BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013346
         (1041 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264...   208   2e-51
emb|CAN79595.1| hypothetical protein VITISV_007038 [Vitis vinifera]   208   2e-51
ref|XP_002518375.1| ring finger protein, putative [Ricinus commu...   198   2e-48
ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|2...   167   3e-39
emb|CBI20233.3| unnamed protein product [Vitis vinifera]              159   8e-37

>ref|XP_002282878.1| PREDICTED: uncharacterized protein LOC100264059 [Vitis vinifera]
          Length = 543

 Score =  208 bits (529), Expect = 2e-51
 Identities = 122/323 (37%), Positives = 186/323 (57%), Gaps = 11/323 (3%)
 Frame = +1

Query: 58  MGERNMVCTSQVVDMDIDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMH 237
           MG+RNM+CT Q++D+ +D++ QGH    H   V N    P P+M+ +LSA G++SN D+ 
Sbjct: 1   MGQRNMMCTGQMIDLQMDERNQGH----HVISVTN---FPQPNMHSMLSAPGNSSNFDVR 53

Query: 238 HFANSHD-SSMFYG-SHFNGLQHRNPVTNMDLGVS--SNFHSPCMIPPPVNRVFPIS--H 399
           H    +D S+MFYG   +NG+QH +PV ++D+GV+  SN ++P + P   NR FP+S  H
Sbjct: 54  HLPEHYDGSAMFYGIGQYNGVQHHHPVPSLDIGVAPGSNIYNPYLTPSSGNRGFPVSINH 113

Query: 400 VSCDQLPYSSHHGIAAVGISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXX 579
              DQLP SS+HG+  V   ++G  + FMDGVR + KRKNAEG+ G++ ++N        
Sbjct: 114 GPSDQLPSSSNHGVIGVSTDEYGRENHFMDGVRGACKRKNAEGILGNFQYINGLASSSS- 172

Query: 580 XLCIPPPSVGILQSEGQLESGAAVLEATASVPPEY-GVNGVSLI-XXXXXXXXXXXXXLQ 753
              +PP       +   LESG +++++ +   P+Y G N  S++              + 
Sbjct: 173 --SVPP------FNTRHLESGVSMMDSASFAQPQYRGNNAPSIMEVGSHRSVRNRSGAVG 224

Query: 754 VESPMLLNPNHLAQGNYINQSFQPAA--WVEQQFGXXXXXXXXXXWNYTP-MHYLNGRNV 924
           ++S +  N NHL QGNYI   FQP+   WV+QQ G          WN+ P + YL+G N+
Sbjct: 225 LDSVLAHNHNHLVQGNYIGHPFQPSGNPWVDQQSGNNGSDGGTLAWNHGPALPYLHGSNI 284

Query: 925 NGVSSEIASMGGQGYADAMNSRN 993
           +G S E  ++G QGY D  + R+
Sbjct: 285 SGGSREAGNVGIQGYHDTSSGRS 307


>emb|CAN79595.1| hypothetical protein VITISV_007038 [Vitis vinifera]
          Length = 656

 Score =  208 bits (529), Expect = 2e-51
 Identities = 122/323 (37%), Positives = 186/323 (57%), Gaps = 11/323 (3%)
 Frame = +1

Query: 58  MGERNMVCTSQVVDMDIDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMH 237
           MG+RNM+CT Q++D+ +D++ QGH    H   V N    P P+M+ +LSA G++SN D+ 
Sbjct: 1   MGQRNMMCTGQMIDLQMDERNQGH----HVISVTN---FPQPNMHSMLSAPGNSSNFDVR 53

Query: 238 HFANSHD-SSMFYG-SHFNGLQHRNPVTNMDLGVS--SNFHSPCMIPPPVNRVFPIS--H 399
           H    +D S+MFYG   +NG+QH +PV ++D+GV+  SN ++P + P   NR FP+S  H
Sbjct: 54  HLPEHYDGSAMFYGIGQYNGVQHHHPVPSLDIGVAPGSNIYNPYLTPSSGNRGFPVSINH 113

Query: 400 VSCDQLPYSSHHGIAAVGISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXX 579
              DQLP SS+HG+  V   ++G  + FMDGVR + KRKNAEG+ G++ ++N        
Sbjct: 114 GPSDQLPSSSNHGVIGVSTDEYGRENHFMDGVRGACKRKNAEGILGNFQYINGLASSSS- 172

