BLASTX nr result
ID: Coptis24_contig00013270
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013270 (1166 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [... 532 e-149 emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera] 532 e-149 ref|XP_002319467.1| global transcription factor group [Populus t... 500 e-139 ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinu... 489 e-136 gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japo... 481 e-133 >ref|XP_002276824.2| PREDICTED: FACT complex subunit SPT16-like [Vitis vinifera] Length = 1071 Score = 532 bits (1371), Expect = e-149 Identities = 263/345 (76%), Positives = 298/345 (86%), Gaps = 2/345 (0%) Frame = +1 Query: 136 MADHRNGNAAPVKGGKSAVV--YTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATP 309 MA+HRNGNA P G S Y INL+NF KRLK LYSHW+E+ ++ W SSDA+ IATP Sbjct: 1 MAEHRNGNAKPSDGKASGAASPYAINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATP 60 Query: 310 PVSEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGA 489 P S+DLRYLKSSALNIWLLG EF ETIMVFM KQIHFLC+QKK SLLE +RK AKE VG Sbjct: 61 PASDDLRYLKSSALNIWLLGYEFPETIMVFMKKQIHFLCSQKKASLLEVVRKSAKEAVGV 120 Query: 490 EISMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKN 669 E+ MHVK +++ GTGLMD IFR +R+ SS HD P+VG+I +E PEG LLE W EKLKN Sbjct: 121 EVVMHVKAKSDDGTGLMDAIFRAVRAN--SSSHDTPVVGHIGREAPEGKLLEMWTEKLKN 178 Query: 670 SNLQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSM 849 ++ QL+D+TNGFS+LFA+KDSTELTNVKKAAFLTSSVMKH VVPKLEK+IDEE+KVSHS Sbjct: 179 ADFQLSDITNGFSDLFAMKDSTELTNVKKAAFLTSSVMKHFVVPKLEKVIDEEKKVSHSS 238 Query: 850 LMEDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVII 1029 LM+DTEK+I+EPARVKVKLKAEN+DICYPPIFQSGGEFDL+PSASSNDENLYYDSTSVII Sbjct: 239 LMDDTEKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVII 298 Query: 1030 CAIGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164 CAIGSRYNSYCSNVAR+FLIDA +QSKAYEVLL+AHEAAI ALK Sbjct: 299 CAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALK 343 >emb|CAN64799.1| hypothetical protein VITISV_017318 [Vitis vinifera] Length = 1019 Score = 532 bits (1371), Expect = e-149 Identities = 263/345 (76%), Positives = 298/345 (86%), Gaps = 2/345 (0%) Frame = +1 Query: 136 MADHRNGNAAPVKGGKSAVV--YTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATP 309 MA+HRNGNA P G S Y INL+NF KRLK LYSHW+E+ ++ W SSDA+ IATP Sbjct: 1 MAEHRNGNAKPSDGKASGAASPYAINLDNFTKRLKTLYSHWKEHSSDLWGSSDALAIATP 60 Query: 310 PVSEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGA 489 P S+DLRYLKSSALNIWLLG EF ETIMVFM KQIHFLC+QKK SLLE +RK AKE VG Sbjct: 61 PASDDLRYLKSSALNIWLLGYEFPETIMVFMKKQIHFLCSQKKASLLEVVRKSAKEAVGV 120 Query: 490 EISMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKN 669 E+ MHVK +++ GTGLMD IFR +R+ SS HD P+VG+I +E PEG LLE W EKLKN Sbjct: 121 EVVMHVKAKSDDGTGLMDAIFRAVRAN--SSSHDTPVVGHIGREAPEGKLLEMWTEKLKN 178 Query: 670 SNLQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSM 849 ++ QL+D+TNGFS+LFA+KDSTELTNVKKAAFLTSSVMKH VVPKLEK+IDEE+KVSHS Sbjct: 179 ADFQLSDITNGFSDLFAMKDSTELTNVKKAAFLTSSVMKHFVVPKLEKVIDEEKKVSHSS 238 Query: 850 LMEDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVII 1029 LM+DTEK+I+EPARVKVKLKAEN+DICYPPIFQSGGEFDL+PSASSNDENLYYDSTSVII Sbjct: 239 LMDDTEKAILEPARVKVKLKAENVDICYPPIFQSGGEFDLRPSASSNDENLYYDSTSVII 298 Query: 1030 CAIGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164 CAIGSRYNSYCSNVAR+FLIDA +QSKAYEVLL+AHEAAI ALK Sbjct: 299 CAIGSRYNSYCSNVARTFLIDANAMQSKAYEVLLKAHEAAIGALK 343 >ref|XP_002319467.1| global transcription factor group [Populus trichocarpa] gi|222857843|gb|EEE95390.1| global transcription factor group [Populus trichocarpa] Length = 1053 Score = 500 bits (1287), Expect = e-139 Identities = 243/345 (70%), Positives = 293/345 (84%), Gaps = 2/345 (0%) Frame = +1 Query: 136 MADHRNGNAAPVKGGKSAVV--YTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATP 309 M ++RN NA P G + Y I+L+NF KRL +LYSHW+E+ ++ W +SDA+ IATP Sbjct: 1 MTENRNANAKPSNGKPTGAASPYAIDLDNFTKRLNMLYSHWKEHHSDLWGASDALAIATP 60 Query: 310 PVSEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGA 489 P SEDLRYLKSSALNIWL+G EF ETIMVF+ KQI FLC+QKK SLL+ ++K AKE VG Sbjct: 61 PASEDLRYLKSSALNIWLVGYEFPETIMVFLKKQILFLCSQKKASLLDVVKKSAKEAVGV 120 Query: 490 EISMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKN 669 E+ + VK +N+ G+GLMD IF + +Q S+GH+ P++G IA+E PEG LLETW EK+KN Sbjct: 121 EVVILVKTKNDDGSGLMDIIFHAVLAQSNSNGHNTPVIGRIARESPEGKLLETWDEKVKN 180 Query: 670 SNLQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSM 849 N +L DVTNGFS+LFAVKDSTELTNV+KAAFL+SSVMK VVPKLEK+IDEE+K+SHS Sbjct: 181 VNCELRDVTNGFSDLFAVKDSTELTNVRKAAFLSSSVMKQFVVPKLEKVIDEEKKISHSS 240 Query: 850 LMEDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVII 1029 LM DTEK+I+EPAR+KVKLKAEN+DICYPP+FQSGGEFDLKPSA+SNDENLYYDSTSVII Sbjct: 241 LMGDTEKAILEPARIKVKLKAENVDICYPPVFQSGGEFDLKPSAASNDENLYYDSTSVII 300 Query: 1030 CAIGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164 CAIGSRYNSYCSNVAR++LIDA P+QSKAYE+LL+AHEAAI+ALK Sbjct: 301 CAIGSRYNSYCSNVARTYLIDANPMQSKAYEILLQAHEAAISALK 345 >ref|XP_002512565.1| FACT complex subunit SPT16, putative [Ricinus communis] gi|223548526|gb|EEF50017.1| FACT complex subunit SPT16, putative [Ricinus communis] Length = 1098 Score = 489 bits (1258), Expect = e-136 Identities = 242/345 (70%), Positives = 289/345 (83%), Gaps = 2/345 (0%) Frame = +1 Query: 136 