BLASTX nr result
ID: Coptis24_contig00013309
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013309
(1763 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002300700.1| predicted protein [Populus trichocarpa] gi|2... 465 e-128
ref|XP_002889045.1| hypothetical protein ARALYDRAFT_476726 [Arab... 441 e-121
gb|AAF87105.1|AC006434_1 F10A5.2 [Arabidopsis thaliana] 438 e-120
gb|AAF26773.2|AC007396_22 T4O12.2 [Arabidopsis thaliana] 438 e-120
ref|NP_177707.1| SKU5 similar 18 protein [Arabidopsis thaliana] ... 438 e-120
>ref|XP_002300700.1| predicted protein [Populus trichocarpa] gi|222842426|gb|EEE79973.1|
predicted protein [Populus trichocarpa]
Length = 546
Score = 465 bits (1196), Expect = e-128
Identities = 244/428 (57%), Positives = 296/428 (69%), Gaps = 4/428 (0%)
Frame = +2
Query: 2 KAAGGYGAXXXXXXXXXXXXFSTPYKEFDILIGDWFISDYQDMRSSLDRGIPLPSQPDGI 181
KAAGGYG F P+ + D+LIGDW+ +D++D+R+ LD G L + P GI
Sbjct: 128 KAAGGYGPIRVNNREVIPIPFPQPHGDIDVLIGDWYSADHRDLRALLDNGTGLQN-PSGI 186
Query: 182 LINGLGPYLANFDFRPGATYRLRISNLGLKTSLNFRIQNHLMLLVESEGSYTLQQYYRTL 361
LING GP F+F+PGATYRLRISN+GLKTSLNFRIQ+HLMLLVE+EGSYT QQ Y L
Sbjct: 187 LINGRGPNETVFEFQPGATYRLRISNVGLKTSLNFRIQDHLMLLVETEGSYTAQQTYSNL 246
Query: 362 DIHVGQSYSVLVTA-NQTDAMSFFMVASSRFLDPGVMGIAIIQYSGSQANPTGPLPIGPA 538
DIHVGQSYSVLVTA NQT S++MVASSR D + G+ +I+Y S P+GPLP GP
Sbjct: 247 DIHVGQSYSVLVTAKNQTSGKSYYMVASSRLTDAELFGVGVIRYPNSDDFPSGPLPPGPQ 306
Query: 539 PLDYIYSMEQARSIRWNLAVGAARPNPQGSFHYGLINISRTMVLLNDVAVIDDHQRYTVN 718
DY YS+EQARSIRWNL+ GAARPNPQGS+HYG IN+SRT+VL N I+ H YTVN
Sbjct: 307 LHDYFYSIEQARSIRWNLSAGAARPNPQGSYHYGSINVSRTIVLRNGETDINRH-LYTVN 365
Query: 719 GISFVNLDTPLKLADYFKVDKVLGVDAFPDKPDSRS-PALGTSVIDASYRDFIHVVFQNT 895
G+SFV+ TPLK+ADYF+++ L FPD P L TSVI+A+YR+F H+VF+N
Sbjct: 366 GVSFVSQGTPLKMADYFELE-TLKTGIFPDTPIGNGISTLDTSVINANYREFYHLVFENP 424
Query: 896 QLTLQTWHLDGYNFFVVGMNSG--KWDETKKSTYNMYDAISRSTVQVCGNI*ILRLSMFK 1069
+LQTWHLDGYNFFVVGM G W+E K+TYN+ DA+SRSTV
Sbjct: 425 TPSLQTWHLDGYNFFVVGMEFGTSSWEEDMKATYNLNDAVSRSTV--------------- 469
Query: 1070 HMPYARGDPNYTVSLFEQVYPNSWTATLIKLDNRGMWNIRSQDSERWYLGQELYMRVKAI 1249
QVYP WTA ++ LDN+G+WN+RSQD ERWYLGQELY+RV+ I
Sbjct: 470 -----------------QVYPFGWTAVMVMLDNQGLWNLRSQDVERWYLGQELYLRVRGI 512
Query: 1250 GEDDPSMI 1273
GE+DPS I
Sbjct: 513 GEEDPSTI 520
>ref|XP_002889045.1| hypothetical protein ARALYDRAFT_476726 [Arabidopsis lyrata subsp.