Query: 580 XLCIPPPSVGILQSEGQLESGAAVLEATASVPPEY-GVNGVSLI-XXXXXXXXXXXXXLQ 753
              +PP       +   LESG +++++ +   P+Y G N  S++              + 
Sbjct: 173 --SVPP------FNTRHLESGVSMMDSASFAQPQYRGNNAPSIMEVGSHRSVRNRSGAVG 224

Query: 754 VESPMLLNPNHLAQGNYINQSFQPAA--WVEQQFGXXXXXXXXXXWNYTP-MHYLNGRNV 924
           ++S +  N NHL QGNYI   FQP+   WV+QQ G          WN+ P + YL+G N+
Sbjct: 225 LDSVLAHNHNHLVQGNYIGHPFQPSGNPWVDQQSGNNGSDGGTLAWNHGPALPYLHGSNI 284

Query: 925 NGVSSEIASMGGQGYADAMNSRN 993
           +G S E  ++G QGY D  + R+
Sbjct: 285 SGGSREAGNVGIQGYHDTSSGRS 307


>ref|XP_002518375.1| ring finger protein, putative [Ricinus communis]
           gi|223542470|gb|EEF44011.1| ring finger protein,
           putative [Ricinus communis]
          Length = 549

 Score =  198 bits (503), Expect = 2e-48
 Identities = 115/322 (35%), Positives = 177/322 (54%), Gaps = 10/322 (3%)
 Frame = +1

Query: 58  MGERNMVCTSQVVDMDIDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMH 237
           MG+RNM+CTSQ++D+++D+Q QG++HP+ C  +G  ++ P   +  +++ASGS +NID H
Sbjct: 1   MGQRNMLCTSQMIDLEVDRQGQGYLHPEPCILLGGVSNFPQSDIQTMVTASGSTTNIDAH 60

Query: 238 HFANSHDSSMFYG-SHFNGLQH--RNPVTNMDLGV--SSNFHSPCMIPPPVNRVFPISHV 402
                +DS++FYG   ++G+QH  ++   N+DLGV  +SNF+ P M P   +   P+SH 
Sbjct: 61  RLPEHYDSAIFYGMPQYHGVQHHPQHHAPNLDLGVATASNFYVPYMTP---SSGIPLSHG 117

Query: 403 SCDQLPYSSHHGIAAVGISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXXX 582
           SCD LP S+ +G+  V   ++G N+ FMD  R S KRKNAEG PG++ +VN         
Sbjct: 118 SCDHLPSSTSYGVIGVSGDEYGMNNHFMDNARGSYKRKNAEGNPGNFQYVNASAGSSSSV 177

Query: 583 LCIPPPSVGILQSEGQLESGAAVLEATASVPPEYGVNGVSLI--XXXXXXXXXXXXXLQV 756
           L    P             G ++++A++   P+Y  NG+  I                 +
Sbjct: 178 LSTRHP------------DGISLMDASSFASPQYRGNGILSIREVGSHRSVRNRSGATGL 225

Query: 757 ESPMLLNPNHLAQGNYINQSFQPAA--WVEQQFGXXXXXXXXXXWNYTP-MHYLNGRNVN 927
           ES +  + NH  QGNYI Q FQPA   W +Q             WN  P ++Y++G NVN
Sbjct: 226 ESVLAHSQNHFIQGNYIGQPFQPAGSLWADQH--SSSSDAGTLAWNQNPAINYMHGNNVN 283

Query: 928 GVSSEIASMGGQGYADAMNSRN 993
           G S E  S+  Q Y +  ++R+
Sbjct: 284 GGSVETGSIVPQRYHELSSNRS 305


>ref|XP_002298898.1| predicted protein [Populus trichocarpa] gi|222846156|gb|EEE83703.1|
           predicted protein [Populus trichocarpa]
          Length = 535

 Score =  167 bits (424), Expect = 3e-39
 Identities = 101/306 (33%), Positives = 159/306 (51%), Gaps = 10/306 (3%)
 Frame = +1

Query: 106 IDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMHHFANSHDSSMFYGS-H 282
           +DQQ+QG++HP+ C  +G   +   P +  +L+ASG+  N D H  A+ +D +MFYG   
Sbjct: 1   MDQQSQGYLHPESCILLGGVTNFRPPDIPTMLTASGNTINRDAH-LADRYDGAMFYGMPQ 59

