BLASTX nr result

ID: Coptis24_contig00013351 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013351
         (987 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271636.1| PREDICTED: probable CCR4-associated factor 1...   384   e-104
ref|XP_003540260.1| PREDICTED: probable CCR4-associated factor 1...   378   e-102
emb|CAN76920.1| hypothetical protein VITISV_015622 [Vitis vinifera]   377   e-102
ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|2...   375   e-102
ref|XP_002523862.1| ccr4-associated factor, putative [Ricinus co...   375   e-101

>ref|XP_002271636.1| PREDICTED: probable CCR4-associated factor 1 homolog 9-like [Vitis
           vinifera]
          Length = 278

 Score =  384 bits (986), Expect = e-104
 Identities = 182/270 (67%), Positives = 228/270 (84%), Gaps = 1/270 (0%)
 Frame = -2

Query: 908 SQKPIIIRKVWASNLEAEFQLIQKTLAQHPFISMDTEFPGIVVKPITTKPHYP-KTPYEN 732
           + KP++IR+VWA NLE+EF+LI   + Q+PFISMDTEFPG+V +P   +  +  + P ++
Sbjct: 9   NSKPVMIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQFRLRRPSDH 68

Query: 731 YYFLKANVDALNLIQIGLTLTDSAGNLPDLGTDGYRYIWEFNFREFDILKDNYALDSIEL 552
           Y FLK+NVDAL LIQ+GLTL+D+ GNLPDLGT G R+IWEFNFR+FD+ +D +A DSIEL
Sbjct: 69  YRFLKSNVDALCLIQVGLTLSDANGNLPDLGT-GNRFIWEFNFRDFDVARDAHAPDSIEL 127

Query: 551 LKKQGIDFEKNRVDGVDSYRFAQLMLSSGLVCNESVSWVTFHSAYDFGYLVKILTRNTLP 372
           L +QGIDF++NR +GVDS RFA+LM+SSGLVCNESVSWVTFHSAYDFGYLVKILTR +LP
Sbjct: 128 LSRQGIDFDRNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLP 187

Query: 371 GDVLEFLKLLRVIFGNKIYDVKHIIKFCDSLFGGLDRVSRTLQVGRVAGKCHQAGSDSLL 192
             + EFL +LRV FG K+YDVKH++KFC SL+GGLDRV+RTL+V R  GKCHQAGSDSLL
Sbjct: 188 SGLEEFLSILRVFFGTKVYDVKHLMKFCASLYGGLDRVARTLEVDRAVGKCHQAGSDSLL 247

Query: 191 TWHAFQRIKEIYFAKGGLEKHAGFLFGLEL 102
           TWHAFQ+I+++YF K G EK+AG L+GLE+
Sbjct: 248 TWHAFQKIRDVYFEKDGTEKYAGVLYGLEV 277


>ref|XP_003540260.1| PREDICTED: probable CCR4-associated factor 1 homolog 11-like
           [Glycine max]
          Length = 309

 Score =  378 bits (971), Expect = e-102
 Identities = 182/270 (67%), Positives = 225/270 (83%), Gaps = 3/270 (1%)
 Frame = -2

Query: 902 KPIIIRKVWASNLEAEFQLIQKTLAQHPFISMDTEFPGIVVKPIT---TKPHYPKTPYEN 732
           K I+IR+VWASNLE+EFQLI++ +  +PFISMDTEFPG+V +P T   TKP+ P  P  +
Sbjct: 38  KTILIREVWASNLESEFQLIRQVIDDYPFISMDTEFPGVVFRPHTVDPTKPYLP--PSVH 95

Query: 731 YYFLKANVDALNLIQIGLTLTDSAGNLPDLGTDGYRYIWEFNFREFDILKDNYALDSIEL 552
           Y FLK+NVDALNLIQIGLTL+DS GNLP LGT   R+IWEFNFR+FD+ +D +A DSI+L
Sbjct: 96  YRFLKSNVDALNLIQIGLTLSDSNGNLPHLGTAN-RFIWEFNFRDFDVERDAHAPDSIDL 154

