BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013311
         (1640 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aesti...   514   e-143
gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avel...   500   e-139
gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aesti...   495   e-137
ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synt...   486   e-135
gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humul...   484   e-134

>gb|AAV74395.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
            palaestina]
          Length = 364

 Score =  514 bits (1324), Expect = e-143
 Identities = 270/380 (71%), Positives = 310/380 (81%), Gaps = 1/380 (0%)
 Frame = +2

Query: 170  MSSATAS-LHLSTWVQSCSKFNNHAGGRSVYSSTSLILKNIPNTPKKRRPMVSYTGPISA 346
            M++ T+S LH  +W      +N+         ST  I  N P +PK  +P+ S+  PIS+
Sbjct: 1    MATITSSPLHFFSW-----SYNHGTLTPRSIPSTCFIFHNKPVSPKSTKPL-SFKTPISS 54

Query: 347  VHLTKGGEKVKEESNNNNTNTQGEMTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAM 526
            V+LT          N  N     EMTFDF +Y+L KG SVNQALD+A+ I+EPEKIHEAM
Sbjct: 55   VYLT----------NTENKGKDKEMTFDFKAYLLEKGKSVNQALDNAILIREPEKIHEAM 104

Query: 527  RYSLLAGGKRVRPILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRR 706
            RYSLLAGGKRVRPILCIAA ELVGGNES+AMP+ACAVEMIHTMSLIHDDLPCMDNDDLRR
Sbjct: 105  RYSLLAGGKRVRPILCIAASELVGGNESMAMPSACAVEMIHTMSLIHDDLPCMDNDDLRR 164

Query: 707  GMPTNHKVFGENVAVLAGDALLAFAFEHMANATVGATPSRIIQAIGELAKDIGSEGLVAG 886
            G PTNHKV+GENVAVLAGDALLAFAFE++ANATVG +PSR+++AIGELAKDIGSEGLVAG
Sbjct: 165  GKPTNHKVYGENVAVLAGDALLAFAFEYVANATVGVSPSRVVRAIGELAKDIGSEGLVAG 224

Query: 887  QVVDIQSAGVSDVGLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGL 1066
            QVVDI SAG+S++GL+HLE+IH+HKTAALLE SVVIGAILGGG+++QV +LRKFARCIGL
Sbjct: 225  QVVDILSAGMSNIGLDHLEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGL 284

Query: 1067 LFQVVDDILDVTKSSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEF 1246
            LFQVVDDILDVT SS+ELGKTAGKDLVADKATYPKLLGLEKAREFAEKL  +A +QL EF
Sbjct: 285  LFQVVDDILDVTMSSEELGKTAGKDLVADKATYPKLLGLEKAREFAEKLKNEAIEQLDEF 344

Query: 1247 DPEKXXXXXXXXEYIAHRQN 1306
            DPE+        EYIAHRQN
Sbjct: 345  DPEEAAPLLALAEYIAHRQN 364


>gb|ABW06960.1| geranylgeranyl diphosphate synthase [Corylus avellana]
          Length = 373

 Score =  500 bits (1287), Expect = e-139
 Identities = 267/378 (70%), Positives = 308/378 (81%), Gaps = 6/378 (1%)
 Frame = +2

Query: 191  LHLSTWVQSCSKFNNHAGGRSVYSSTSLIL---KNIPNT---PKKRRPMVSYTGPISAVH 352
            ++LSTWVQ+CS FN     RS+ + +  IL   KNIP +   PK+RR + S +  +SAV 
Sbjct: 4    VNLSTWVQTCSMFNQAGRSRSMSTPSFQILHPLKNIPISFIPPKRRRSISSVS--VSAV- 60

Query: 353  LTKGGEKVKEESNNNNTNTQGEMTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMRY 532
            LTK     +EE + +   T     F+F +Y+L K NSVNQALD AVS+K+P KIHEAMRY
Sbjct: 61   LTKEDTLREEEESESEART-----FNFKTYMLQKANSVNQALDAAVSLKDPRKIHEAMRY 115

Query: 533  SLLAGGKRVRPILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGM 712
            SLLAGGKRVRP+LCIAACELVGG ESIAMPAAC+VEMIHTMSLIHDDLPCMDNDDLRRG 
Sbjct: 116  SLLAGGKRVRPMLCIAACELVGGTESIAMPAACSVEMIHTMSLIHDDLPCMDNDDLRRGK 175

Query: 713  PTNHKVFGENVAVLAGDALLAFAFEHMANATVGATPSRIIQAIGELAKDIGSEGLVAGQV 892
            PTNHKVFGE+VAVLAGDALLAF+FEH+A +T G  P+RI++AIGELA+ IG+EGLVAGQV
Sbjct: 176  PTNHKVFGEDVAVLAGDALLAFSFEHIAVSTEGVPPARILRAIGELARSIGAEGLVAGQV 235

Query: 893  VDIQSAGVSDVGLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLLF 1072
            VDI S G+SDVGLEHLE+IH+HKTAALLEG+VV+GAILGGGS ++V KLR FAR IGLLF
Sbjct: 236  VDICSEGLSDVGLEHLEFIHLHKTAALLEGAVVLGAILGGGSNEEVEKLRNFARYIGLLF 295

Query: 1073 QVVDDILDVTKSSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFDP 1252
            QVVDDILDVTKSS+ELGKTAGKDLVADK TYPKL+G+EK+REFAEKL KDA DQLA FD 
Sbjct: 296  QVVDDILDVTKSSQELGKTAGKDLVADKVTYPKLMGVEKSREFAEKLNKDAQDQLAGFDA 355

Query: 1253 EKXXXXXXXXEYIAHRQN 1306
            EK         YIAHRQN
Sbjct: 356  EKAAPLIALANYIAHRQN 373


>gb|AAV74396.1| geranylgeranyl diphosphate synthase [Adonis aestivalis var.
            palaestina]
          Length = 310

 Score =  495 bits (1275), Expect = e-137
 Identities = 248/307 (80%), Positives = 276/307 (89%)
 Frame = +2

Query: 386  SNNNNTNTQGEMTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMRYSLLAGGKRVRP 565
            +N  N      M FDF +Y+L KG SVNQALD+AV I+EPEKIHEAMRYSLLAGGKRVRP
Sbjct: 4    TNTENKPEDKTMDFDFKAYLLEKGKSVNQALDNAVLIREPEKIHEAMRYSLLAGGKRVRP 63

Query: 566  ILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGMPTNHKVFGENV 745
            ILCIAACELVGGNES+AMP+ACAVEMIHTMSL+HDDLPCMDNDDLRRG PTNHKV+GENV
Sbjct: 64   ILCIAACELVGGNESMAMPSACAVEMIHTMSLMHDDLPCMDNDDLRRGKPTNHKVYGENV 123

Query: 746  AVLAGDALLAFAFEHMANATVGATPSRIIQAIGELAKDIGSEGLVAGQVVDIQSAGVSDV 925
            AVLAGDALLAFAFE++ANATVG +PSR+I+AIGELAKDIGSEGLVAGQVVDI SAG+S++
Sbjct: 124  AVLAGDALLAFAFEYVANATVGVSPSRVIRAIGELAKDIGSEGLVAGQVVDILSAGMSNI 183

Query: 926  GLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLLFQVVDDILDVTK 1105
            GL+HLE+IH+HKTAALLE SVVIGAILGGG+++QV +LRKFARCIGLLFQVVDDILDVT 
Sbjct: 184  GLDHLEFIHLHKTAALLEASVVIGAILGGGTDEQVERLRKFARCIGLLFQVVDDILDVTM 243

Query: 1106 SSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFDPEKXXXXXXXXE 1285
            SS+ELGKTAGKDLVADKATYPKLLGLEKAREFAEKL  +A +QL EFDPEK        E
Sbjct: 244  SSEELGKTAGKDLVADKATYPKLLGLEKAREFAEKLKNEATEQLDEFDPEKAAPLLALAE 303

Query: 1286 YIAHRQN 1306
            +IAHRQN
Sbjct: 304  FIAHRQN 310


>ref|XP_002273789.1| PREDICTED: geranylgeranyl pyrophosphate synthase, chloroplastic
            [Vitis vinifera]
          Length = 368

 Score =  486 bits (1252), Expect = e-135
 Identities = 254/379 (67%), Positives = 298/379 (78%), Gaps = 6/379 (1%)
 Frame = +2

Query: 188  SLHLSTWVQSCSKFNNHAGGRSVYSSTSLILKNIPN------TPKKRRPMVSYTGPISAV 349
            +++L TWV +   FN+  GGR      S +L  + N      + +  RPM S    ++  
Sbjct: 3    TVNLGTWVHTSYVFNH--GGRLKSPVLSRMLHPLKNPSFPMLSQRSGRPM-SLVAVLTKE 59

Query: 350  HLTKGGEKVKEESNNNNTNTQGEMTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMR 529
             + +GG+  +EE          +  F+F +YIL K NSVN+ALDDAV I+EP K+HE+MR
Sbjct: 60   EMVRGGDTPEEE----------KPAFNFNAYILDKANSVNKALDDAVPIREPVKVHESMR 109

Query: 530  YSLLAGGKRVRPILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRG 709
            YSLLAGGKRVRP+LCIAACELVGG+E+ AMPAACAVEMIHTMSL+HDDLPCMDNDDLRRG
Sbjct: 110  YSLLAGGKRVRPVLCIAACELVGGDEATAMPAACAVEMIHTMSLMHDDLPCMDNDDLRRG 169