MADHRNGNAAPVKGGKSAVV--YTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATP 309 MAD RN N P G S Y I+L+NF KRLK+LY HW EN E W +SDA+ +ATP Sbjct: 1 MAD-RNANVRPPNGKPSGGTNPYLIDLDNFTKRLKMLYLHWSENNIELWGASDALAVATP 59 Query: 310 PVSEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGA 489 P SEDLRYLKS+ALNIWL+G EF ETIMVFM KQ+HFLC+QKK SLL+ ++KPAKE++G Sbjct: 60 PPSEDLRYLKSTALNIWLVGYEFPETIMVFMKKQVHFLCSQKKASLLDVVKKPAKESIGV 119 Query: 490 EISMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKN 669 E+ MHVK +++ G+ LMD+IF + + SSG P++G+IA+E PEG LLE W +KLKN Sbjct: 120 EVVMHVKTKSDDGSSLMDNIFNAVHA---SSGDKTPVIGHIARESPEGKLLEIWDKKLKN 176 Query: 670 SNLQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSM 849 N +L+DVTNGFS+LFAVKD+TELT V+KAAFLTSSVMK VVPKLEK+IDEE+K++HS Sbjct: 177 GNCELSDVTNGFSDLFAVKDNTELTYVRKAAFLTSSVMKQFVVPKLEKVIDEEKKITHSS 236 Query: 850 LMEDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVII 1029 M++TEK+I+EPAR+KVKLKAENIDICYPPIFQSGGEFDLKPSA+SND+NLYYDSTSVII Sbjct: 237 FMDETEKAILEPARIKVKLKAENIDICYPPIFQSGGEFDLKPSAASNDDNLYYDSTSVII 296 Query: 1030 CAIGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164 CAIGSRYNSYCSNVAR+FLIDA +QSKAYEVLLRA EAAI+ALK Sbjct: 297 CAIGSRYNSYCSNVARTFLIDANSMQSKAYEVLLRAQEAAISALK 341 >gb|EEE60736.1| hypothetical protein OsJ_14260 [Oryza sativa Japonica Group] Length = 1056 Score = 481 bits (1237), Expect = e-133 Identities = 236/343 (68%), Positives = 292/343 (85%) Frame = +1 Query: 136 MADHRNGNAAPVKGGKSAVVYTINLENFAKRLKVLYSHWRENKTEYWESSDAIVIATPPV 315 MAD NGNA P GG A YTINL+NF+KRLKV Y HW+E+ ++ W SS+AI IATPP Sbjct: 1 MAD--NGNAKPGGGGSGA--YTINLDNFSKRLKVFYDHWKEHNSDLWGSSNAIAIATPPP 56 Query: 316 SEDLRYLKSSALNIWLLGLEFSETIMVFMNKQIHFLCTQKKISLLECLRKPAKETVGAEI 495 SEDLRYLKSSAL++WLLG EF ETI+VFM+KQIHFLC+QKK +L+ L+K A + VGA+I Sbjct: 57 SEDLRYLKSSALDVWLLGYEFPETIIVFMHKQIHFLCSQKKANLIGTLKKAANDAVGADI 116 Query: 496 SMHVKGRNESGTGLMDDIFRVIRSQLKSSGHDNPIVGYIAKEEPEGNLLETWAEKLKNSN 675 +HVK +N+SG GLM+DI R + +Q KS D+PIVG+IAKE PEG LLE WA+KL +S+ Sbjct: 117 VLHVKAKNDSGVGLMEDIVRAVCAQSKS---DDPIVGHIAKEAPEGKLLEAWADKLSSSS 173 Query: 676 LQLADVTNGFSELFAVKDSTELTNVKKAAFLTSSVMKHHVVPKLEKIIDEERKVSHSMLM 855 +QL D+TNGFSELFA+KD++E+T VKKA++LTSSVMK+ VVPKLEK+IDEERKV+HS LM Sbjct: 174 VQLTDITNGFSELFAMKDTSEITCVKKASYLTSSVMKNFVVPKLEKVIDEERKVTHSSLM 233 Query: 856 EDTEKSIVEPARVKVKLKAENIDICYPPIFQSGGEFDLKPSASSNDENLYYDSTSVIICA 1035 ++TEK+I++P +VKVKLKAEN+DICYPP+FQSGG+FDLKP ASSND+ LYYDS SVIICA Sbjct: 234 DETEKAILDPLKVKVKLKAENVDICYPPVFQSGGKFDLKPGASSNDDYLYYDSASVIICA 293 Query: 1036 IGSRYNSYCSNVARSFLIDAIPIQSKAYEVLLRAHEAAIAALK 1164 IG+RY +YCSN+AR+FLIDA P QSKAYE L++AHEAA+ ALK Sbjct: 294 IGARYGNYCSNMARTFLIDATPAQSKAYETLMKAHEAALEALK 336