BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013260
         (418 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI18190.3| unnamed protein product [Vitis vinifera]               73   2e-11
emb|CAN81434.1| hypothetical protein VITISV_010699 [Vitis vinifera]    73   2e-11
ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|2...    64   1e-08
gb|AED89989.1| PSL3b [Solanum chacoense x Solanum tuberosum]           63   2e-08
gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum]           62   4e-08

>emb|CBI18190.3| unnamed protein product [Vitis vinifera]
          Length = 869

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/118 (41%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
 Frame = +2

Query: 32  SGSRLRQEADVILSKRRAGRVPFQPLFVNTMSSSISEASGLKA-TRSSISVNNDQTVEIT 208
           S +R + E ++++ KR A RVPF  L  N    S SE S L A TRSS SVN   T    
Sbjct: 550 SRNRGKLEKEIMVMKRGAERVPFHSLLENAACKSKSEVSILGAKTRSSNSVNCTGTTGNA 609

Query: 209 APYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIVPRMAVARVVAL 382
              + N S  E  R W MVVD  CLLNKESR+S            I+PRM +  +  L
Sbjct: 610 TNSSFNNSAGEGKRRWNMVVDATCLLNKESRKSLQLLQGLKGTQLIIPRMVIRELDCL 667


>emb|CAN81434.1| hypothetical protein VITISV_010699 [Vitis vinifera]
          Length = 828

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 49/118 (41%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
 Frame = +2

Query: 32  SGSRLRQEADVILSKRRAGRVPFQPLFVNTMSSSISEASGLKA-TRSSISVNNDQTVEIT 208
           S +R + E ++++ KR A RVPF  L  N    S SE S L A TRSS SVN   T    
Sbjct: 550 SRNRGKLEKEIMVMKRGAERVPFHSLLENAACKSKSEVSILGAKTRSSNSVNCTGTTGNA 609

Query: 209 APYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIVPRMAVARVVAL 382
              + N S  E  R W MVVD  CLLNKESR+S            I+PRM +  +  L
Sbjct: 610 TNSSFNNSAGEGKRRWNMVVDATCLLNKESRKSLQLLQGLKGTQLIIPRMVIRELDCL 667


>ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|222835601|gb|EEE74036.1|
            predicted protein [Populus trichocarpa]
          Length = 1079

 Score = 63.9 bits (154), Expect = 1e-08
 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 1/128 (0%)
 Frame = +2

Query: 2    LSDSRLKKPLSGSRLRQEADVILSKRRAGRVPFQPLFVNTMSSSISEAS-GLKATRSSIS 178
            L  ++L  P S ++++ + +++L + +A RVP Q L VN   +S SEAS    ATRSSIS
Sbjct: 745  LQQTKLAIPASRNQVKFKQEMVLEECKAERVPLQSLLVNFSGNSNSEASVPNDATRSSIS 804

Query: 179  VNNDQTVEITAPYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIVPRM 358
            VN  Q +   + +T      +  R W MV DT  L++KESR+S            ++P+M
Sbjct: 805  VNCSQIMR-KSNFTG-----DGKRRWTMVADTASLVDKESRKSLQLLQGLKGTHLVIPKM 858

Query: 359  AVARVVAL 382
             +  +  L
Sbjct: 859  VIRELDCL 866


>gb|AED89989.1| PSL3b [Solanum chacoense x Solanum tuberosum]
          Length = 630

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 4/131 (3%)
 Frame = +2

Query: 2   LSDSRLKKPLSGS---RLRQEADVILSKRRAGRVPFQPLFV-NTMSSSISEASGLKATRS 169
           L+D  L++ +S S   R +   +V + K R  RVPFQPL V N+ + + SE+   K   +
Sbjct: 497 LNDKVLEEKISASLSSRNKARMEVTMLKNRTDRVPFQPLLVTNSPNKTKSESPERKVKLN 556

Query: 170 SISVNNDQTVEITAPYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIV 349
           +  V   + +E   P+ AN + RE  R W MVVD   LLNKESR++            I+
Sbjct: 557 AKPVKCQEIME-AYPF-ANNNAREEKRRWTMVVDITSLLNKESRKALQLLQGLKGTCLII 614

Query: 350 PRMAVARVVAL 382
           PR+     +AL
Sbjct: 615 PRIGNELTLAL 625


>gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum]
          Length = 764

 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 4/125 (3%)
 Frame = +2

Query: 2   LSDSRLKKPLSGS---RLRQEADVILSKRRAGRVPFQPLFV-NTMSSSISEASGLKATRS 169
           L+D  L++ +S S   R +   +V + K R  RVPFQPL V N+ + + SE+   K   +
Sbjct: 497 LNDKVLEEKISASLSSRNKARMEVTMLKNRTDRVPFQPLLVTNSPNKTKSESPERKVKLN 556

Query: 170 SISVNNDQTVEITAPYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIV 349
           +  V   + +E   P+ AN + RE  R W MVVD   LLNKESR++            I+
Sbjct: 557 AKPVKCQEIME-AYPF-ANNNAREEKRRWTMVVDITSLLNKESRKALQLLQGLKGTCLII 614

Query: 350 PRMAV 364
           PR+ +
Sbjct: 615 PRIGL 619