lyrata] gi|297334886|gb|EFH65304.1| hypothetical protein
ARALYDRAFT_476726 [Arabidopsis lyrata subsp. lyrata]
Length = 545
Score = 441 bits (1135), Expect = e-121
Identities = 228/430 (53%), Positives = 294/430 (68%), Gaps = 4/430 (0%)
Frame = +2
Query: 2 KAAGGYGAXXXXXXXXXXXXFSTPYKEFDILIGDWFISDYQDMRSSLDRGIPLPSQPDGI 181
KAAGGYGA F P +E+DILIGDWF +D+ MR+SLD G LP +PDGI
Sbjct: 133 KAAGGYGAIRIYTPELVPVPFPKPDEEYDILIGDWFYADHTVMRASLDTGHSLP-KPDGI 191
Query: 182 LINGLGPYLANFDFRPGATYRLRISNLGLKTSLNFRIQNHLMLLVESEGSYTLQQYYRTL 361
L NG GP F F PG TYRLRISN+GLKT LNFRIQ+H MLLVE+EG+Y ++ Y +L
Sbjct: 192 LFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSL 251
Query: 362 DIHVGQSYSVLVTANQTDAM----SFFMVASSRFLDPGVMGIAIIQYSGSQANPTGPLPI 529
DIHVGQSYSVLVTA +TD + S+++ A++RF D + G A+I+Y S +P GP+P+
Sbjct: 252 DIHVGQSYSVLVTA-KTDPVGIYRSYYIYATARFTDFYLGGRALIRYPNSPLDPVGPVPL 310
Query: 530 GPAPLDYIYSMEQARSIRWNLAVGAARPNPQGSFHYGLINISRTMVLLNDVAVIDDHQRY 709
PA DY S+EQA SIR +L VGAAR NPQGS+HYG IN++RT++L NDV + RY
Sbjct: 311 APASWDYSSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRY 370
Query: 710 TVNGISFVNLDTPLKLADYFKVDKVLGVDAFPDKPDSRSPALGTSVIDASYRDFIHVVFQ 889
T+NG+SFV DTPLKL D+F+++ + D FP P +++P+LGTSV+D Y+DF+H+VFQ
Sbjct: 371 TINGVSFVYPDTPLKLVDHFQLNDTIIPDMFPVYPSNKTPSLGTSVVDIHYKDFVHIVFQ 430
Query: 890 NTQLTLQTWHLDGYNFFVVGMNSGKWDETKKSTYNMYDAISRSTVQVCGNI*ILRLSMFK 1069
N L+++H+DGYNFFVVG G W E+K++ YN+ DA+SRST+
Sbjct: 431 NPLFELESYHIDGYNFFVVGYGFGAWSESKRAGYNLVDAVSRSTI--------------- 475
Query: 1070 HMPYARGDPNYTVSLFEQVYPNSWTATLIKLDNRGMWNIRSQDSERWYLGQELYMRVKAI 1249
QVYP SW A LI +DN+GMWN+RSQ +E+WYLGQELYMRVK
Sbjct: 476 -----------------QVYPYSWAAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGE 518
Query: 1250 GEDDPSMISV 1279
G++DPS I V
Sbjct: 519 GQEDPSNIPV 528
>gb|AAF87105.1|AC006434_1 F10A5.2 [Arabidopsis thaliana]
Length = 498
Score = 438 bits (1127), Expect = e-120
Identities = 230/430 (53%), Positives = 292/430 (67%), Gaps = 4/430 (0%)
Frame = +2
Query: 2 KAAGGYGAXXXXXXXXXXXXFSTPYKEFDILIGDWFISDYQDMRSSLDRGIPLPSQPDGI 181
KAAGGYGA F P +E+DILIGDWF D+ MR+SLD G LP+ PDGI
Sbjct: 86 KAAGGYGAIRIYPPELVPVPFPKPDEEYDILIGDWFYLDHTVMRASLDAGHSLPN-PDGI 144
Query: 182 LINGLGPYLANFDFRPGATYRLRISNLGLKTSLNFRIQNHLMLLVESEGSYTLQQYYRTL 361
L NG GP F F PG TYRLRISN+GLKT LNFRIQ+H MLLVE+EG+Y ++ Y +L
Sbjct: 145 LFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSL 204
