BLASTX nr result

ID: Coptis24_contig00013265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013265
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002273377.1| PREDICTED: rhomboid protease gluP [Vitis vin...   226   5e-57
ref|XP_002304070.1| predicted protein [Populus trichocarpa] gi|2...   219   4e-55
gb|ABK93694.1| unknown [Populus trichocarpa]                          219   4e-55
ref|XP_002531417.1| KOM, putative [Ricinus communis] gi|22352896...   208   8e-52
ref|NP_001242663.1| uncharacterized protein LOC100805315 [Glycin...   193   3e-47

>ref|XP_002273377.1| PREDICTED: rhomboid protease gluP [Vitis vinifera]
           gi|298204568|emb|CBI23843.3| unnamed protein product
           [Vitis vinifera]
          Length = 330

 Score =  226 bits (575), Expect = 5e-57
 Identities = 120/217 (55%), Positives = 145/217 (66%)
 Frame = +2

Query: 65  ALPSPQRFPNPRNXXXXXXXXXXXXXXRVGNIVTLRTPNHLHLLLRSSFKEFTHFAHVHG 244
           A+P P RFP  +               R+G+ +  R   HL   LRSSFK   H AHV G
Sbjct: 5   AVPQPSRFPLSKVGPTPAHLITTAASLRLGHFIH-RQYIHLGFFLRSSFKRLAHLAHVPG 63

Query: 245 FKDAWNERVVLLFKGVEFLESRVSMSNTCSSCLYYFGNNGSISGFGDERKPFLETPSRNA 424
            K+ W  + +  F+G+ F     S S TCSS LY+FG   +  G  DE   + E P RN+
Sbjct: 64  LKNIWFGKAIQ-FQGISFPSD--SFSATCSSYLYFFGGEETRKGSRDEGMSYSEAPRRNS 120

Query: 425 RKPFNGRLWTNVLIAINVLAYVAQLASHGKLVLWGAKINSLIDKGQLWRLATSSFLHANV 604
            +   GR WTN+LIAINVL ++ Q A+ GKL+LWGAKINSLIDKGQ WRLATSSFLHAN+
Sbjct: 121 LR---GRQWTNILIAINVLVFIGQAATQGKLLLWGAKINSLIDKGQFWRLATSSFLHANI 177

Query: 605 GHLMVNCYSLNSVGPTMENISGPRRFLAVYFTSAIAS 715
           GHLMVNC+SLNSVGPT+EN+SGPRR+LAVYFTSAIAS
Sbjct: 178 GHLMVNCFSLNSVGPTVENLSGPRRYLAVYFTSAIAS 214


>ref|XP_002304070.1| predicted protein [Populus trichocarpa] gi|222841502|gb|EEE79049.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score =  219 bits (558), Expect = 4e-55
 Identities = 109/188 (57%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
 Frame = +2

Query: 155 NIVTLRTPNHLHLLLRSSFKEFTHFAHVHGFKDAWNERVVLLFKGVEFLE-SRVSMSNTC 331
           N++T         L+ SSFK  +H  HV   KD W+E+   L +G++ L+ S    ++TC
Sbjct: 22  NLITTVASLRFGFLVHSSFKNISHLYHVPRLKDVWHEKASQL-QGIDVLQFSNDVFASTC 80

Query: 332 SSCLYYFGNNGSISGFGDERKPFLETPSRNARKPFNGRLWTNVLIAINVLAYVAQLASHG 511
           SSCL +F   G+  GF +E  P LET  R++   FNGR WTN+L+AIN+L Y AQ+A+ G
Sbjct: 81  SSCLCFFNGGGTRKGFRNEGSPNLETSGRSS---FNGRQWTNILLAINILVYFAQIATRG 137

Query: 512 KLVLWGAKINSLIDKGQLWRLATSSFLHANVGHLMVNCYSLNSVGPTMENISGPRRFLAV 691
           KL+ WGAK+NSLIDKGQ WRLATSS LHAN+GHLMVNCYSLNSVGPT+EN+SGPRRF+AV
Sbjct: 138 KLLFWGAKVNSLIDKGQFWRLATSSVLHANIGHLMVNCYSLNSVGPTIENLSGPRRFIAV 197

Query: 692 YFTSAIAS 715
           Y TSAIAS
Sbjct: 198 YLTSAIAS 205


>gb|ABK93694.1| unknown [Populus trichocarpa]
          Length = 325

 Score =  219 bits (558), Expect = 4e-55
 Identities = 109/188 (57%), Positives = 137/188 (72%), Gaps = 1/188 (0%)
 Frame = +2

Query: 155 NIVTLRTPNHLHLLLRSSFKEFTHFAHVHGFKDAWNERVVLLFKGVEFLE-SRVSMSNTC 331
           N++T         L+ SSFK  +H  HV   KD W+E+   L +G++ L+ S    ++TC
Sbjct: 22  NLITTVASLRFGFLVHSSFKNISHLYHVPRLKDVWHEKASQL-QGIDVLQFSNDVFASTC 80

