BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013353
         (841 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communi...    85   2e-15
ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [...    80   3e-15
ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-l...    82   1e-14
ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-l...    80   2e-14
ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|2...    78   5e-14

>ref|XP_002510201.1| WD-repeat protein, putative [Ricinus communis]
           gi|223550902|gb|EEF52388.1| WD-repeat protein, putative
           [Ricinus communis]
          Length = 452

 Score = 84.7 bits (208), Expect(2) = 2e-15
 Identities = 44/105 (41%), Positives = 67/105 (63%), Gaps = 1/105 (0%)
 Frame = +3

Query: 3   PVNNVLVIRLSLFQNPQ-TAVNRQPSRRHGSSLPSPLDKYTNSKDDENDINPIITLPSLC 179
           PVNN+ +++   + NP+ +++ +  SRRHGSSLP PLDKY NS D       ++ L   C
Sbjct: 313 PVNNIQIVKRPHYLNPRASSIVQASSRRHGSSLPPPLDKYVNSTDKSIGSTAVVRLQDTC 372

Query: 180 TETPDGLLYYTSHVMSTHIKEFQQQGSSAASEMEME*VRLDSLRW 314
              P  + Y +  V++  IKE QQQGS+AA+EME+E ++LD  ++
Sbjct: 373 -NNPLDVSYVSYQVIANQIKELQQQGSAAAAEMEVERLKLDCAQY 416



 Score = 24.3 bits (51), Expect(2) = 2e-15
 Identities = 8/14 (57%), Positives = 12/14 (85%)
 Frame = +2

Query: 341 EMYEDLHHFCVDEL 382
           +MY++LH  CV+EL
Sbjct: 425 KMYDNLHQLCVNEL 438


>ref|XP_002284832.1| PREDICTED: WD repeat-containing protein 18 [Vitis vinifera]
           gi|302142303|emb|CBI19506.3| unnamed protein product
           [Vitis vinifera]
          Length = 448

 Score = 80.5 bits (197), Expect(2) = 3e-15
 Identities = 44/101 (43%), Positives = 64/101 (63%)
 Frame = +3

Query: 3   PVNNVLVIRLSLFQNPQTAVNRQPSRRHGSSLPSPLDKYTNSKDDENDINPIITLPSLCT 182
           PV+N+LV+R     NP+ +  +  S++HGS L  PLDKY NS D+  D    I   +  +
Sbjct: 316 PVSNILVVRRPNDSNPRNS--QTSSKKHGSFLSPPLDKYLNSSDENEDAKVFIGCQTTFS 373

Query: 183 ETPDGLLYYTSHVMSTHIKEFQQQGSSAASEMEME*VRLDS 305
           ++ D   Y + H++   IKE QQQGSSAA+EMEME +++DS
Sbjct: 374 KSVDAS-YRSCHIIIDQIKELQQQGSSAATEMEMERLKIDS 413



 Score = 27.7 bits (60), Expect(2) = 3e-15
 Identities = 10/14 (71%), Positives = 13/14 (92%)
 Frame = +2

Query: 341 EMYEDLHHFCVDEL 382
           +MYE+LH FCV+EL
Sbjct: 425 KMYENLHQFCVNEL 438


>ref|XP_003551778.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score = 81.6 bits (200), Expect(2) = 1e-14
 Identities = 47/101 (46%), Positives = 65/101 (64%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   PVNNVLVIRLSLFQNPQTAVNRQPS-RRHGSSLPSPLDKYTNSKDDENDINPIITLPSLC 179
           PVNN+LV+R     +   + N Q S R+ GS+LP PL+KY NS DD++D+  +I+L    
Sbjct: 311 PVNNILVVRRENDSSNHISSNVQASSRKQGSNLPPPLEKYANSIDDDSDMKTMISLGGGR 370

Query: 180 TETPDGLLYYTSHVMSTHIKEFQQQGSSAASEMEME*VRLD 302
                   Y +SHV+S +IKE Q QGS+AASEMEME ++ D
Sbjct: 371 KSVDPS--YISSHVISNYIKELQHQGSAAASEMEMEKLKHD 409



 Score = 24.3 bits (51), Expect(2) = 1e-14
 Identities = 12/26 (46%), Positives = 17/26 (65%)
 Frame = +2

Query: 305 LEMAHQ*MKDIMEMYEDLHHFCVDEL 382
           ++MA+Q    + +M E LH FCV EL
Sbjct: 414 VQMANQ----LKKMNEKLHQFCVKEL 435


>ref|XP_003531886.1| PREDICTED: WD repeat-containing protein 18-like [Glycine max]
          Length = 449

 Score = 80.1 bits (196), Expect(2) = 2e-14
 Identities = 47/101 (46%), Positives = 64/101 (63%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   PVNNVLVIRLSLFQNPQTAVNRQPS-RRHGSSLPSPLDKYTNSKDDENDINPIITLPSLC 179
           PVNN+LV+R     +   + N Q S R+ GS+LP PL+KY NS DD+ D+  +I+L    
Sbjct: 311 PVNNILVVRRENDSSNHISSNVQASSRKQGSNLPPPLEKYANSIDDDLDMKTMISLGGGR 370

Query: 180 TETPDGLLYYTSHVMSTHIKEFQQQGSSAASEMEME*VRLD 302
                   Y +SHV+S +IKE Q QGS+AASEMEME ++ D
Sbjct: 371 RSVDPS--YLSSHVISNYIKELQHQGSAAASEMEMEKLKHD 409



 Score = 25.0 bits (53), Expect(2) = 2e-14
 Identities = 12/26 (46%), Positives = 18/26 (69%)
 Frame = +2

Query: 305 LEMAHQ*MKDIMEMYEDLHHFCVDEL 382
           ++MA+Q    + +M E+LH FCV EL
Sbjct: 414 VQMANQ----LKKMNENLHQFCVKEL 435


>ref|XP_002327154.1| predicted protein [Populus trichocarpa] gi|222835469|gb|EEE73904.1|
           predicted protein [Populus trichocarpa]
          Length = 446

 Score = 77.8 bits (190), Expect(2) = 5e-14
 Identities = 46/101 (45%), Positives = 63/101 (62%), Gaps = 1/101 (0%)
 Frame = +3

Query: 3   PVNNVLVIRLSLFQNPQTAVNRQPS-RRHGSSLPSPLDKYTNSKDDENDINPIITLPSLC 179
           PVNN+ V+    + NP++  N Q S RRHG SLP PL KY N+ D E  I+  + L + C
Sbjct: 312 PVNNIHVLNRPAYLNPRSLSNVQASSRRHGLSLPPPLSKYINTMD-EKVISAAVNLQATC 370

Query: 180 TETPDGLLYYTSHVMSTHIKEFQQQGSSAASEMEME*VRLD 302
               D     +S V++  IKE QQQGS+AA+EME+E ++LD
Sbjct: 371 NNPLDASCI-SSQVINCQIKELQQQGSAAAAEMEVEKLKLD 410



 Score = 26.2 bits (56), Expect(2) = 5e-14
 Identities = 9/12 (75%), Positives = 11/12 (91%)
 Frame = +2

Query: 347 YEDLHHFCVDEL 382
           Y++LH FCVDEL
Sbjct: 425 YDNLHEFCVDEL 436