BLASTX nr result

ID: Coptis24_contig00013256 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013256
         (1088 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283891.2| PREDICTED: uncharacterized protein LOC100247...   291   1e-76
ref|XP_002514025.1| conserved hypothetical protein [Ricinus comm...   278   2e-72
ref|XP_002310494.1| predicted protein [Populus trichocarpa] gi|2...   276   5e-72
ref|XP_002323954.1| predicted protein [Populus trichocarpa] gi|2...   276   6e-72
ref|XP_002301090.1| predicted protein [Populus trichocarpa] gi|2...   270   6e-70

>ref|XP_002283891.2| PREDICTED: uncharacterized protein LOC100247170 [Vitis vinifera]
            gi|147776518|emb|CAN74009.1| hypothetical protein
            VITISV_003546 [Vitis vinifera]
          Length = 403

 Score =  291 bits (746), Expect = 1e-76
 Identities = 162/304 (53%), Positives = 205/304 (67%), Gaps = 7/304 (2%)
 Frame = -2

Query: 1087 ALFVSSGFYNLNDYENRNILIDNGIDLVSEADQERLSSIPDGSFDFVISSALHASE-FVD 911
            +LFVS G  +   YE+R ++ DN +DL+S +D ER SSIP+ + DF       A+  F+D
Sbjct: 101  SLFVS-GASDQAAYESR-VISDNKMDLISVSDFERQSSIPEATVDFAFVHDFSATATFID 158

Query: 910  RSLKIGGIALVQLNTDPSNAFEKPSNYKIVYVRKFDSTIVALRKISDYE-KSPAKRRLCS 734
            R+LKIGGIA+VQL+ D S AF+KPSNY+IVY+R+FDST+VA+RK    +  S  +RRLC 
Sbjct: 159  RTLKIGGIAVVQLSNDASVAFDKPSNYRIVYLRRFDSTVVAMRKTDHTQTNSRTQRRLCG 218

Query: 733  FQSEAKMAALDGLEDVILEPPRGSSSVFKKYSRKTKYLPELTGDSLDGYSRRVFIDVTLP 554
              SEAK AAL  LEDV+LEPPR +S     Y ++TKYLP+LTGDSL+ Y RRVFI V  P
Sbjct: 219  LSSEAKKAALKNLEDVLLEPPRAASRKSSSYLKRTKYLPDLTGDSLESYPRRVFIHVGPP 278

Query: 553  GKSEG-SIEWFKKNYPTRNRVFDIFNIEMVPEES---TMPQIGVSDWLRKNXXXXXXXXX 386
               EG ++ WF  +YPTRNR F+++ IE   EES      ++G+S+WLRKN         
Sbjct: 279  ETDEGKNVRWFASHYPTRNRDFEMYKIETTTEESKGKEEAELGMSEWLRKNVKEEEYVVM 338

Query: 385  XXXXXXXXXMISSKAICLVDELFLECKHQWQRGKK-NKSRRAYWECLALYGRLRDEGIAV 209
                     M+ SKAI LVDELFLECK Q    +K N   RAYWECLALYG+LRDEG+AV
Sbjct: 339  KAEAEVVEEMVKSKAIGLVDELFLECKPQSLNNRKSNTGGRAYWECLALYGQLRDEGVAV 398

Query: 208  HQWW 197
            HQWW
Sbjct: 399  HQWW 402


>ref|XP_002514025.1| conserved hypothetical protein [Ricinus communis]
            gi|223547111|gb|EEF48608.1| conserved hypothetical
            protein [Ricinus communis]
          Length = 422

 Score =  278 bits (711), Expect = 2e-72
 Identities = 153/312 (49%), Positives = 207/312 (66%), Gaps = 14/312 (4%)
 Frame = -2

Query: 1087 ALFVSSGFYNLND----YENRNILI-DNGIDLVSEADQERLSSIPDGSFDFVISSALHAS 923
            A+FV++G  N ND    Y +  IL  D  ++ +S +D ++   + D SFDF ++ + HA+
Sbjct: 113  AVFVTNG--NGNDDRAIYSSERILNEDYDMEFISVSDLDQQQKVNDASFDFALTYSFHAA 170

