BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013270
         (1166 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [...   532   e-149
emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]   532   e-149
ref|XP_002319467.1| global transcription factor group [Populus t...   500   e-139
ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu...   489   e-136
gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo...   481   e-133

>ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera]
          Length = 1071

 Score =  532 bits (1371), Expect = e-149
 Identities = 263/345 (76%), Positives = 298/345 (86%), Gaps = 2/345 (0%)
 Frame = +1

Query: 136  MADHRNGNAAPVKGGKSAVV--YTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATP 309
            MA+HRNGNA P  G  S     Y INL+NF KRLK LYSHW+E+ ++ W SSDA+ IATP
Sbjct: 1    MAEHRNGNAKPSDGKASGAASPYAINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATP 60

Query: 310  PVSEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGA 489
            P S+DLRYLKSSALNIWLLG EF ETIMVFM KQIHFLC+QKK SLLE +RK AKE VG 
Sbjct: 61   PASDDLRYLKSSALNIWLLGYEFPETIMVFMKKQIHFLCSQKKASLLEVVRKSAKEAVGV 120

Query: 490  EISMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKN 669
            E+ MHVK +++ GTGLMD IFR +R+   SS HD P+VG+I +E PEG LLE W EKLKN
Sbjct: 121  EVVMHVKAKSDDGTGLMDAIFRAVRAN--SSSHDTPVVGHIGREAPEGKLLEMWTEKLKN 178

Query: 670  SNLQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSM 849
            ++ QL+D+TNGFS+LFA+KDSTELTNVKKAAFLTSSVMKH VVPKLEK+IDEE+KVSHS 
Sbjct: 179  ADFQLSDITNGFSDLFAMKDSTELTNVKKAAFLTSSVMKHFVVPKLEKVIDEEKKVSHSS 238

Query: 850  LMEDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVII 1029
            LM+DTEK+I+EPARVKVKLKAEN+DICYPPIFQSGGEFDL+PSASSNDENLYYDSTSVII
Sbjct: 239  LMDDTEKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVII 298

Query: 1030 CAIGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164
            CAIGSRYNSYCSNVAR+FLIDA  +QSKAYEVLL+AHEAAI ALK
Sbjct: 299  CAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALK 343


>emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera]
          Length = 1019

 Score =  532 bits (1371), Expect = e-149
 Identities = 263/345 (76%), Positives = 298/345 (86%), Gaps = 2/345 (0%)
 Frame = +1

Query: 136  MADHRNGNAAPVKGGKSAVV--YTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATP 309
            MA+HRNGNA P  G  S     Y INL+NF KRLK LYSHW+E+ ++ W SSDA+ IATP
Sbjct: 1    MAEHRNGNAKPSDGKASGAASPYAINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATP 60

Query: 310  PVSEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGA 489
            P S+DLRYLKSSALNIWLLG EF ETIMVFM KQIHFLC+QKK SLLE +RK AKE VG 
Sbjct: 61   PASDDLRYLKSSALNIWLLGYEFPETIMVFMKKQIHFLCSQKKASLLEVVRKSAKEAVGV 120

Query: 490  EISMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKN 669
            E+ MHVK +++ GTGLMD IFR +R+   SS HD P+VG+I +E PEG LLE W EKLKN
Sbjct: 121  EVVMHVKAKSDDGTGLMDAIFRAVRAN--SSSHDTPVVGHIGREAPEGKLLEMWTEKLKN 178

Query: 670  SNLQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSM 849
            ++ QL+D+TNGFS+LFA+KDSTELTNVKKAAFLTSSVMKH VVPKLEK+IDEE+KVSHS 
Sbjct: 179  ADFQLSDITNGFSDLFAMKDSTELTNVKKAAFLTSSVMKHFVVPKLEKVIDEEKKVSHSS 238

Query: 850  LMEDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVII 1029
            LM+DTEK+I+EPARVKVKLKAEN+DICYPPIFQSGGEFDL+PSASSNDENLYYDSTSVII
Sbjct: 239  LMDDTEKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVII 298

Query: 1030 CAIGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164
            CAIGSRYNSYCSNVAR+FLIDA  +QSKAYEVLL+AHEAAI ALK
Sbjct: 299  CAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALK 343


>ref|XP_002319467.1| global transcription factor group [Populus trichocarpa]
            gi|222857843|gb|EEE95390.1| global transcription factor
            group [Populus trichocarpa]
          Length = 1053

 Score =  500 bits (1287), Expect = e-139
 Identities = 243/345 (70%), Positives = 293/345 (84%), Gaps = 2/345 (0%)
 Frame = +1

Query: 136  MADHRNGNAAPVKGGKSAVV--YTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATP 309
            M ++RN NA P  G  +     Y I+L+NF KRL +LYSHW+E+ ++ W +SDA+ IATP
Sbjct: 1    MTENRNANAKPSNGKPTGAASPYAIDLDNFTKRLNMLYSHWKEHHSDLWGASDALAIATP 60

Query: 310  PVSEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGA 489
            P SEDLRYLKSSALNIWL+G EF ETIMVF+ KQI FLC+QKK SLL+ ++K AKE VG 
Sbjct: 61   PASEDLRYLKSSALNIWLVGYEFPETIMVFLKKQILFLCSQKKASLLDVVKKSAKEAVGV 120

Query: 490  EISMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKN 669
            E+ + VK +N+ G+GLMD IF  + +Q  S+GH+ P++G IA+E PEG LLETW EK+KN
Sbjct: 121  EVVILVKTKNDDGSGLMDIIFHAVLAQSNSNGHNTPVIGRIARESPEGKLLETWDEKVKN 180

