BLASTX nr result

ID: Coptis24_contig00013298 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013298
         (743 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261...   131   1e-28
ref|XP_002514089.1| conserved hypothetical protein [Ricinus comm...   131   1e-28
ref|XP_002309203.1| predicted protein [Populus trichocarpa] gi|2...   125   7e-27
emb|CBI35923.3| unnamed protein product [Vitis vinifera]              124   2e-26
ref|XP_002329058.1| predicted protein [Populus trichocarpa] gi|2...   120   3e-25

>ref|XP_002279061.1| PREDICTED: uncharacterized protein LOC100261010 [Vitis vinifera]
          Length = 555

 Score =  131 bits (330), Expect = 1e-28
 Identities = 74/164 (45%), Positives = 106/164 (64%), Gaps = 6/164 (3%)
 Frame = -1

Query: 704 PNRKNKTQPTMPQPTQEESPRPRKPTTP----VGRPPLPFKLNSFY--DENLNNGNQSPL 543
           P R +K +  +P P     P P  P T      G+PPLP + +SFY  D+N+N+G QSPL
Sbjct: 387 PPRSSKRKTHIP-PAPPTPPPPPPPDTSRRRAAGKPPLPARKSSFYNRDDNVNSGGQSPL 445

Query: 542 LHIXXXXXXXPFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTP 363
             I       PF+MP +K+VVRGD+VR++S+HSSR +SP+LD V+       S++ ++  
Sbjct: 446 --IPMPPPPPPFRMPELKYVVRGDFVRIRSTHSSRCSSPELDDVDL------SSNKSAMD 497

Query: 362 TGEAGVSVFCPSPDVNTKADTFIARFRAGLRMEKVNSMKEKEGI 231
            G+A  + FCPSPDVN KADTFIAR R   R+EK+NS++E++ +
Sbjct: 498 GGDAIGATFCPSPDVNVKADTFIARLRGEWRLEKINSLRERKNV 541


>ref|XP_002514089.1| conserved hypothetical protein [Ricinus communis]
           gi|223546545|gb|EEF48043.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 831

 Score =  131 bits (330), Expect = 1e-28
 Identities = 72/160 (45%), Positives = 98/160 (61%), Gaps = 8/160 (5%)
 Frame = -1

Query: 695 KNKTQPTMPQPTQEESPRPRKPT------TPVGRPPLPFKLNS--FYDENLNNGNQSPLL 540
           K K  P  P P    S  PR PT         GRPPLP ++N+  +Y+EN+N+G QSPL+
Sbjct: 355 KRKAPPPPPPPPPAPSTPPRAPTQRRNHTATTGRPPLPTRVNNNNWYEENVNSGGQSPLI 414

Query: 539 HIXXXXXXXPFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPT 360
            +       PF++PG KF V+GDYV+++S+HSSR +SP+L+ V+          +T T  
Sbjct: 415 PMPPPPPPPPFRVPGFKFAVKGDYVKVRSAHSSRCSSPELEEVD--------RQSTDTVN 466

Query: 359 GEAGVSVFCPSPDVNTKADTFIARFRAGLRMEKVNSMKEK 240
              G SVFC SPDVN KAD+FIAR R   R+EK+NS+K +
Sbjct: 467 MMEGGSVFCLSPDVNLKADSFIARLRGEWRLEKINSLKNR 506


>ref|XP_002309203.1| predicted protein [Populus trichocarpa] gi|222855179|gb|EEE92726.1|
           predicted protein [Populus trichocarpa]
          Length = 547

 Score =  125 bits (315), Expect = 7e-27
 Identities = 71/152 (46%), Positives = 99/152 (65%)
 Frame = -1

Query: 695 KNKTQPTMPQPTQEESPRPRKPTTPVGRPPLPFKLNSFYDENLNNGNQSPLLHIXXXXXX 516
           ++K+Q  +P P   E PR R+ +T  G+PPLP  +N+ Y +N+NNG QSPL+ +      
Sbjct: 388 RHKSQVPLPPP---EPPRRRRSST-TGQPPLPTGVNNLYVDNVNNGGQSPLVAMPPLPPP 443

Query: 515 XPFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPTSIHESNSNTSTPTGEAGVSVF 336
            P +MPG +FV RGD V  +S+  SR +SPD + V+  +S  ++ + T    G  G S F
Sbjct: 444 PPCQMPGFQFVPRGDLVEKRSAQGSRCSSPDSEEVDKESS-RQTVNKTDGKDGIGGPS-F 501

Query: 335 CPSPDVNTKADTFIARFRAGLRMEKVNSMKEK 240
           CPSPDVN KADTFIAR R G R+EK+NS++EK
Sbjct: 502 CPSPDVNMKADTFIARLRDGWRLEKINSLREK 533


>emb|CBI35923.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  124 bits (311), Expect = 2e-26
 Identities = 69/134 (51%), Positives = 93/134 (69%), Gaps = 6/134 (4%)
 Frame = -1

Query: 614 RPPLPFKLNSF--YDENLNNGNQSPLLHIXXXXXXXP-FKMPGIKFVVRGDYVRLQSSHS 444
           +PP+P K +SF   D N   G++S L+ +       P FKMP  KFVV GDYVR++S++S
Sbjct: 453 KPPIPEKSSSFNSVDGNPYAGSESLLIPVPPPPPPPPPFKMPDWKFVVHGDYVRIKSTNS 512

Query: 443 SRGNSPDLDSVETPTSIHESNSNT---STPTGEAGVSVFCPSPDVNTKADTFIARFRAGL 273
           SR  SPDLD + +P+S   S S +    T  G++   +FCPSPDVNTKADTFIARFRAGL
Sbjct: 513 SRSGSPDLDYIGSPSSKGPSRSTSLKSETEGGDSAQPLFCPSPDVNTKADTFIARFRAGL 572

Query: 272 RMEKVNSMKEKEGI 231
           ++EK+NS+KEK+ +
Sbjct: 573 KLEKINSIKEKQEV 586


>ref|XP_002329058.1| predicted protein [Populus trichocarpa] gi|222839729|gb|EEE78052.1|
           predicted protein [Populus trichocarpa]
          Length = 560

 Score =  120 bits (301), Expect = 3e-25
 Identities = 73/178 (41%), Positives = 100/178 (56%), Gaps = 21/178 (11%)
 Frame = -1

Query: 701 NRKNKTQPTMPQP---------------TQEESPRPRKPTTPV--GRPPLPFKLNSFY-- 579
           ++K KT+   P P               +Q+ + R +    P+   +PP P K   F+  
Sbjct: 370 SKKGKTKKLHPVPPPPPPPPVTRVSKVVSQKVTSRTKVQVAPLTSDKPPEPAKTRRFHSV 429

Query: 578 DENLNNGNQSPLLHIXXXXXXXPFKMPGIKFVVRGDYVRLQSSHSSRGNSPDLDSVETPT 399
           +EN+  GN S L+ +       PFKMP  KFV  GDYVR+ S +SSR  SPDLDS+E  +
Sbjct: 430 EENVERGNASRLIPLPPPPPPPPFKMPAWKFVHDGDYVRVGSFNSSRSGSPDLDSIEDAS 489

Query: 398 SIHESNSNTSTPTG--EAGVSVFCPSPDVNTKADTFIARFRAGLRMEKVNSMKEKEGI 231
           S  + +S  +  +G   A  ++FCPSPDVNTKAD FIARFRAGL +EKVNS   +  +
Sbjct: 490 SEKDQSSPVAAASGSDSAATALFCPSPDVNTKADNFIARFRAGLTLEKVNSANRRSNL 547


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