG 846
            +  DHCH+T+K++ W +QR+ F+ GK  Q+P  KH    P V+  +   L    P+   
Sbjct: 152 MNIVDHCHATNKDEFWVDQRKSFRLGKSQQVPIQKHATALPQVSQNSSFPLLQPNPIWQN 211

Query: 847 NVS--THTNSCSN 879
            VS  T  ++CS+
Sbjct: 212 QVSRPTSIHACSS 224


>ref|XP_002268946.1| PREDICTED: uncharacterized protein LOC100258397 [Vitis vinifera]
          Length = 511

 Score =  166 bits (421), Expect = 7e-39
 Identities = 78/193 (40%), Positives = 112/193 (58%), Gaps = 20/193 (10%)
 Frame = +1

Query: 361 DKGVENEDDCVIL------------------DDDECVILDGDPYKEIKVLNVGIGNXXXX 486
           DK  ++ DD V++                  DDD+CV+LDGDP   +  ++         
Sbjct: 37  DKPTDDSDDVVVVREVNPKQKSKSSKSTAKDDDDDCVVLDGDPDNPVPTVD-----DSEN 91

Query: 487 XXXELVIVAEKGQVACRDYPHPRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTG 666
              +L++V EKGQ+ACRDYPH R  CA+FPFN+  H++HCD CHCYVCD+ APC +WGTG
Sbjct: 92  GSDDLLVVGEKGQIACRDYPHSRDQCAKFPFNSTTHDRHCDQCHCYVCDSLAPCGHWGTG 151

Query: 667 GSGGDHCHSTDKEKTWREQRECFKQGKMAQIPASKHHETTPSVAPTTHPTLTHSEPLNSG 846
            +  DHCH+T+K++ W +QR+ F+ GK  Q+P  KH    P V+  +   L    P+   
Sbjct: 152 MNIVDHCHATNKDEFWVDQRKSFRLGKSQQVPIQKHATALPQVSQNSSFPLLQPNPIWQN 211

Query: 847 NVS--THTNSCSN 879
            VS  T  ++CS+
Sbjct: 212 QVSRPTSIHACSS 224


>ref|NP_194598.1| uncharacterized protein [Arabidopsis thaliana]
           gi|115311409|gb|ABI93885.1| At4g28690 [Arabidopsis
           thaliana] gi|332660126|gb|AEE85526.1| uncharacterized
           protein [Arabidopsis thaliana]
          Length = 448

 Score =  159 bits (402), Expect = 1e-36
 Identities = 71/135 (52%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
 Frame = +1

Query: 370 VENEDDCVILDDDECVILDGDPYKEIKVLNVGIGNXXXXXXXELVIVAEKGQVACRDYPH 549
           VENEDD     DD+CVILD DP  +  V+              +++V +KG+VACRD+PH
Sbjct: 50  VENEDD-----DDDCVILDFDPTAKETVIET-------CETDGVLVVGQKGEVACRDFPH 97

Query: 550 PRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGG-SGGDHCHSTDKEKTWREQR 726
           PRH CA++PF +  H+  C++CHCYVCDTRAPC YW +GG S  DHCH+ DKEKTW +QR
Sbjct: 98  PRHACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGISNTDHCHANDKEKTWNDQR 157

Query: 727 ECFKQGKMAQIPASK 771
           EC + G M   P SK
Sbjct: 158 ECIRTGNMLPRPVSK 172


>emb|CAA22983.1| hypothetical protein [Arabidopsis thaliana]
           gi|7269724|emb|CAB81457.1| hypothetical protein
           [Arabidopsis thaliana]
          Length = 419

 Score =  159 bits (402), Expect = 1e-36
 Identities = 71/135 (52%), Positives = 90/135 (66%), Gaps = 1/135 (0%)
 Frame = +1

Query: 370 VENEDDCVILDDDECVILDGDPYKEIKVLNVGIGNXXXXXXXELVIVAEKGQVACRDYPH 549
           VENEDD     DD+CVILD DP  +  V+              +++V +KG+VACRD+PH
Sbjct: 21  VENEDD-----DDDCVILDFDPTAKETVIET-------CETDGVLVVGQKGEVACRDFPH 68

Query: 550 PRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGG-SGGDHCHSTDKEKTWREQR 726
           PRH CA++PF +  H+  C++CHCYVCDTRAPC YW +GG S  DHCH+ DKEKTW +QR
Sbjct: 69  PRHACAKYPFKSTLHQTFCEMCHCYVCDTRAPCTYWFSGGISNTDHCHANDKEKTWNDQR 128

Query: 727 ECFKQGKMAQIPASK 771
           EC + G M   P SK
Sbjct: 129 ECIRTGNMLPRPVSK 143


>dbj|BAJ95990.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 830

 Score =  159 bits (401), Expect = 1e-36
 Identities = 90/203 (44%), Positives = 116/203 (57%), Gaps = 9/203 (4%)
 Frame = +1

Query: 367 GVENEDDCVILDDDECVILDGDPYKEIKVLNVGIGNXXXXXXXELVIVAEKGQVACRDYP 546
           GVE+EDD    DDD+CVILD DP+  + V +   G        EL IVAEKG+VACRD+P
Sbjct: 211 GVEDEDD----DDDDCVILDSDPFSAVAVNDEKDGGSDE----ELQIVAEKGKVACRDFP 262

Query: 547 HPRHLCARFPFNTNAHEKHCDLCHCYVCDTRAPCVYWGTGGSGGDHCHSTDKEKTWREQR 726
           H RHLC+  PF T +HEKHC +C+C+VCD  APC YWG G   GDHCH+TDKE  W   R
Sbjct: 263 HSRHLCSNMPFGTTSHEKHCAMCYCFVCDVPAPCGYWGNGLLVGDHCHATDKETKWNILR 322

Query: 727 ECFKQGKMAQIPASKHHETTPSVAPTTHPT------LTHSEPLN---SGNVSTHTNSCSN 879
           + F   +   +PA  H E   +V PT  P       L +  PL    + N  TH +  ++
Sbjct: 323 QEF---RCKDLPA-PHREAETAVHPTMTPLDRLCLFLGNQIPLQNVVTQNQHTHASVRAS 378

Query: 880 TPHAFSNEGRDVLSLRSMVLDRP 948
           T +  S EG    S+ +  + RP
Sbjct: 379 T-NVESREGSGTSSVHTAQVARP 400


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