Query: 670  SNLQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSM 849
             N +L DVTNGFS+LFAVKDSTELTNV+KAAFL+SSVMK  VVPKLEK+IDEE+K+SHS 
Sbjct: 181  VNCELRDVTNGFSDLFAVKDSTELTNVRKAAFLSSSVMKQFVVPKLEKVIDEEKKISHSS 240

Query: 850  LMEDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVII 1029
            LM DTEK+I+EPAR+KVKLKAEN+DICYPP+FQSGGEFDLKPSA+SNDENLYYDSTSVII
Sbjct: 241  LMGDTEKAILEPARIKVKLKAENVDICYPPVFQSGGEFDLKPSAASNDENLYYDSTSVII 300

Query: 1030 CAIGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164
            CAIGSRYNSYCSNVAR++LIDA P+QSKAYE+LL+AHEAAI+ALK
Sbjct: 301  CAIGSRYNSYCSNVARTYLIDANPMQSKAYEILLQAHEAAISALK 345


>ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis]
            gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16,
            putative [Ricinus communis]
          Length = 1098

 Score =  489 bits (1258), Expect = e-136
 Identities = 242/345 (70%), Positives = 289/345 (83%), Gaps = 2/345 (0%)
 Frame = +1

Query: 136  MADHRNGNAAPVKGGKSAVV--YTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATP 309
            MAD RN N  P  G  S     Y I+L+NF KRLK+LY HW EN  E W +SDA+ +ATP
Sbjct: 1    MAD-RNANVRPPNGKPSGGTNPYLIDLDNFTKRLKMLYLHWSENNIELWGASDALAVATP 59

Query: 310  PVSEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGA 489
            P SEDLRYLKS+ALNIWL+G EF ETIMVFM KQ+HFLC+QKK SLL+ ++KPAKE++G 
Sbjct: 60   PPSEDLRYLKSTALNIWLVGYEFPETIMVFMKKQVHFLCSQKKASLLDVVKKPAKESIGV 119

Query: 490  EISMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKN 669
            E+ MHVK +++ G+ LMD+IF  + +   SSG   P++G+IA+E PEG LLE W +KLKN
Sbjct: 120  EVVMHVKTKSDDGSSLMDNIFNAVHA---SSGDKTPVIGHIARESPEGKLLEIWDKKLKN 176

Query: 670  SNLQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSM 849
             N +L+DVTNGFS+LFAVKD+TELT V+KAAFLTSSVMK  VVPKLEK+IDEE+K++HS 
Sbjct: 177  GNCELSDVTNGFSDLFAVKDNTELTYVRKAAFLTSSVMKQFVVPKLEKVIDEEKKITHSS 236

Query: 850  LMEDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVII 1029
             M++TEK+I+EPAR+KVKLKAENIDICYPPIFQSGGEFDLKPSA+SND+NLYYDSTSVII
Sbjct: 237  FMDETEKAILEPARIKVKLKAENIDICYPPIFQSGGEFDLKPSAASNDDNLYYDSTSVII 296

Query: 1030 CAIGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164
            CAIGSRYNSYCSNVAR+FLIDA  +QSKAYEVLLRA EAAI+ALK
Sbjct: 297  CAIGSRYNSYCSNVARTFLIDANSMQSKAYEVLLRAQEAAISALK 341


>gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group]
          Length = 1056

 Score =  481 bits (1237), Expect = e-133
 Identities = 236/343 (68%), Positives = 292/343 (85%)
 Frame = +1

Query: 136  MADHRNGNAAPVKGGKSAVVYTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATPPV 315
            MAD  NGNA P  GG  A  YTINL+NF+KRLKV Y HW+E+ ++ W SS+AI IATPP 
Sbjct: 1    MAD--NGNAKPGGGGSGA--YTINLDNFSKRLKVFYDHWKEHNSDLWGSSNAIAIATPPP 56

Query: 316  SEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGAEI 495
            SEDLRYLKSSAL++WLLG EF ETI+VFM+KQIHFLC+QKK +L+  L+K A + VGA+I
Sbjct: 57   SEDLRYLKSSALDVWLLGYEFPETIIVFMHKQIHFLCSQKKANLIGTLKKAANDAVGADI 116

Query: 496  SMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKNSN 675
             +HVK +N+SG GLM+DI R + +Q KS   D+PIVG+IAKE PEG LLE WA+KL +S+
Sbjct: 117  VLHVKAKNDSGVGLMEDIVRAVCAQSKS---DDPIVGHIAKEAPEGKLLEAWADKLSSSS 173

Query: 676  LQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSMLM 855
            +QL D+TNGFSELFA+KD++E+T VKKA++LTSSVMK+ VVPKLEK+IDEERKV+HS LM
Sbjct: 174  VQLTDITNGFSELFAMKDTSEITCVKKASYLTSSVMKNFVVPKLEKVIDEERKVTHSSLM 233

Query: 856  EDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVIICA 1035
            ++TEK+I++P +VKVKLKAEN+DICYPP+FQSGG+FDLKP ASSND+ LYYDS SVIICA
Sbjct: 234  DETEKAILDPLKVKVKLKAENVDICYPPVFQSGGKFDLKPGASSNDDYLYYDSASVIICA 293

Query: 1036 IGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164
            IG+RY +YCSN+AR+FLIDA P QSKAYE L++AHEAA+ ALK
Sbjct: 294  IGARYGNYCSNMARTFLIDATPAQSKAYETLMKAHEAALEALK 336