BLASTX nr result
ID: Coptis24_contig00013286
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013286 (275 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002319467.1| global transcription factor group [Populus t... 155 2e-36 ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [... 155 3e-36 emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera] 155 3e-36 ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu... 148 4e-34 ref|XP_002318930.1| global transcription factor group [Populus t... 141 6e-32 >ref|XP_002319467.1| global transcription factor group [Populus trichocarpa] gi|222857843|gb|EEE95390.1| global transcription factor group [Populus trichocarpa] Length = 1053 Score = 155 bits (393), Expect = 2e-36 Identities = 76/90 (84%), Positives = 84/90 (93%) Frame = -2 Query: 274 FDLKPSALSNDENLYYDSTSVIICAIGSRYNCYCSNVARSFLIDANPIQNKAYEVLLRAH 95 FDLKPSA SNDENLYYDSTSVIICAIGSRYN YCSNVAR++LIDANP+Q+KAYE+LL+AH Sbjct: 278 FDLKPSAASNDENLYYDSTSVIICAIGSRYNSYCSNVARTYLIDANPMQSKAYEILLQAH 337 Query: 94 EAAIAALKPGNKVSAAYGAALSVVVRDAPE 5 EAAI+ALKPGN VSA Y AALSVV +DAPE Sbjct: 338 EAAISALKPGNMVSAVYQAALSVVEKDAPE 367 >ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera] Length = 1071 Score = 155 bits (392), Expect = 3e-36 Identities = 77/90 (85%), Positives = 84/90 (93%) Frame = -2 Query: 274 FDLKPSALSNDENLYYDSTSVIICAIGSRYNCYCSNVARSFLIDANPIQNKAYEVLLRAH 95 FDL+PSA SNDENLYYDSTSVIICAIGSRYN YCSNVAR+FLIDAN +Q+KAYEVLL+AH Sbjct: 276 FDLRPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAH 335 Query: 94 EAAIAALKPGNKVSAAYGAALSVVVRDAPE 5 EAAI ALKPGNKVSAAY AAL+VV +DAPE Sbjct: 336 EAAIGALKPGNKVSAAYQAALAVVEKDAPE 365 >emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera] Length = 1019 Score = 155 bits (392), Expect = 3e-36 Identities = 77/90 (85%), Positives = 84/90 (93%) Frame = -2 Query: 274 FDLKPSALSNDENLYYDSTSVIICAIGSRYNCYCSNVARSFLIDANPIQNKAYEVLLRAH 95 FDL+PSA SNDENLYYDSTSVIICAIGSRYN YCSNVAR+FLIDAN +Q+KAYEVLL+AH Sbjct: 276 FDLRPSASSNDENLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAH 335 Query: 94 EAAIAALKPGNKVSAAYGAALSVVVRDAPE 5 EAAI ALKPGNKVSAAY AAL+VV +DAPE Sbjct: 336 EAAIGALKPGNKVSAAYQAALAVVEKDAPE 365 >ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis] gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16, putative [Ricinus communis] Length = 1098 Score = 148 bits (374), Expect = 4e-34 Identities = 75/90 (83%), Positives = 82/90 (91%) Frame = -2 Query: 274 FDLKPSALSNDENLYYDSTSVIICAIGSRYNCYCSNVARSFLIDANPIQNKAYEVLLRAH 95 FDLKPSA SND+NLYYDSTSVIICAIGSRYN YCSNVAR+FLIDAN +Q+KAYEVLLRA Sbjct: 274 FDLKPSAASNDDNLYYDSTSVIICAIGSRYNSYCSNVARTFLIDANSMQSKAYEVLLRAQ 333 Query: 94 EAAIAALKPGNKVSAAYGAALSVVVRDAPE 5 EAAI+ALK GN+VSA Y AALSVV +DAPE Sbjct: 334 EAAISALKSGNQVSAVYLAALSVVEKDAPE 363 >ref|XP_002318930.1| global transcription factor group [Populus trichocarpa] gi|222857306|gb|EEE94853.1| global transcription factor group [Populus trichocarpa] Length = 1082 Score = 141 bits (355), Expect = 6e-32 Identities = 70/90 (77%), Positives = 78/90 (86%) Frame = -2 Query: 274 FDLKPSALSNDENLYYDSTSVIICAIGSRYNCYCSNVARSFLIDANPIQNKAYEVLLRAH 95 FDL+PSA SNDE LYYDS SVII A+GSRYN YCSNVAR+ +IDA P+Q+KAY VLL+AH Sbjct: 274 FDLRPSAASNDEPLYYDSASVIIIAVGSRYNSYCSNVARTLMIDATPLQSKAYAVLLKAH 333 Query: 94 EAAIAALKPGNKVSAAYGAALSVVVRDAPE 5 EAAI ALKPGNKVSAAY AALSVV +APE Sbjct: 334 EAAIGALKPGNKVSAAYQAALSVVEEEAPE 363