Query: 710  MPTNHKVFGENVAVLAGDALLAFAFEHMANATVGATPSRIIQAIGELAKDIGSEGLVAGQ 889
             PTNHKVFGENVA+LAGDALLAFAFEHMA ATVG  P  I++A+GELAK IGSEGLVAGQ
Sbjct: 170  KPTNHKVFGENVAILAGDALLAFAFEHMATATVGVPPGWIVRAVGELAKSIGSEGLVAGQ 229

Query: 890  VVDIQSAGVSDVGLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLL 1069
            VVDI S G+ DVGLEHLEYIH+HKTAALLEG+VV+GAILGGGS +++ KLRKFARCIGLL
Sbjct: 230  VVDICSEGLKDVGLEHLEYIHVHKTAALLEGAVVLGAILGGGSNEEIEKLRKFARCIGLL 289

Query: 1070 FQVVDDILDVTKSSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFD 1249
            FQVVDDILDVTKSS+ELGKTAGKDLVADK TYPKLLG+EK+RE AE+L KDA DQL+ FD
Sbjct: 290  FQVVDDILDVTKSSQELGKTAGKDLVADKLTYPKLLGIEKSRELAEQLNKDAKDQLSGFD 349

Query: 1250 PEKXXXXXXXXEYIAHRQN 1306
            P+K         YIA+RQN
Sbjct: 350  PDKAAPLIALSNYIAYRQN 368


>gb|ACQ90682.1| geranyl diphosphate synthase large subunit [Humulus lupulus]
          Length = 369

 Score =  484 bits (1246), Expect = e-134
 Identities = 255/375 (68%), Positives = 304/375 (81%), Gaps = 7/375 (1%)
 Frame = +2

Query: 203  TWVQSCSKFNNHAGGRSVYSSTSLI----LKNIP---NTPKKRRPMVSYTGPISAVHLTK 361
            TWVQ+CS FN    GRS  S+ +L+    LK +P    TPK+RRP  S++  ISAV LT+
Sbjct: 7    TWVQTCSMFNQ--AGRSRSSTFNLLHYHPLKKVPFSFQTPKQRRPTSSFSS-ISAV-LTE 62

Query: 362  GGEKVKEESNNNNTNTQGEMTFDFMSYILAKGNSVNQALDDAVSIKEPEKIHEAMRYSLL 541
                 ++E   +        TF+F SY++ K NSVNQALD AV ++EP+ IHEAMRYSLL
Sbjct: 63   QEAVTEDEEQKS--------TFNFKSYMVQKANSVNQALDAAVLLREPQMIHEAMRYSLL 114

Query: 542  AGGKRVRPILCIAACELVGGNESIAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGMPTN 721
            AGGKRVRP+LC++ACELVGG+ES+AMPAACAVEMIHTMSLIHDDLPCMDNDDLRRG PTN
Sbjct: 115  AGGKRVRPVLCLSACELVGGDESVAMPAACAVEMIHTMSLIHDDLPCMDNDDLRRGKPTN 174

Query: 722  HKVFGENVAVLAGDALLAFAFEHMANATVGATPSRIIQAIGELAKDIGSEGLVAGQVVDI 901
            HKVFGE+VAVLAGDALLA+AFEH+A +TVG   +RII+AIGELAK IGSEGLVAGQVVDI
Sbjct: 175  HKVFGEDVAVLAGDALLAYAFEHVAVSTVGVPAARIIRAIGELAKSIGSEGLVAGQVVDI 234

Query: 902  QSAGVSDVGLEHLEYIHIHKTAALLEGSVVIGAILGGGSEDQVAKLRKFARCIGLLFQVV 1081
             S G+++VGLE LE+IH+HKTAALLE SVV+GAILGGG+++QV +LR FARCIGLLFQ V
Sbjct: 235  DSEGLANVGLEQLEFIHLHKTAALLEASVVLGAILGGGTDEQVEELRSFARCIGLLFQAV 294

Query: 1082 DDILDVTKSSKELGKTAGKDLVADKATYPKLLGLEKAREFAEKLYKDANDQLAEFDPEKX 1261
            DDILDVTKSS+ELGKTAGKDLVADKATYP+L+G+EK+REFAEKL ++A + L  FDP+K 
Sbjct: 295  DDILDVTKSSQELGKTAGKDLVADKATYPRLMGIEKSREFAEKLNREAQEHLGGFDPQKA 354

Query: 1262 XXXXXXXEYIAHRQN 1306
                    YIA+RQN
Sbjct: 355  APLIALANYIAYRQN 369