Query: 551 LKKQGIDFEKNRVDGVDSYRFAQLMLSSGLVCNESVSWVTFHSAYDFGYLVKILTRNTLP 372
           L++QGIDF +N  +GVDSY FA+L++SSGLVCN+SVSWVTFHSAYDFGYLVKILTR +LP
Sbjct: 155 LRRQGIDFRRNAAEGVDSYLFAELVMSSGLVCNDSVSWVTFHSAYDFGYLVKILTRRSLP 214

Query: 371 GDVLEFLKLLRVIFGNKIYDVKHIIKFCDSLFGGLDRVSRTLQVGRVAGKCHQAGSDSLL 192
             + EFL +LR  FGN +YD+KH+++FCD+L GGLDR++RTL V R  GKCHQAGSDSLL
Sbjct: 215 SGLEEFLNMLRAFFGNNVYDIKHMMRFCDTLHGGLDRLARTLNVDRAVGKCHQAGSDSLL 274

Query: 191 TWHAFQRIKEIYFAKGGLEKHAGFLFGLEL 102
           TWHAFQ++++IYF   G +KHAG LFGLEL
Sbjct: 275 TWHAFQKMRDIYFVTDGPQKHAGVLFGLEL 304


>emb|CAN76920.1| hypothetical protein VITISV_015622 [Vitis vinifera]
          Length = 265

 Score =  377 bits (967), Expect = e-102
 Identities = 179/265 (67%), Positives = 224/265 (84%), Gaps = 1/265 (0%)
 Frame = -2

Query: 893 IIRKVWASNLEAEFQLIQKTLAQHPFISMDTEFPGIVVKPITTKPHYP-KTPYENYYFLK 717
           +IR+VWA NLE+EF+LI   + Q+PFISMDTEFPG+V +P   +  +  + P ++Y FLK
Sbjct: 1   MIREVWAENLESEFELISDLIDQYPFISMDTEFPGVVFRPSGGEQQFRLRRPSDHYRFLK 60

Query: 716 ANVDALNLIQIGLTLTDSAGNLPDLGTDGYRYIWEFNFREFDILKDNYALDSIELLKKQG 537
           +NVDAL LIQ+GLTL+D+ GNLPDLGT G R+IWEFNFR+FD+ +D ++ DSIELL +QG
Sbjct: 61  SNVDALCLIQVGLTLSDANGNLPDLGT-GNRFIWEFNFRDFDVARDAHSPDSIELLSRQG 119

Query: 536 IDFEKNRVDGVDSYRFAQLMLSSGLVCNESVSWVTFHSAYDFGYLVKILTRNTLPGDVLE 357
           IDF++NR +GVDS RFA+LM+SSGLVCNESVSWVTFHSAYDFGYLVKILTR +LP  + E
Sbjct: 120 IDFDRNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRSLPSGLEE 179

Query: 356 FLKLLRVIFGNKIYDVKHIIKFCDSLFGGLDRVSRTLQVGRVAGKCHQAGSDSLLTWHAF 177
           FL +LRV FG K+YDVKH++KFC SL+GGLDRV+RTL+V R  GKCHQAGSDSLLTWHAF
Sbjct: 180 FLSILRVFFGTKVYDVKHLMKFCASLYGGLDRVARTLEVDRAVGKCHQAGSDSLLTWHAF 239

Query: 176 QRIKEIYFAKGGLEKHAGFLFGLEL 102
           Q+I+++YF K G EK+AG L+GLE+
Sbjct: 240 QKIRDVYFEKDGTEKYAGVLYGLEV 264


>ref|XP_002328114.1| predicted protein [Populus trichocarpa] gi|222837629|gb|EEE75994.1|
           predicted protein [Populus trichocarpa]
          Length = 277

 Score =  375 bits (964), Expect = e-102
 Identities = 181/272 (66%), Positives = 228/272 (83%), Gaps = 5/272 (1%)
 Frame = -2

Query: 902 KPIIIRKVWASNLEAEFQLIQKTLAQHPFISMDTEFPGIVVKPI---TTKPHYPKT--PY 738
           K I+IR+VW+ NLE+EF+LI+  + + PFISMDTEFPG+V +P    T   +Y +   P 
Sbjct: 5   KEIVIREVWSCNLESEFELIRDLIDEFPFISMDTEFPGVVFRPPVDPTNNRNYFRQLKPS 64

