BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013347
         (1105 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containi...   360   3e-97
emb|CBI25024.3| unnamed protein product [Vitis vinifera]              360   5e-97
ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containi...   360   5e-97
ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containi...   347   4e-93
gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Ja...   344   3e-92

>ref|XP_003555883.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
            [Glycine max]
          Length = 618

 Score =  360 bits (925), Expect = 3e-97
 Identities = 167/244 (68%), Positives = 204/244 (83%)
 Frame = +2

Query: 2    RDPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELG 181
            R  ++ P+V HYSCM+D+LGRAG + +A+ LIE MP  AT SMWGSLL SCKI+GN+E  
Sbjct: 375  RQHNLSPSVLHYSCMIDILGRAGLVHKAYDLIERMPFNATSSMWGSLLASCKIYGNIEFA 434

Query: 182  EIAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDK 361
            EIAAK+LF MEP+N GNH+LL+NIYAANK W +VAR+RKLL+++ VRKE G SWIE+K+K
Sbjct: 435  EIAAKYLFEMEPNNAGNHILLANIYAANKKWDEVARARKLLRETDVRKERGTSWIEIKNK 494

Query: 362  VHTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKL 541
            +H+F VGER HP+I DIYAKLD LV E+KKL+YK DT +DLHDVE  +K+ LLRHHSEKL
Sbjct: 495  IHSFTVGERNHPQIDDIYAKLDNLVVELKKLNYKVDTSNDLHDVEENRKQMLLRHHSEKL 554

Query: 542  ALAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSC 721
            A+ FGL+ LP  +PIRI KNLRICGDCH+F+KLVSK T+R IIVRDTNRFHHF+DG CSC
Sbjct: 555  AITFGLMCLPRDIPIRIIKNLRICGDCHTFMKLVSKSTSREIIVRDTNRFHHFKDGFCSC 614

Query: 722  RDFW 733
             +FW
Sbjct: 615  GEFW 618


>emb|CBI25024.3| unnamed protein product [Vitis vinifera]
          Length = 621

 Score =  360 bits (923), Expect = 5e-97
 Identities = 169/241 (70%), Positives = 198/241 (82%)
 Frame = +2

Query: 11   DVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELGEIA 190
            +V PNV HYSCMVD+LGRAG + EA   I+ MP +AT SMWGSLL SC+I+ NLEL E+A
Sbjct: 381  NVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVA 440

Query: 191  AKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDKVHT 370
            AKHLF +EP N GNHVLLSNIYAAN  W +VAR+R LLK+S  +KE GKSWIE+K KVH+
Sbjct: 441  AKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHS 500

Query: 371  FVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKLALA 550
            F+VGER HPRI +IY KL+ LV EMKK+ YKA T+HDLHDVE ++K+ELLRHHSEKLAL 
Sbjct: 501  FMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALT 560

Query: 551  FGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSCRDF 730
            FG++ LP G PIRI KNLRICGDCHSF+KL S IT R IIVRDTNRFHHF++G CSC +F
Sbjct: 561  FGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEF 620

Query: 731  W 733
            W
Sbjct: 621  W 621


>ref|XP_002269452.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
            [Vitis vinifera]
          Length = 594

 Score =  360 bits (923), Expect = 5e-97
 Identities = 169/241 (70%), Positives = 198/241 (82%)
 Frame = +2

Query: 11   DVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELGEIA 190
            +V PNV HYSCMVD+LGRAG + EA   I+ MP +AT SMWGSLL SC+I+ NLEL E+A
Sbjct: 354  NVSPNVLHYSCMVDILGRAGLLHEAKDFIDRMPFDATASMWGSLLASCRIYRNLELAEVA 413

Query: 191  AKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDKVHT 370
            AKHLF +EP N GNHVLLSNIYAAN  W +VAR+R LLK+S  +KE GKSWIE+K KVH+
Sbjct: 414  AKHLFEIEPHNAGNHVLLSNIYAANDRWEEVARARNLLKESKAKKERGKSWIEIKHKVHS 473

Query: 371  FVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKLALA 550
            F+VGER HPRI +IY KL+ LV EMKK+ YKA T+HDLHDVE ++K+ELLRHHSEKLAL 
Sbjct: 474  FMVGERNHPRIVEIYLKLEDLVGEMKKIGYKAKTEHDLHDVEESRKQELLRHHSEKLALT 533

