BLASTX nr result

ID: Coptis24_contig00013279 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013279
         (425 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002328068.1| AP2/ERF domain-containing transcription fact...    89   5e-16
gb|ABO48366.1| C-repeat binding facor 5 [Populus trichocarpa]          89   5e-16
ref|XP_003539462.1| PREDICTED: dehydration-responsive element-bi...    88   8e-16
ref|XP_003541976.1| PREDICTED: dehydration-responsive element-bi...    87   2e-15
gb|ABU55662.1| CBF1-like protein [Ampelopsis glandulosa var. bre...    86   2e-15

>ref|XP_002328068.1| AP2/ERF domain-containing transcription factor [Populus
           trichocarpa] gi|222837583|gb|EEE75948.1| AP2/ERF
           domain-containing transcription factor [Populus
           trichocarpa]
          Length = 219

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/91 (49%), Positives = 51/91 (56%)
 Frame = +2

Query: 95  LYNLHTIDYIPAVISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVXXXXXXXXXXXXXXX 274
           +YNL      P  +  K+  GRKKFKETRHP+YRGVR RNG                   
Sbjct: 29  IYNLKQAQERPVTVLKKKKAGRKKFKETRHPVYRGVRKRNG------------------- 69

Query: 275 XXXXXXKWVCEIRELNKKSRIWLGTHTTPEM 367
                 KWVCE+RE NKKSRIWLGT T+PEM
Sbjct: 70  -----NKWVCEVREPNKKSRIWLGTFTSPEM 95


>gb|ABO48366.1| C-repeat binding facor 5 [Populus trichocarpa]
          Length = 285

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 45/91 (49%), Positives = 51/91 (56%)
 Frame = +2

Query: 95  LYNLHTIDYIPAVISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVXXXXXXXXXXXXXXX 274
           +YNL      P  +  K+  GRKKFKETRHP+YRGVR RNG                   
Sbjct: 29  IYNLKQAQERPVTVLKKKKAGRKKFKETRHPVYRGVRKRNG------------------- 69

Query: 275 XXXXXXKWVCEIRELNKKSRIWLGTHTTPEM 367
                 KWVCE+RE NKKSRIWLGT T+PEM
Sbjct: 70  -----NKWVCEVREPNKKSRIWLGTFTSPEM 95


>ref|XP_003539462.1| PREDICTED: dehydration-responsive element-binding protein 1F-like
           [Glycine max]
          Length = 252

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 43/79 (54%), Positives = 49/79 (62%)
 Frame = +2

Query: 131 VISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVXXXXXXXXXXXXXXXXXXXXXKWVCEI 310
           +ISHKR  GRKKF+ETRHP+YRGVR RNG                         +WVCE+
Sbjct: 58  LISHKRKAGRKKFRETRHPVYRGVRQRNG------------------------NRWVCEV 93

Query: 311 RELNKKSRIWLGTHTTPEM 367
           RE NKKSRIWLGT+ TPEM
Sbjct: 94  REPNKKSRIWLGTYPTPEM 112


>ref|XP_003541976.1| PREDICTED: dehydration-responsive element-binding protein 1F-like
           [Glycine max]
          Length = 243

 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 43/90 (47%), Positives = 52/90 (57%)
 Frame = +2

Query: 98  YNLHTIDYIPAVISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVXXXXXXXXXXXXXXXX 277
           ++  T   +  +I HKR  GRKKF+ETRHP+YRGVR RNG                    
Sbjct: 47  WHAETSKKVVVLIPHKRKAGRKKFRETRHPVYRGVRQRNG-------------------- 86

Query: 278 XXXXXKWVCEIRELNKKSRIWLGTHTTPEM 367
                KWVCE+RE NKKSRIWLGT+ +PEM
Sbjct: 87  ----NKWVCEVREPNKKSRIWLGTYPSPEM 112


>gb|ABU55662.1| CBF1-like protein [Ampelopsis glandulosa var. brevipedunculata]
          Length = 206

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 48/97 (49%), Positives = 50/97 (51%)
 Frame = +2

Query: 134 ISHKRSTGRKKFKETRHPIYRGVRHRNGCKWVXXXXXXXXXXXXXXXXXXXXXKWVCEIR 313
           ISHKR  GRKKF+ETRHPIYRGVR RNG                         KWVCE+R
Sbjct: 15  ISHKRKAGRKKFRETRHPIYRGVRQRNG------------------------NKWVCEVR 50

Query: 314 ELNKKSRIWLGTHTTPEMXXXXXXXXXXXXXGKFAPL 424
           E  KKSRIWLGT  TPEM             G FA L
Sbjct: 51  EPLKKSRIWLGTFPTPEMAARANDVAALALRGHFASL 87


Top