BLASTX nr result

ID: Coptis24_contig00013271 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013271
         (1032 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534100.1| conserved hypothetical protein [Ricinus comm...   110   7e-22
ref|XP_002306289.1| predicted protein [Populus trichocarpa] gi|2...   103   7e-20
ref|XP_002309956.1| predicted protein [Populus trichocarpa] gi|2...   100   8e-19
ref|NP_001235090.1| uncharacterized protein LOC100306441 [Glycin...    84   6e-14
ref|XP_003601916.1| hypothetical protein MTR_3g086760 [Medicago ...    84   6e-14

>ref|XP_002534100.1| conserved hypothetical protein [Ricinus communis]
           gi|223525848|gb|EEF28282.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 215

 Score =  110 bits (274), Expect = 7e-22
 Identities = 73/214 (34%), Positives = 109/214 (50%), Gaps = 9/214 (4%)
 Frame = +1

Query: 184 NNNKCY---MTEEELVVMGPVPLSHSPSKWSGPNLLQNCDLPPPVKVFAGTDKNVLNSIR 354
           NNNK       +E  ++MG +      ++ S  +LLQNCDLPPP+KVF+G+D+ + +S+ 
Sbjct: 8   NNNKKLNPGALDENDILMGALL-----ARKSSIDLLQNCDLPPPLKVFSGSDRTIRSSMN 62

Query: 355 PKHISKVSQEVEDRE--LSSTKIPNESEKLELMKALQLSQSRARTAERKATVMAEERDNX 528
            +  S + +E E+ E  +  +    E+ KLE++KAL+LSQ+RAR AE+KA  +A+E D  
Sbjct: 63  -RVFSMMGKEEENNEFDIHGSVGGGENGKLEILKALRLSQTRAREAEKKAASLAKENDCI 121

Query: 529 XXXXXXXXXRFFAHRQWXXXXXXXXXXXXXXXXXXXXXXCSSYNSRIERD----KGSSEA 696
                    + FA+RQW                      C S   R+E      K   + 
Sbjct: 122 SNALLRESMQLFAYRQWVRLLEVQVMKLQSEGKHQGNRWCCSCGGRLEGVKKLLKDGEDC 181

Query: 697 EDGENVGSLPWCMTLALCLGIAGVGYAVGSRYFF 798
             G+  G + W +  A C+GIAGV  A G RY F
Sbjct: 182 GSGDGGGGVCWILAWAFCIGIAGVRLAFGCRYLF 215


>ref|XP_002306289.1| predicted protein [Populus trichocarpa] gi|222855738|gb|EEE93285.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  103 bits (257), Expect = 7e-20
 Identities = 67/180 (37%), Positives = 94/180 (52%), Gaps = 3/180 (1%)
 Frame = +1

Query: 265 SGPNLLQNCDLPPPVKVFAGTDKNVLNSI-RPKHISKVSQEVEDRELSSTKIPNESEKLE 441
           SG +LLQNCDLPPP+KVF+ +D+ V++S+ R   +++   + +D ++ S       EKLE
Sbjct: 32  SGTDLLQNCDLPPPLKVFSWSDRTVISSMNRGFSMTRREHDRDDFDVYSGSGGENYEKLE 91

Query: 442 LMKALQLSQSRARTAERKATVMAEERDNXXXXXXXXXXRFFAHRQWXXXXXXXXXXXXXX 621
           L+KAL+LSQ+RAR AERKA  + +ERD           + F +RQW              
Sbjct: 92  LLKALRLSQTRAREAERKAASLVKERDCVAKALLHESFQLFVYRQWVRLLEFQVLKAQTQ 151

Query: 622 XXXXXXXXCSSYNSRIERDKGSSEAEDGENVGSL-PW-CMTLALCLGIAGVGYAVGSRYF 795
                   C     R +  K  SE E+    GS   W C+ L  C+GI G+G A G  YF
Sbjct: 152 RQQQEKKLCCGC-GRSKEAKDHSEEEEALCDGSRESWICVALTFCMGIVGLGLAFGCCYF 210


>ref|XP_002309956.1| predicted protein [Populus trichocarpa] gi|222852859|gb|EEE90406.1|
           predicted protein [Populus trichocarpa]
          Length = 211

 Score =  100 bits (248), Expect = 8e-19
 Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 4/212 (1%)
 Frame = +1

Query: 169 SEKKKNNNKCYMTEEELVVMGPVPLSHSPSKWSGPNLLQNCDLPPPVKVFAGTDKNVLNS 348
           S  +K N++    +E  +++GP+    SPS  SG +L+QNCDLPPP+KVF+G+DK V++S
Sbjct: 7   SNNQKMNSRAL--KENDLLLGPLL---SPS--SGFDLMQNCDLPPPLKVFSGSDKTVISS 59