Query: 551  FGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSCRDF 730
            FG++ LP G PIRI KNLRICGDCHSF+KL S IT R IIVRDTNRFHHF++G CSC +F
Sbjct: 534  FGIMVLPHGAPIRIMKNLRICGDCHSFMKLASSITEREIIVRDTNRFHHFKNGYCSCGEF 593

Query: 731  W 733
            W
Sbjct: 594  W 594


>ref|XP_003578890.1| PREDICTED: pentatricopeptide repeat-containing protein At5g04780-like
            [Brachypodium distachyon]
          Length = 631

 Score =  347 bits (889), Expect = 4e-93
 Identities = 163/243 (67%), Positives = 193/243 (79%)
 Frame = +2

Query: 5    DPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELGE 184
            D  V PNV HYSCMVD+LGR+GK +EA  L+  MP E T SMWGSLLGSC+ + N+ L  
Sbjct: 389  DRTVEPNVLHYSCMVDVLGRSGKTDEAWELLNKMPFEPTASMWGSLLGSCRNYNNIRLAR 448

Query: 185  IAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDKV 364
            IAA+ LF +EPDNGGNHVLLSN+YAA+  W +V  +RK LKDSG +KEMG+SWIE K KV
Sbjct: 449  IAAEQLFQLEPDNGGNHVLLSNVYAASGNWENVLMARKYLKDSGAKKEMGRSWIEAKGKV 508

Query: 365  HTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKLA 544
            H FVVGER+HPRITDIY KL+++  EM+K   +   + DLHDV   QKEELL+HHSEKLA
Sbjct: 509  HVFVVGERKHPRITDIYNKLEEIYHEMRKFARRTSIECDLHDVHAEQKEELLKHHSEKLA 568

Query: 545  LAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSCR 724
            L+FGLISLPS +PI I KNLRICGDCHSF+K+ + IT R +IVRDTNRFHHF+DGSCSC 
Sbjct: 569  LSFGLISLPSNIPIIIHKNLRICGDCHSFMKIAAHITERLVIVRDTNRFHHFKDGSCSCG 628

Query: 725  DFW 733
            DFW
Sbjct: 629  DFW 631


>gb|ABA96502.1| SEC14 cytosolic factor, putative [Oryza sativa Japonica Group]
            gi|125535837|gb|EAY82325.1| hypothetical protein
            OsI_37535 [Oryza sativa Indica Group]
            gi|125578563|gb|EAZ19709.1| hypothetical protein
            OsJ_35285 [Oryza sativa Japonica Group]
          Length = 630

 Score =  344 bits (882), Expect = 3e-92
 Identities = 160/243 (65%), Positives = 193/243 (79%)
 Frame = +2

Query: 5    DPDVYPNVQHYSCMVDLLGRAGKIEEAHCLIETMPLEATPSMWGSLLGSCKIHGNLELGE 184
            D    PNV HYSCMVD+LGR+GK +EA  L++ MP E T SMWGSLLGS +IH N+ L  
Sbjct: 388  DRTAEPNVLHYSCMVDVLGRSGKTDEAWKLLDKMPFEPTASMWGSLLGSSRIHKNIRLAR 447

Query: 185  IAAKHLFHMEPDNGGNHVLLSNIYAANKMWLDVARSRKLLKDSGVRKEMGKSWIEVKDKV 364
            IAA+ LF +EP+NGGNHVLLSN+YAA+  W +V  +RK L+DSG +KEMG+SWIE K K+
Sbjct: 448  IAAEQLFRLEPENGGNHVLLSNVYAASGNWENVVVARKYLRDSGAKKEMGRSWIEAKGKI 507

Query: 365  HTFVVGEREHPRITDIYAKLDKLVEEMKKLDYKADTDHDLHDVEVAQKEELLRHHSEKLA 544
            H FV GEREHP ITD+Y KL+++  EM+K+ ++A+T  DLHDV   QKEELL+HHSEKLA
Sbjct: 508  HVFVAGEREHPGITDVYNKLEEIYHEMRKISHRANTQCDLHDVHADQKEELLKHHSEKLA 567

Query: 545  LAFGLISLPSGMPIRIKKNLRICGDCHSFIKLVSKITARAIIVRDTNRFHHFRDGSCSCR 724
             AFGLISLP  +PI I KNLRICGDCHSF+K+VS IT R +IVRD NRFHHF+DGSCSC 
Sbjct: 568  FAFGLISLPPNIPITIYKNLRICGDCHSFMKIVSCITERQVIVRDINRFHHFKDGSCSCG 627

Query: 725  DFW 733
            DFW
Sbjct: 628  DFW 630