BLASTX nr result
ID: Coptis24_contig00013260
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00013260 (418 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI18190.3| unnamed protein product [Vitis vinifera] 73 2e-11 emb|CAN81434.1| hypothetical protein VITISV_010699 [Vitis vinifera] 73 2e-11 ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|2... 64 1e-08 gb|AED89989.1| PSL3b [Solanum chacoense x Solanum tuberosum] 63 2e-08 gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum] 62 4e-08 >emb|CBI18190.3| unnamed protein product [Vitis vinifera] Length = 869 Score = 73.2 bits (178), Expect = 2e-11 Identities = 49/118 (41%), Positives = 60/118 (50%), Gaps = 1/118 (0%) Frame = +2 Query: 32 SGSRLRQEADVILSKRRAGRVPFQPLFVNTMSSSISEASGLKA-TRSSISVNNDQTVEIT 208 S +R + E ++++ KR A RVPF L N S SE S L A TRSS SVN T Sbjct: 550 SRNRGKLEKEIMVMKRGAERVPFHSLLENAACKSKSEVSILGAKTRSSNSVNCTGTTGNA 609 Query: 209 APYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIVPRMAVARVVAL 382 + N S E R W MVVD CLLNKESR+S I+PRM + + L Sbjct: 610 TNSSFNNSAGEGKRRWNMVVDATCLLNKESRKSLQLLQGLKGTQLIIPRMVIRELDCL 667 >emb|CAN81434.1| hypothetical protein VITISV_010699 [Vitis vinifera] Length = 828 Score = 73.2 bits (178), Expect = 2e-11 Identities = 49/118 (41%), Positives = 60/118 (50%), Gaps = 1/118 (0%) Frame = +2 Query: 32 SGSRLRQEADVILSKRRAGRVPFQPLFVNTMSSSISEASGLKA-TRSSISVNNDQTVEIT 208 S +R + E ++++ KR A RVPF L N S SE S L A TRSS SVN T Sbjct: 550 SRNRGKLEKEIMVMKRGAERVPFHSLLENAACKSKSEVSILGAKTRSSNSVNCTGTTGNA 609 Query: 209 APYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIVPRMAVARVVAL 382 + N S E R W MVVD CLLNKESR+S I+PRM + + L Sbjct: 610 TNSSFNNSAGEGKRRWNMVVDATCLLNKESRKSLQLLQGLKGTQLIIPRMVIRELDCL 667 >ref|XP_002327231.1| predicted protein [Populus trichocarpa] gi|222835601|gb|EEE74036.1| predicted protein [Populus trichocarpa] Length = 1079 Score = 63.9 bits (154), Expect = 1e-08 Identities = 44/128 (34%), Positives = 69/128 (53%), Gaps = 1/128 (0%) Frame = +2 Query: 2 LSDSRLKKPLSGSRLRQEADVILSKRRAGRVPFQPLFVNTMSSSISEAS-GLKATRSSIS 178 L ++L P S ++++ + +++L + +A RVP Q L VN +S SEAS ATRSSIS Sbjct: 745 LQQTKLAIPASRNQVKFKQEMVLEECKAERVPLQSLLVNFSGNSNSEASVPNDATRSSIS 804 Query: 179 VNNDQTVEITAPYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIVPRM 358 VN Q + + +T + R W MV DT L++KESR+S ++P+M Sbjct: 805 VNCSQIMR-KSNFTG-----DGKRRWTMVADTASLVDKESRKSLQLLQGLKGTHLVIPKM 858 Query: 359 AVARVVAL 382 + + L Sbjct: 859 VIRELDCL 866 >gb|AED89989.1| PSL3b [Solanum chacoense x Solanum tuberosum] Length = 630 Score = 63.2 bits (152), Expect = 2e-08 Identities = 46/131 (35%), Positives = 68/131 (51%), Gaps = 4/131 (3%) Frame = +2 Query: 2 LSDSRLKKPLSGS---RLRQEADVILSKRRAGRVPFQPLFV-NTMSSSISEASGLKATRS 169 L+D L++ +S S R + +V + K R RVPFQPL V N+ + + SE+ K + Sbjct: 497 LNDKVLEEKISASLSSRNKARMEVTMLKNRTDRVPFQPLLVTNSPNKTKSESPERKVKLN 556 Query: 170 SISVNNDQTVEITAPYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIV 349 + V + +E P+ AN + RE R W MVVD LLNKESR++ I+ Sbjct: 557 AKPVKCQEIME-AYPF-ANNNAREEKRRWTMVVDITSLLNKESRKALQLLQGLKGTCLII 614 Query: 350 PRMAVARVVAL 382 PR+ +AL Sbjct: 615 PRIGNELTLAL 625 >gb|AED89990.1| PSL3c [Solanum chacoense x Solanum tuberosum] Length = 764 Score = 62.4 bits (150), Expect = 4e-08 Identities = 44/125 (35%), Positives = 66/125 (52%), Gaps = 4/125 (3%) Frame = +2 Query: 2 LSDSRLKKPLSGS---RLRQEADVILSKRRAGRVPFQPLFV-NTMSSSISEASGLKATRS 169 L+D L++ +S S R + +V + K R RVPFQPL V N+ + + SE+ K + Sbjct: 497 LNDKVLEEKISASLSSRNKARMEVTMLKNRTDRVPFQPLLVTNSPNKTKSESPERKVKLN 556 Query: 170 SISVNNDQTVEITAPYTANQSFRERNRMWYMVVDTNCLLNKESRRSXXXXXXXXXXXXIV 349 + V + +E P+ AN + RE R W MVVD LLNKESR++ I+ Sbjct: 557 AKPVKCQEIME-AYPF-ANNNAREEKRRWTMVVDITSLLNKESRKALQLLQGLKGTCLII 614 Query: 350 PRMAV 364 PR+ + Sbjct: 615 PRIGL 619