Query: 922  -EFVDRSLKIGGIALVQLNTDPSNAFEKPSNYKIVYVRKFDSTIVALRKISDYEKS-PAK 749
             EF+DR+LK+GGIA+VQL  +PS  F KP NYKIVY+R+F  T +A++K      +   +
Sbjct: 171  QEFIDRTLKVGGIAIVQLGDNPSFLFNKPMNYKIVYLRRFQWTFMAMKKTGYGNTNLSTQ 230

Query: 748  RRLCSFQSEAKMAALDGLEDVILEPPRGSSSVFKKYSRKTKYLPELTGDSLDGYSRRVFI 569
            R+L S+++EA+ A L+ LEDV+LEPPR +S   + Y ++TKYLP+L GDSL+ Y RRVFI
Sbjct: 231  RKLLSYRTEARKAVLNNLEDVLLEPPRAASGKSRTYLKRTKYLPDLMGDSLESYPRRVFI 290

Query: 568  DVTLPGKSEGS-IEWFKKNYPTRNRVFDIFNIEMVPEEST------MPQIGVSDWLRKNX 410
            DV LP +  GS I WF K+YPTRN  F+++ IE V E S+      + +IG+S WL KN 
Sbjct: 291  DVGLPERERGSGIGWFAKHYPTRNLDFEMYKIETVTEVSSGKEVPQVEEIGMSGWLSKNV 350

Query: 409  XXXXXXXXXXXXXXXXXMISSKAICLVDELFLECKHQWQRGKKNKSRRAYWECLALYGRL 230
                             MI S++I LVDELF++CK +   GK N SRRAYWECLALYGRL
Sbjct: 351  KEEEYVVMKAEAEVVEEMIESRSIRLVDELFMDCKPRGHGGKGNGSRRAYWECLALYGRL 410

Query: 229  RDEGIAVHQWWG 194
            RDEGIAVHQWWG
Sbjct: 411  RDEGIAVHQWWG 422


>ref|XP_002310494.1| predicted protein [Populus trichocarpa] gi|222853397|gb|EEE90944.1|
            predicted protein [Populus trichocarpa]
          Length = 379

 Score =  276 bits (707), Expect = 5e-72
 Identities = 147/303 (48%), Positives = 195/303 (64%), Gaps = 6/303 (1%)
 Frame = -2

Query: 1087 ALFVSSGFYNLNDYENRNILIDNGIDLVSEADQERLSSIPDGSFDFVISSALHASEFVDR 908
            AL V SG   + D      L DN ID VSE+D E+    P+ +FDF ++  +  + FVDR
Sbjct: 79   ALIVCSGVGAVVD--TSRFLNDNDIDFVSESDLEQERLFPNATFDFALTLRIGDARFVDR 136

Query: 907  SLKIGGIALVQLNTDPSNAFEKPSNYKIVYVRKFDSTIVALRKISDYEK---SPAKRRLC 737
             +K+GGI + QL++DPSNAF+K SNY+ VY+R++DSTIVA+RK S   +   S AKRR  
Sbjct: 137  VVKVGGILVTQLSSDPSNAFQKLSNYRAVYLRRYDSTIVAMRKTSLVNQVVVSSAKRRPL 196

Query: 736  SFQSEAKMAALDGLEDVILEPPRGSSSVFKKYSRKTKYLPELTGDSLDGYSRRVFIDVTL 557
                +AK  AL GLEDV+LEPPR + +  + Y ++ KYLP L GDSL+ YSRRVFI   L
Sbjct: 197  QLALDAKKTALQGLEDVLLEPPRKALAKSRVYLKRFKYLPNLLGDSLEDYSRRVFIHAGL 256

Query: 556  PGKSEGSIEWFKKNYPTRNRVFDIFNIEMVPE---ESTMPQIGVSDWLRKNXXXXXXXXX 386
              + +G+++WF +NYPTRN+ F+  +I   PE   +       VS+WL KN         
Sbjct: 257  HEEKKGAMQWFNENYPTRNQDFEFHSINTSPEGHSKRVASPADVSNWLMKNVREDEFVVM 316