Query: 283 FNGL----QHRNPVTNMDLGVSSNFHSPCMIPPPVNRVFPISHVSCDQLPYSSHHGIAAV 450
           ++G+    Q+ +P  ++ +  + NF+ P M P   +   PISH SCDQL  S+++G+  V
Sbjct: 60  YHGVHPHPQYHSPNLDLSVATAPNFYVPYMTP---SSGIPISHASCDQLSSSNNYGVIGV 116

Query: 451 GISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXXXLCIPPPSVGILQSEGQ 630
              ++G N  FMD  R+S KRKNAEG PG++ ++N           +PP +        +
Sbjct: 117 SADEYGTNSHFMDNARSSYKRKNAEGNPGNFHYLNASASSSS---SVPPMNT-------R 166

Query: 631 LESGAAVLEATASVPPEYGVNGVSLI--XXXXXXXXXXXXXLQVESPMLLNPNHLAQGNY 804
              G A+++AT+   P Y     S I               + ++  +  NPNH  QGNY
Sbjct: 167 HPEGVALMDATSFTLPHYRGTSASSIREVGSQRSVRNRLGSVGLDPALTHNPNHFIQGNY 226

Query: 805 INQSFQP--AAWVEQQFGXXXXXXXXXXWNYTP-MHYLNGRNVNGVSSEIASMGGQGYAD 975
           + Q +QP  + W+EQ             W  TP + Y++G NVNGV  E  SMG Q Y +
Sbjct: 227 LGQPYQPGGSLWLEQHLSNGSTDAGASVWTQTPTIPYMHGNNVNGVPIETGSMGPQRYHE 286

Query: 976 AMNSRN 993
             ++R+
Sbjct: 287 PASNRS 292


>emb|CBI20233.3| unnamed protein product [Vitis vinifera]
          Length = 489

 Score =  159 bits (403), Expect = 8e-37
 Identities = 112/340 (32%), Positives = 161/340 (47%), Gaps = 29/340 (8%)
 Frame = +1

Query: 58  MGERNMVCTSQVVDMDIDQQAQGHIHPDHCFFVGNNAHLPHPSMYPVLSASGSASNIDMH 237
           MG+RNM+CT Q++D+ +D++ QGH    H   V N    P P+M+ +LSA G++SN D+ 
Sbjct: 1   MGQRNMMCTGQMIDLQMDERNQGH----HVISVTN---FPQPNMHSMLSAPGNSSNFDVR 53

Query: 238 HFANSHD-SSMFYG-SHFNGLQHRNPVTNMDLGVSSNFHSPCMIPPPVNRVFPISHVSCD 411
           H    +D S+MFYG   +NG+QH +PV ++D+G             PV+    I+H   D
Sbjct: 54  HLPEHYDGSAMFYGIGQYNGVQHHHPVPSLDIGF------------PVS----INHGPSD 97

Query: 412 QLPYSSHHGIAAVGISDFGGNHQFMDGVRNSGKRKNAEGVPGSYLHVNXXXXXXXXXLCI 591
           QLP SS+HG+  V   ++G  + FMDGVR + KRKNAEG+ G++ ++N            
Sbjct: 98  QLPSSSNHGVIGVSTDEYGRENHFMDGVRGACKRKNAEGILGNFQYIN------------ 145

Query: 592 PPPSVGILQSEGQLESGAAVLEATASVPPEYGVNGVSLIXXXXXXXXXXXXXLQVESPML 771
                G+  S     S   V  +  SV    G  G                   ++S + 
Sbjct: 146 -----GLASSRNNAPSIMEV-GSHRSVRNRSGAVG-------------------LDSVLA 180

Query: 772 LNPNHLAQGNYINQSFQPAA--WVEQQFGXXXXXXXXXXWNYTP---------------- 897
            N NHL QGNYI   FQP+   WV+QQ G          WN+ P                
Sbjct: 181 HNHNHLVQGNYIGHPFQPSGNPWVDQQSGNNGSDGGTLAWNHGPALPYLHGILSSHIFVS 240

Query: 898 -MHYLNG--------RNVNGVSSEIASMGGQGYADAMNSR 990
              +LNG         N++G S E  ++G QGY D  + R
Sbjct: 241 HFRFLNGSHLMTKSRSNISGGSREAGNVGIQGYHDTSSGR 280