BLASTX nr result
ID: Coptis24_contig00013347
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013347 (1105 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containi... 360 3e-97 emb|CBI25024.3| unnamed protein product [Vitis vinifera] 360 5e-97 ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi... 360 5e-97 ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containi... 347 4e-93 gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Ja... 344 3e-92 >ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Glycine max] Length = 618 Score = 360 bits (925), Expect = 3e-97 Identities = 167/244 (68%), Positives = 204/244 (83%) Frame = +2 Query: 2 RDPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELG 181 R ++ P+V HYSCM+D+LGRAG + +A+ LIE MP AT SMWGSLL SCKI+GN+E Sbjct: 375 RQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFA 434 Query: 182 EIAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDK 361 EIAAK+LF MEP+N GNH+LL+NIYAANK W +VAR+RKLL+++ VRKE G SWIE+K+K Sbjct: 435 EIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNK 494 Query: 362 VHTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKL 541 +H+F VGER HP+I DIYAKLD LV E+KKL+YK DT +DLHDVE +K+ LLRHHSEKL Sbjct: 495 IHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKL 554 Query: 542 ALAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSC 721 A+ FGL+ LP +PIRI KNLRICGDCH+F+KLVSK T+R IIVRDTNRFHHF+DG CSC Sbjct: 555 AITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDGFCSC 614 Query: 722 RDFW 733 +FW Sbjct: 615 GEFW 618 >emb|CBI25024.3| unnamed protein product [Vitis vinifera] Length = 621 Score = 360 bits (923), Expect = 5e-97 Identities = 169/241 (70%), Positives = 198/241 (82%) Frame = +2 Query: 11 DVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELGEIA 190 +V PNV HYSCMVD+LGRAG + EA I+ MP +AT SMWGSLL SC+I+ NLEL E+A Sbjct: 381 NVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVA 440 Query: 191 AKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDKVHT 370 AKHLF +EP N GNHVLLSNIYAAN W +VAR+R LLK+S +KE GKSWIE+K KVH+ Sbjct: 441 AKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHS 500 Query: 371 FVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKLALA 550 F+VGER HPRI +IY KL+ LV EMKK+ YKA T+HDLHDVE ++K+ELLRHHSEKLAL Sbjct: 501 FMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALT 560 Query: 551 FGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSCRDF 730 FG++ LP G PIRI KNLRICGDCHSF+KL S IT R IIVRDTNRFHHF++G CSC +F Sbjct: 561 FGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEF 620 Query: 731 W 733 W Sbjct: 621 W 621 >ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Vitis vinifera] Length = 594 Score = 360 bits (923), Expect = 5e-97 Identities = 169/241 (70%), Positives = 198/241 (82%) Frame = +2 Query: 11 DVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELGEIA 190 +V PNV HYSCMVD+LGRAG + EA I+ MP +AT SMWGSLL SC+I+ NLEL E+A Sbjct: 354 NVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVA 413 Query: 191 AKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDKVHT 370 AKHLF +EP N GNHVLLSNIYAAN W +VAR+R LLK+S +KE GKSWIE+K KVH+ Sbjct: 414 AKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHS 473 Query: 371 FVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKLALA 550 F+VGER HPRI +IY KL+ LV EMKK+ YKA T+HDLHDVE ++K+ELLRHHSEKLAL Sbjct: 474 FMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALT 533 Query: 551 FGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSCRDF 730 FG++ LP G PIRI KNLRICGDCHSF+KL S IT R IIVRDTNRFHHF++G CSC +F Sbjct: 534 FGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEF 593 Query: 731 W 733 W Sbjct: 594 W 594 >ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like [Brachypodium distachyon] Length = 631 Score = 347 bits (889), Expect = 4e-93 Identities = 163/243 (67%), Positives = 193/243 (79%) Frame = +2 Query: 5 DPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELGE 184 D V PNV HYSCMVD+LGR+GK +EA L+ MP E T SMWGSLLGSC+ + N+ L Sbjct: 389 DRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLAR 448 Query: 185 IAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDKV 364 IAA+ LF +EPDNGGNHVLLSN+YAA+ W +V +RK LKDSG +KEMG+SWIE K KV Sbjct: 449 IAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKV 508 Query: 365 HTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKLA 544 H FVVGER+HPRITDIY KL+++ EM+K + + DLHDV QKEELL+HHSEKLA Sbjct: 509 HVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLA 568 Query: 545 LAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSCR 724 L+FGLISLPS +PI I KNLRICGDCHSF+K+ + IT R +IVRDTNRFHHF+DGSCSC Sbjct: 569 LSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCG 628 Query: 725 DFW 733 DFW Sbjct: 629 DFW 631 >gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group] gi|125535837|gb|EAY82325.1| hypothetical protein OsI_37535 [Oryza sativa Indica Group] gi|125578563|gb|EAZ19709.1| hypothetical protein OsJ_35285 [Oryza sativa Japonica Group] Length = 630 Score = 344 bits (882), Expect = 3e-92 Identities = 160/243 (65%), Positives = 193/243 (79%) Frame = +2 Query: 5 DPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELGE 184 D PNV HYSCMVD+LGR+GK +EA L++ MP E T SMWGSLLGS +IH N+ L Sbjct: 388 DRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLAR 447 Query: 185 IAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDKV 364 IAA+ LF +EP+NGGNHVLLSN+YAA+ W +V +RK L+DSG +KEMG+SWIE K K+ Sbjct: 448 IAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKI 507 Query: 365 HTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKLA 544 H FV GEREHP ITD+Y KL+++ EM+K+ ++A+T DLHDV QKEELL+HHSEKLA Sbjct: 508 HVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLA 567 Query: 545 LAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSCR 724 AFGLISLP +PI I KNLRICGDCHSF+K+VS IT R +IVRD NRFHHF+DGSCSC Sbjct: 568 FAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCG 627 Query: 725 DFW 733 DFW Sbjct: 628 DFW 630