Query: 349 IRPKHISKVSQEVE--DRELSSTKIPNESEKLELMKALQLSQSRARTAERKATVMAEERD 522
           +  +  S + +E +  D ++S        EKLE++KAL+LSQ+RAR AERKA  + +ERD
Sbjct: 60  MN-RAFSMIGREHDHDDFDVSRGCGGENYEKLEVLKALRLSQTRARDAERKAASLIKERD 118

Query: 523 NXXXXXXXXXXRFFAHRQWXXXXXXXXXXXXXXXXXXXXXXCSSYNSRIERDKGSSEAED 702
                      + FA+RQW                      C     R +  K   E E+
Sbjct: 119 CVANALFHDSFQLFAYRQWVRLLEFQVLKAQEQWQQQEKKLCCGC-GRSKEVKDQLEEEE 177

Query: 703 GENVGSLPWCMTLAL--CLGIAGVGYAVGSRY 792
           G + GS  + + +AL   LG  G G A G  Y
Sbjct: 178 GSDDGSREYWINVALKFFLGFVGFGLAFGCCY 209


>ref|NP_001235090.1| uncharacterized protein LOC100306441 [Glycine max]
           gi|255628555|gb|ACU14622.1| unknown [Glycine max]
          Length = 191

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 60/185 (32%), Positives = 90/185 (48%), Gaps = 3/185 (1%)
 Frame = +1

Query: 250 SPSKWSGPNLLQNCDLPPPVKVFAGTDKNVLNSIRPKHISKVSQEVEDRELSSTKIPN-- 423
           S +K SG +L+QNCDLPPP K F G DK+V+ S+    +    +E   ++  + +I +  
Sbjct: 24  SHNKPSGFDLMQNCDLPPPSKFFMGPDKSVILSMN--RLYNREEEQHSKQSGAYRIDSGH 81

Query: 424 -ESEKLELMKALQLSQSRARTAERKATVMAEERDNXXXXXXXXXXRFFAHRQWXXXXXXX 600
            E +K+EL+KAL+ SQ+RAR AE+KA V+  E++             FA+RQ        
Sbjct: 82  DEKDKMELLKALRASQTRAREAEKKAAVLKNEKEGLSMVLLEEAMHLFAYRQQVRLLELQ 141

Query: 601 XXXXXXXXXXXXXXXCSSYNSRIERDKGSSEAEDGENVGSLPWCMTLALCLGIAGVGYAV 780
                               S + R +   +  D E  G + W + L L LGI GV  A+
Sbjct: 142 VFRL--------------QQSLLLRQQPEGDGHDEETTG-VAWVLALVLSLGI-GVTTAL 185

Query: 781 GSRYF 795
             RY+
Sbjct: 186 ACRYY 190


>ref|XP_003601916.1| hypothetical protein MTR_3g086760 [Medicago truncatula]
           gi|355490964|gb|AES72167.1| hypothetical protein
           MTR_3g086760 [Medicago truncatula]
          Length = 208

 Score = 84.0 bits (206), Expect = 6e-14
 Identities = 69/199 (34%), Positives = 97/199 (48%), Gaps = 9/199 (4%)
 Frame = +1

Query: 223 VMGPVPLSHSPSKWSGPNLLQNCDLPPPVKVFAGTDKNVLNSI-RPKHISKVSQEVEDRE 399
           VMG   +SH P+   G +L+QNCDLPPP KVF G DK V+ S+ R  +IS   +E + ++
Sbjct: 16  VMG-FKVSHKPA---GFDLMQNCDLPPPSKVFLGPDKTVIFSMNRVCNISGKEEEQDSKQ 71

Query: 400 LSSTKIPN---ESEKLELMKALQLSQSRARTAERKATVMAEERDNXXXXXXXXXXRFFAH 570
             + ++ N   E +K++L+KAL+ SQ+RAR AE+ A ++ +ERD           + FA 
Sbjct: 72  YGTYQLENGDDEKDKMKLLKALEASQTRAREAEKMAAILRKERDGLSIALLEEAMQLFAC 131

Query: 571 RQWXXXXXXXXXXXXXXXXXXXXXXCS---SYNSRIERDKGSSEAEDG--ENVGSLPWCM 735
           RQ                        S    Y    ER  G    EDG  E   S+ W +
Sbjct: 132 RQQMRLLELQVLKLQQPLWLQQQPAMSMFGCYARSSERTVGFPN-EDGHDEKTTSVTWVL 190

Query: 736 TLALCLGIAGVGYAVGSRY 792
            L   LGI GV  A+   Y
Sbjct: 191 ALIFSLGI-GVASALAWGY 208


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