BLASTX nr result

ID: Coptis24_contig00013307 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013307
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003617067.1| T-complex protein 1 subunit eta [Medicago tr...   164   9e-39
ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-l...   162   2e-38
ref|XP_003519475.1| PREDICTED: T-complex protein 1 subunit eta-l...   162   2e-38
ref|XP_002528805.1| chaperonin containing t-complex protein 1, e...   162   2e-38
ref|XP_003545509.1| PREDICTED: T-complex protein 1 subunit eta-l...   162   3e-38

>ref|XP_003617067.1| T-complex protein 1 subunit eta [Medicago truncatula]
           gi|355518402|gb|AET00026.1| T-complex protein 1 subunit
           eta [Medicago truncatula]
          Length = 561

 Score =  164 bits (414), Expect = 9e-39
 Identities = 79/87 (90%), Positives = 85/87 (97%)
 Frame = +2

Query: 2   QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 181
           QPQIILLKEGTDTSQGKPQ++SNINACT +ADVVRTTLGPRGMDKLIHD+KG+ TISNDG
Sbjct: 6   QPQIILLKEGTDTSQGKPQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGSVTISNDG 65

Query: 182 ATIMKLLDVVHPAAKILVDIAKSQDSE 262
           ATIMKLLD+VHPAAKILVDIAKSQDSE
Sbjct: 66  ATIMKLLDIVHPAAKILVDIAKSQDSE 92


>ref|XP_004144081.1| PREDICTED: T-complex protein 1 subunit eta-like [Cucumis sativus]
           gi|449493528|ref|XP_004159333.1| PREDICTED: T-complex
           protein 1 subunit eta-like [Cucumis sativus]
          Length = 562

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/87 (90%), Positives = 84/87 (96%)
 Frame = +2

Query: 2   QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 181
           QPQIILLKEGTDTSQGK Q++SNINACT +ADVVRTTLGPRGMDKLIHD+KGN TISNDG
Sbjct: 6   QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVTISNDG 65

Query: 182 ATIMKLLDVVHPAAKILVDIAKSQDSE 262
           ATIMKLLD+VHPAAKILVDIAKSQDSE
Sbjct: 66  ATIMKLLDIVHPAAKILVDIAKSQDSE 92


>ref|XP_003519475.1| PREDICTED: T-complex protein 1 subunit eta-like [Glycine max]
          Length = 560

 Score =  162 bits (411), Expect = 2e-38
 Identities = 78/87 (89%), Positives = 84/87 (96%)
 Frame = +2

Query: 2   QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 181
           QPQIILLKEGTDTSQGKPQ++SNINACT +ADVVRTTLGPRGMDKLIHD+KG  TISNDG
Sbjct: 6   QPQIILLKEGTDTSQGKPQVVSNINACTAVADVVRTTLGPRGMDKLIHDDKGTVTISNDG 65

Query: 182 ATIMKLLDVVHPAAKILVDIAKSQDSE 262
           ATIMKLLD+VHPAA+ILVDIAKSQDSE
Sbjct: 66  ATIMKLLDIVHPAARILVDIAKSQDSE 92


>ref|XP_002528805.1| chaperonin containing t-complex protein 1, eta subunit, tcph,
           putative [Ricinus communis] gi|223531758|gb|EEF33578.1|
           chaperonin containing t-complex protein 1, eta subunit,
           tcph, putative [Ricinus communis]
          Length = 563

 Score =  162 bits (411), Expect = 2e-38
 Identities = 79/87 (90%), Positives = 84/87 (96%)
 Frame = +2

Query: 2   QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 181
           QPQIILLKEGTDTSQGK Q++SNINACT +ADVVRTTLGPRGMDKLIHD+KGN TISNDG
Sbjct: 6   QPQIILLKEGTDTSQGKAQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGNVTISNDG 65

Query: 182 ATIMKLLDVVHPAAKILVDIAKSQDSE 262
           ATIMKLLD+VHPAAKILVDIAKSQDSE
Sbjct: 66  ATIMKLLDIVHPAAKILVDIAKSQDSE 92


>ref|XP_003545509.1| PREDICTED: T-complex protein 1 subunit eta-like [Glycine max]
          Length = 560

 Score =  162 bits (409), Expect = 3e-38
 Identities = 78/87 (89%), Positives = 83/87 (95%)
 Frame = +2

Query: 2   QPQIILLKEGTDTSQGKPQIISNINACTGIADVVRTTLGPRGMDKLIHDEKGNATISNDG 181
           QPQIILLKEGTDTSQGKPQ++SNINACT +ADVVRTTLGPRGMDKLIHD+KG  TISNDG
Sbjct: 6   QPQIILLKEGTDTSQGKPQLVSNINACTAVADVVRTTLGPRGMDKLIHDDKGTVTISNDG 65

Query: 182 ATIMKLLDVVHPAAKILVDIAKSQDSE 262
           ATIMKLLD+VHPAAKIL DIAKSQDSE
Sbjct: 66  ATIMKLLDIVHPAAKILADIAKSQDSE 92


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