BLASTX nr result

ID: Coptis24_contig00013332 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013332
         (578 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258...   117   1e-24
ref|XP_003529421.1| PREDICTED: uncharacterized protein LOC100790...   111   8e-23
ref|XP_003531780.1| PREDICTED: uncharacterized protein LOC100777...   110   2e-22
gb|ABK95143.1| unknown [Populus trichocarpa]                          107   1e-21
emb|CAN63743.1| hypothetical protein VITISV_041630 [Vitis vinifera]   105   4e-21

>ref|XP_002266002.1| PREDICTED: uncharacterized protein LOC100258138 [Vitis vinifera]
           gi|297735765|emb|CBI18452.3| unnamed protein product
           [Vitis vinifera]
          Length = 418

 Score =  117 bits (293), Expect = 1e-24
 Identities = 77/194 (39%), Positives = 105/194 (54%), Gaps = 4/194 (2%)
 Frame = -3

Query: 573 KIVCSTSGE-NRGFGPGXXXXXXXXXXXXXXE-GTSLEPQKGQPTSKSTETRPSQAPGLI 400
           +I CS+  +  RGFGP               + G     Q+ + TSK + + P+QAPGL 
Sbjct: 31  RIHCSSDSKPTRGFGPQPPQRDNKMSKSTTSKEGKGGVLQQRKSTSKQSGSVPTQAPGLS 90

Query: 399 SQSDGNFSSIGSNNQFEEKLQAVRRAALEQRKIKESNQFGTIDYDAPIVSEQNXXXXXXX 220
           S+S G  +    +  FEE+L+AVRR ALEQ+K  E  ++G IDYD P+ SE+        
Sbjct: 91  SRSGGKSNDAAIDLDFEERLEAVRRTALEQKKADEKKEYGAIDYDTPVESEEKTIGLGTK 150

Query: 219 XXXXXXXXXXXXXXXXXXXLP--STSSTDDATVVENKLTKEDKLVLKSRLQQYEKELSLS 46
                              LP  S S +++ATVV  KL++E+K  L++RLQQYE  LS S
Sbjct: 151 IGVGVAVVVFGLVFALGDFLPSGSDSPSEEATVVSKKLSEEEKSTLQARLQQYEATLSSS 210

Query: 45  PEDPAALEAAAVTL 4
           P+D  ALEAAAVTL
Sbjct: 211 PKDQTALEAAAVTL 224


>ref|XP_003529421.1| PREDICTED: uncharacterized protein LOC100790462 [Glycine max]
          Length = 389

 Score =  111 bits (278), Expect = 8e-23
 Identities = 75/193 (38%), Positives = 100/193 (51%), Gaps = 2/193 (1%)
 Frame = -3

Query: 573 KIVCSTSGENRGFGPGXXXXXXXXXXXXXXEGTSLEPQKGQPTSKSTETRPSQAPGLISQ 394
           +I CS S + RGFG                 G   +  KG   +K +    SQAP L SQ
Sbjct: 20  QINCSDSKQGRGFGENTNSNRIKTNKSDK--GLVSQQSKGS-ANKQSRPLSSQAPRLSSQ 76

Query: 393 SDGNFSSIGSNNQFEEKLQAVRRAALEQRKIKESNQFGTIDYDAPIVSEQNXXXXXXXXX 214
            DG   +   +  FEE+L+AVRR+ALEQ+K +E  +FG IDYDAPI S+           
Sbjct: 77  LDGKSRNDFLDVDFEERLKAVRRSALEQKKAEEEKEFGAIDYDAPIPSDNTTIGVGTKIG 136

Query: 213 XXXXXXXXXXXXXXXXXLP--STSSTDDATVVENKLTKEDKLVLKSRLQQYEKELSLSPE 40
                            LP  S S T+D+ VV +KL++EDK  L+SRL+++E  LS S  
Sbjct: 137 VGVAVAVFGLVFAFGDFLPSGSVSPTEDSAVVNSKLSEEDKATLQSRLKEFEATLSNSSR 196

Query: 39  DPAALEAAAVTLS 1
           DP ALE AA+TL+
Sbjct: 197 DPTALEGAAITLA 209


>ref|XP_003531780.1| PREDICTED: uncharacterized protein LOC100777868 [Glycine max]
          Length = 393