Query: 332 SSCLYYFGNNGSISGFGDERKPFLETPSRNARKPFNGRLWTNVLIAINVLAYVAQLASHG 511
           SSCL +F   G+  GF +E  P LET  R++   FNGR WTN+L+AIN+L Y AQ+A+ G
Sbjct: 81  SSCLCFFNGGGTRKGFRNEGSPNLETSGRSS---FNGRQWTNILLAINILVYFAQIATRG 137

Query: 512 KLVLWGAKINSLIDKGQLWRLATSSFLHANVGHLMVNCYSLNSVGPTMENISGPRRFLAV 691
           KL+ WGAK+NSLIDKGQ WRLATSS LHAN+GHLMVNCYSLNSVGPT+EN+SGPRRF+AV
Sbjct: 138 KLLFWGAKVNSLIDKGQFWRLATSSVLHANIGHLMVNCYSLNSVGPTIENLSGPRRFIAV 197

Query: 692 YFTSAIAS 715
           Y TSAIAS
Sbjct: 198 YLTSAIAS 205


>ref|XP_002531417.1| KOM, putative [Ricinus communis] gi|223528967|gb|EEF30959.1| KOM,
           putative [Ricinus communis]
          Length = 340

 Score =  208 bits (530), Expect = 8e-52
 Identities = 105/188 (55%), Positives = 132/188 (70%), Gaps = 1/188 (0%)
 Frame = +2

Query: 155 NIVTLRTPNHLHLLLRSSFKEFTHFAHVHGFKDAWNERVVLLFKGVEFLE-SRVSMSNTC 331
           +++   T   L  LL SSFK+ +H  HV   KD W  R    FKG++FL+ S   +++T 
Sbjct: 40  HLIATATSLRLSFLLHSSFKKLSHLCHVPRLKDIWC-RKASQFKGIDFLQISNDVLASTT 98

Query: 332 SSCLYYFGNNGSISGFGDERKPFLETPSRNARKPFNGRLWTNVLIAINVLAYVAQLASHG 511
           S CL +F    +  G G +  P+ E    N+   FNGR WTN+L+AIN+L + AQ A+ G
Sbjct: 99  SHCLSFFNGGETGKGHGIQGAPYSEASKSNS---FNGRKWTNILLAINILVFAAQFATQG 155

Query: 512 KLVLWGAKINSLIDKGQLWRLATSSFLHANVGHLMVNCYSLNSVGPTMENISGPRRFLAV 691
           KL+ WGAK+NSLIDKGQ WRL TSSFLHAN+GHLMVN YSLNS+GPT+EN+SGPRRFLAV
Sbjct: 156 KLLFWGAKVNSLIDKGQFWRLVTSSFLHANIGHLMVNSYSLNSIGPTIENLSGPRRFLAV 215

Query: 692 YFTSAIAS 715
           YFTSAIAS
Sbjct: 216 YFTSAIAS 223


>ref|NP_001242663.1| uncharacterized protein LOC100805315 [Glycine max]
           gi|255640088|gb|ACU20335.1| unknown [Glycine max]
          Length = 342

 Score =  193 bits (491), Expect = 3e-47
 Identities = 104/192 (54%), Positives = 128/192 (66%), Gaps = 4/192 (2%)
 Frame = +2

Query: 152 GNIVTLRTPNHLHL--LLRSSFKEFTHFAHVHGFKDAWNERVVLLFKGVEFLESRVSMSN 325
           G+++  R  +HL L  LL S FK+     H+    D W +R   L  G+ +L+       
Sbjct: 35  GHLLRRRATHHLRLGVLLHSCFKKLAPLTHIFRLNDKWCQRCFQL-NGLNYLQLSTGDLT 93

Query: 326 TCSSCLYYFGNNGSISGFGDER--KPFLETPSRNARKPFNGRLWTNVLIAINVLAYVAQL 499
           +  S  + F N G   G G  R  K  +     + + PFNGR WT +L+A NVL Y+AQL
Sbjct: 94  SSWSTSFSFFNGG---GDGGRRYGKAGMSNSKMSGKDPFNGRKWTEILLAANVLFYIAQL 150

Query: 500 ASHGKLVLWGAKINSLIDKGQLWRLATSSFLHANVGHLMVNCYSLNSVGPTMENISGPRR 679
           A+ GKL+LWGAKINSLIDKGQLWRLATSSFLHAN+GHL+VNCYSLNSVGPT+E+ SGPRR
Sbjct: 151 ATQGKLLLWGAKINSLIDKGQLWRLATSSFLHANIGHLLVNCYSLNSVGPTVESFSGPRR 210

Query: 680 FLAVYFTSAIAS 715
           FLAVYF SAIAS
Sbjct: 211 FLAVYFISAIAS 222


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