Query: 362 DIHVGQSYSVLVTANQTDAM----SFFMVASSRFLDPGVMGIAIIQYSGSQANPTGPLPI 529
DIHVGQSYS+LVTA +TD + S+++ A++RF D + GIA+I+Y GS +P G P+
Sbjct: 205 DIHVGQSYSILVTA-KTDPVGIYRSYYIFATARFTDSYLGGIALIRYPGSPLDPVGQGPL 263
Query: 530 GPAPLDYIYSMEQARSIRWNLAVGAARPNPQGSFHYGLINISRTMVLLNDVAVIDDHQRY 709
PA D+ S+EQA SIR +L VGAAR NPQGS+HYG IN++RT++L NDV + RY
Sbjct: 264 APALQDFGSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRY 323
Query: 710 TVNGISFVNLDTPLKLADYFKVDKVLGVDAFPDKPDSRSPALGTSVIDASYRDFIHVVFQ 889
T+NG+SFV +TPLKL D+F+++ + FP P +++P LGTSV+D Y+DFIH+VFQ
Sbjct: 324 TINGVSFVYPETPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFIHIVFQ 383
Query: 890 NTQLTLQTWHLDGYNFFVVGMNSGKWDETKKSTYNMYDAISRSTVQVCGNI*ILRLSMFK 1069
N L+++H+DGYNFFVVG G W E+KK+ YN+ DA+SRSTV
Sbjct: 384 NPLFGLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTV--------------- 428
Query: 1070 HMPYARGDPNYTVSLFEQVYPNSWTATLIKLDNRGMWNIRSQDSERWYLGQELYMRVKAI 1249
QVYP SWTA LI +DN+GMWN+RSQ +E+WYLGQELYMRVK
Sbjct: 429 -----------------QVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGE 471
Query: 1250 GEDDPSMISV 1279
GE+DPS I V
Sbjct: 472 GEEDPSTIPV 481
>gb|AAF26773.2|AC007396_22 T4O12.2 [Arabidopsis thaliana]
Length = 511
Score = 438 bits (1127), Expect = e-120
Identities = 230/430 (53%), Positives = 292/430 (67%), Gaps = 4/430 (0%)
Frame = +2
Query: 2 KAAGGYGAXXXXXXXXXXXXFSTPYKEFDILIGDWFISDYQDMRSSLDRGIPLPSQPDGI 181
KAAGGYGA F P +E+DILIGDWF D+ MR+SLD G LP+ PDGI
Sbjct: 99 KAAGGYGAIRIYPPELVPVPFPKPDEEYDILIGDWFYLDHTVMRASLDAGHSLPN-PDGI 157
Query: 182 LINGLGPYLANFDFRPGATYRLRISNLGLKTSLNFRIQNHLMLLVESEGSYTLQQYYRTL 361
L NG GP F F PG TYRLRISN+GLKT LNFRIQ+H MLLVE+EG+Y ++ Y +L
Sbjct: 158 LFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSL 217
Query: 362 DIHVGQSYSVLVTANQTDAM----SFFMVASSRFLDPGVMGIAIIQYSGSQANPTGPLPI 529
DIHVGQSYS+LVTA +TD + S+++ A++RF D + GIA+I+Y GS +P G P+
Sbjct: 218 DIHVGQSYSILVTA-KTDPVGIYRSYYIFATARFTDSYLGGIALIRYPGSPLDPVGQGPL 276
Query: 530 GPAPLDYIYSMEQARSIRWNLAVGAARPNPQGSFHYGLINISRTMVLLNDVAVIDDHQRY 709
PA D+ S+EQA SIR +L VGAAR NPQGS+HYG IN++RT++L NDV + RY
Sbjct: 277 APALQDFGSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRY 336
Query: 710 TVNGISFVNLDTPLKLADYFKVDKVLGVDAFPDKPDSRSPALGTSVIDASYRDFIHVVFQ 889
T+NG+SFV +TPLKL D+F+++ + FP P +++P LGTSV+D Y+DFIH+VFQ
Sbjct: 337 TINGVSFVYPETPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFIHIVFQ 396