 Score =  110 bits (275), Expect = 2e-22
 Identities = 75/195 (38%), Positives = 101/195 (51%), Gaps = 4/195 (2%)
 Frame = -3

Query: 573 KIVCSTSGENRGFGPGXXXXXXXXXXXXXXEGTSLEPQKGQPTSKSTETRP--SQAPGLI 400
           +I CS S + RGFG                    ++  K    S + ++RP  SQAP L 
Sbjct: 21  QINCSDSKQGRGFGENTNSNSN---------SNRIKTNKSDKGSTTKQSRPLSSQAPRLS 71

Query: 399 SQSDGNFSSIGSNNQFEEKLQAVRRAALEQRKIKESNQFGTIDYDAPIVSEQNXXXXXXX 220
           SQ DG   +   +  FEE+L+AVRR+ALEQ+K +E  +FG IDY API S+         
Sbjct: 72  SQLDGKSRNDFLDVDFEERLKAVRRSALEQKKAEEEKEFGAIDYGAPIPSDNKTIGLGTK 131

Query: 219 XXXXXXXXXXXXXXXXXXXLP--STSSTDDATVVENKLTKEDKLVLKSRLQQYEKELSLS 46
                              LP  S S T+D+ VV +KL++EDK  L+SRL+++E  LS S
Sbjct: 132 IGVGVAVAVFGLVFAFGDFLPSGSVSPTEDSAVVNSKLSEEDKATLQSRLKEFEATLSNS 191

Query: 45  PEDPAALEAAAVTLS 1
           P D  ALE AAVTL+
Sbjct: 192 PRDQIALEGAAVTLA 206


>gb|ABK95143.1| unknown [Populus trichocarpa]
          Length = 405

 Score =  107 bits (267), Expect = 1e-21
 Identities = 65/162 (40%), Positives = 93/162 (57%), Gaps = 3/162 (1%)
 Frame = -3

Query: 477 TSLEPQKGQPTS-KSTETRPSQAPGLISQSDGNFSSIGSNNQFEEKLQAVRRAALEQRKI 301
           +S   +KG     + + T+ S+APGL S+ DG  S   ++  FEE+LQAVRR+ALEQ+K 
Sbjct: 51  SSSREEKGMALQQRKSTTKQSEAPGLSSRFDGKSSRNSADTDFEERLQAVRRSALEQKKT 110

Query: 300 KESNQFGTIDYDAPIVSEQNXXXXXXXXXXXXXXXXXXXXXXXXXXLPSTSS--TDDATV 127
           +   +FG IDYD P+ +E                            LPS S   T++ATV
Sbjct: 111 EAIKEFGPIDYDEPVKTENKTIGLGTKIGVGVAVLVFGLVFALGDFLPSGSDGPTEEATV 170

Query: 126 VENKLTKEDKLVLKSRLQQYEKELSLSPEDPAALEAAAVTLS 1
           V  KL++E++  L++RL+QYE  LS +P+D  ALE AAVTL+
Sbjct: 171 VNKKLSEEEQNTLRARLKQYELTLSTAPKDSIALEGAAVTLA 212


>emb|CAN63743.1| hypothetical protein VITISV_041630 [Vitis vinifera]
          Length = 410

 Score =  105 bits (263), Expect = 4e-21
 Identities = 62/139 (44%), Positives = 81/139 (58%), Gaps = 2/139 (1%)
 Frame = -3

Query: 414 APGLISQSDGNFSSIGSNNQFEEKLQAVRRAALEQRKIKESNQFGTIDYDAPIVSEQNXX 235
           APGL S+S G  +    +  FEE+L+AVRR ALEQ+K  E  ++G IDYD P+ SE+   
Sbjct: 78  APGLSSRSGGKSNDAAIDLDFEERLEAVRRTALEQKKADEKKEYGAIDYDTPVESEEKTI 137

Query: 234 XXXXXXXXXXXXXXXXXXXXXXXXLP--STSSTDDATVVENKLTKEDKLVLKSRLQQYEK 61
                                   LP  S S +++ATVV  KL++E+K  L++RLQQYE 
Sbjct: 138 GLGTKIGVGVAVVVFGLVFALGDFLPSGSDSPSEEATVVSKKLSEEEKATLQARLQQYEA 197

Query: 60  ELSLSPEDPAALEAAAVTL 4
            LS SP+D  ALEAAAVTL
Sbjct: 198 TLSSSPKDQTALEAAAVTL 216


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