Query: 737 ENYYFLKANVDALNLIQIGLTLTDSAGNLPDLGTDGYRYIWEFNFREFDILKDNYALDSI 558
           ++Y  LK+NVDALNLIQ+GLTL+D+ GNLPDLGT G R+IWEFNFR+FD+ +D++A DSI
Sbjct: 65  DHYKILKSNVDALNLIQVGLTLSDAEGNLPDLGT-GNRFIWEFNFRDFDVERDSHAPDSI 123

Query: 557 ELLKKQGIDFEKNRVDGVDSYRFAQLMLSSGLVCNESVSWVTFHSAYDFGYLVKILTRNT 378
           ELL++QGIDFE+NR +GVDS RFA+LM+SSGLVCNESVSWVTFHSAYDFGYLVKILTR  
Sbjct: 124 ELLRRQGIDFERNREEGVDSARFAELMMSSGLVCNESVSWVTFHSAYDFGYLVKILTRRE 183

Query: 377 LPGDVLEFLKLLRVIFGNKIYDVKHIIKFCDSLFGGLDRVSRTLQVGRVAGKCHQAGSDS 198
           LP  ++ FL LLRV FGN IYDVKH+++FC SL+GGLDRV+RTL+V R  GKCHQAGSDS
Sbjct: 184 LPSGLVGFLSLLRVFFGNNIYDVKHMMRFCKSLYGGLDRVARTLEVNREVGKCHQAGSDS 243

Query: 197 LLTWHAFQRIKEIYFAKGGLEKHAGFLFGLEL 102
           LLTWHAFQ++++++F K G E+HAG L+GLE+
Sbjct: 244 LLTWHAFQKMRDVFFVKDGPEQHAGVLYGLEV 275


>ref|XP_002523862.1| ccr4-associated factor, putative [Ricinus communis]
           gi|223536950|gb|EEF38588.1| ccr4-associated factor,
           putative [Ricinus communis]
          Length = 281

 Score =  375 bits (962), Expect = e-101
 Identities = 180/283 (63%), Positives = 230/283 (81%), Gaps = 3/283 (1%)
 Frame = -2

Query: 938 LVLKTMSSLISQ---KPIIIRKVWASNLEAEFQLIQKTLAQHPFISMDTEFPGIVVKPIT 768
           ++L+  S  +S    KP+IIR VW+ NLE+EFQLI+  +   P ISMDTEFPG+V K   
Sbjct: 1   MILQHSSRSVSSNHNKPVIIRDVWSHNLESEFQLIRDLIDDFPIISMDTEFPGLVFK--- 57

Query: 767 TKPHYPKTPYENYYFLKANVDALNLIQIGLTLTDSAGNLPDLGTDGYRYIWEFNFREFDI 588
             PH+ + P ++Y  LK+NVDALNLIQ+GLTL+DS GNLPDL T   R+IWEFNFR+FD+
Sbjct: 58  -NPHHSRRPSDHYTLLKSNVDALNLIQVGLTLSDSRGNLPDLAT-ATRFIWEFNFRDFDV 115

Query: 587 LKDNYALDSIELLKKQGIDFEKNRVDGVDSYRFAQLMLSSGLVCNESVSWVTFHSAYDFG 408
            +D +A DSIELL++QGIDF +N  +G+ S RFA+LM+SSGLVCN+SVSWVTFHSAYDFG
Sbjct: 116 SRDAHAPDSIELLRRQGIDFRRNTQEGIPSARFAELMMSSGLVCNDSVSWVTFHSAYDFG 175

Query: 407 YLVKILTRNTLPGDVLEFLKLLRVIFGNKIYDVKHIIKFCDSLFGGLDRVSRTLQVGRVA 228
           YLVKILTR +LPG + EF++L++V FG+++YDVKHI++FC SL+GGLDRV+RTL+V R  
Sbjct: 176 YLVKILTRRSLPGGLEEFMRLVKVFFGDRVYDVKHIMRFCHSLYGGLDRVARTLEVDRAV 235

Query: 227 GKCHQAGSDSLLTWHAFQRIKEIYFAKGGLEKHAGFLFGLELV 99
           GKCHQAGSDSLLTWHAFQ+++++YF K G EKHAG L+GLE V
Sbjct: 236 GKCHQAGSDSLLTWHAFQKMRDVYFHKEGPEKHAGVLYGLEEV 278


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