Query: 890 NTQLTLQTWHLDGYNFFVVGMNSGKWDETKKSTYNMYDAISRSTVQVCGNI*ILRLSMFK 1069
N L+++H+DGYNFFVVG G W E+KK+ YN+ DA+SRSTV
Sbjct: 397 NPLFGLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTV--------------- 441
Query: 1070 HMPYARGDPNYTVSLFEQVYPNSWTATLIKLDNRGMWNIRSQDSERWYLGQELYMRVKAI 1249
QVYP SWTA LI +DN+GMWN+RSQ +E+WYLGQELYMRVK
Sbjct: 442 -----------------QVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGE 484
Query: 1250 GEDDPSMISV 1279
GE+DPS I V
Sbjct: 485 GEEDPSTIPV 494
>ref|NP_177707.1| SKU5 similar 18 protein [Arabidopsis thaliana]
gi|91806095|gb|ABE65776.1| multi-copper oxidase type I
family protein [Arabidopsis thaliana]
gi|332197638|gb|AEE35759.1| SKU5 similar 18 protein
[Arabidopsis thaliana]
Length = 545
Score = 438 bits (1127), Expect = e-120
Identities = 230/430 (53%), Positives = 292/430 (67%), Gaps = 4/430 (0%)
Frame = +2
Query: 2 KAAGGYGAXXXXXXXXXXXXFSTPYKEFDILIGDWFISDYQDMRSSLDRGIPLPSQPDGI 181
KAAGGYGA F P +E+DILIGDWF D+ MR+SLD G LP+ PDGI
Sbjct: 133 KAAGGYGAIRIYPPELVPVPFPKPDEEYDILIGDWFYLDHTVMRASLDAGHSLPN-PDGI 191
Query: 182 LINGLGPYLANFDFRPGATYRLRISNLGLKTSLNFRIQNHLMLLVESEGSYTLQQYYRTL 361
L NG GP F F PG TYRLRISN+GLKT LNFRIQ+H MLLVE+EG+Y ++ Y +L
Sbjct: 192 LFNGRGPEETFFAFEPGKTYRLRISNVGLKTCLNFRIQDHDMLLVETEGTYVQKRVYSSL 251
Query: 362 DIHVGQSYSVLVTANQTDAM----SFFMVASSRFLDPGVMGIAIIQYSGSQANPTGPLPI 529
DIHVGQSYS+LVTA +TD + S+++ A++RF D + GIA+I+Y GS +P G P+
Sbjct: 252 DIHVGQSYSILVTA-KTDPVGIYRSYYIFATARFTDSYLGGIALIRYPGSPLDPVGQGPL 310
Query: 530 GPAPLDYIYSMEQARSIRWNLAVGAARPNPQGSFHYGLINISRTMVLLNDVAVIDDHQRY 709
PA D+ S+EQA SIR +L VGAAR NPQGS+HYG IN++RT++L NDV + RY
Sbjct: 311 APALQDFGSSVEQALSIRMDLNVGAARSNPQGSYHYGRINVTRTIILHNDVMLSSGKLRY 370
Query: 710 TVNGISFVNLDTPLKLADYFKVDKVLGVDAFPDKPDSRSPALGTSVIDASYRDFIHVVFQ 889
T+NG+SFV +TPLKL D+F+++ + FP P +++P LGTSV+D Y+DFIH+VFQ
Sbjct: 371 TINGVSFVYPETPLKLVDHFQLNDTIIPGMFPVYPSNKTPTLGTSVVDIHYKDFIHIVFQ 430
Query: 890 NTQLTLQTWHLDGYNFFVVGMNSGKWDETKKSTYNMYDAISRSTVQVCGNI*ILRLSMFK 1069
N L+++H+DGYNFFVVG G W E+KK+ YN+ DA+SRSTV
Sbjct: 431 NPLFGLESYHIDGYNFFVVGYGFGAWSESKKAGYNLVDAVSRSTV--------------- 475
Query: 1070 HMPYARGDPNYTVSLFEQVYPNSWTATLIKLDNRGMWNIRSQDSERWYLGQELYMRVKAI 1249
QVYP SWTA LI +DN+GMWN+RSQ +E+WYLGQELYMRVK
Sbjct: 476 -----------------QVYPYSWTAILIAMDNQGMWNVRSQKAEQWYLGQELYMRVKGE 518
Query: 1250 GEDDPSMISV 1279
GE+DPS I V
Sbjct: 519 GEEDPSTIPV 528