Query: 385  XXXXXXXXXMISSKAICLVDELFLECKHQWQRGKKNKSRRAYWECLALYGRLRDEGIAVH 206
                     M+  K I LVDELFLEC +QW+ G++ KS+RAYWEC+ALYGRLRDEG+AVH
Sbjct: 317  KAEAEVAEEMMKRKTIGLVDELFLECNNQWKNGERKKSKRAYWECVALYGRLRDEGVAVH 376

Query: 205  QWW 197
            QWW
Sbjct: 377  QWW 379


>ref|XP_002323954.1| predicted protein [Populus trichocarpa] gi|222866956|gb|EEF04087.1|
            predicted protein [Populus trichocarpa]
          Length = 322

 Score =  276 bits (706), Expect = 6e-72
 Identities = 147/304 (48%), Positives = 196/304 (64%), Gaps = 7/304 (2%)
 Frame = -2

Query: 1087 ALFVSSGFYNLNDYENRNILIDNGIDLVSEADQERLSSIPDGSFDFVISSALHASEFVDR 908
            AL V SG   + D  +  +L  N ID VSE+D E  S  P+ +FDF ++  +  ++F+DR
Sbjct: 22   ALIVFSGVGAVVD--SSRLLNVNDIDFVSESDLEEESLFPNATFDFALTLHIKDAKFLDR 79

Query: 907  SLKIGGIALVQLNTDPSNAFEKPSNYKIVYVRKFDSTIVALRK---ISDYEKSPAKRRLC 737
             +K+GGI + QL+ DPSNAF+K SNY++VY+R++DSTIVA+RK   ++    S AKRR  
Sbjct: 80   IVKVGGILVAQLSNDPSNAFQKMSNYRVVYLRRYDSTIVAMRKTSLVNQIVSSVAKRRPL 139

Query: 736  SFQSEAKMAALDGLEDVILEPPRGSSSVFKKYSRKTKYLPELTGDSLDGYSRRVFIDVTL 557
                +AK  AL GLED++LEPPR +    + Y +  KYLP+L GDSL+G+SRR FID   
Sbjct: 140  QLALDAKKEALQGLEDILLEPPRKTPEKSRMYLKGFKYLPDLLGDSLEGFSRRFFIDAGS 199

Query: 556  PGKSEGSIEWFKKNYPTRNRVFDIFNIEM----VPEESTMPQIGVSDWLRKNXXXXXXXX 389
              +  G++ WF +NYPTRN+ F+  +I M    VP     P   VS+WL KN        
Sbjct: 200  QEEENGAMLWFNENYPTRNQDFEFHSINMLSEGVPGRVASP-ADVSNWLMKNVREDEFVV 258

Query: 388  XXXXXXXXXXMISSKAICLVDELFLECKHQWQRGKKNKSRRAYWECLALYGRLRDEGIAV 209
                      M+  K I LVDELFLEC +QWQ+G++ KSRRAYWEC+ALYGRLRDEG+AV
Sbjct: 259  MKAEAEVAEEMMKRKTIGLVDELFLECNNQWQKGQRKKSRRAYWECVALYGRLRDEGVAV 318

Query: 208  HQWW 197
            HQWW
Sbjct: 319  HQWW 322


>ref|XP_002301090.1| predicted protein [Populus trichocarpa] gi|222842816|gb|EEE80363.1|
            predicted protein [Populus trichocarpa]
          Length = 386

 Score =  270 bits (689), Expect = 6e-70
 Identities = 156/314 (49%), Positives = 200/314 (63%), Gaps = 16/314 (5%)
 Frame = -2

Query: 1087 ALFVSSGFYNLNDYENR----NILIDNGIDLVSEADQERLSSIPDGSFDFVIS--SALHA 926
            A+FVSSG  N N   N      IL  N   +VS A+ +R  SIP  + DF  +       
Sbjct: 76   AVFVSSGNGNGNGIGNAIHISEILNVNDTKIVSAANLDRQRSIPGEALDFAFTYDDFQTT 135

Query: 925  SEFVDRSLKIGGIALVQLNTDPSNAFEKPSNYKIVYVRKFDST-IVALRKIS--DYEKSP 755
            SEF+DR+LK+GGIA+VQL+ DPS+AF+KP NYKIVY+R+F +  I+A+RK    D     
Sbjct: 136  SEFIDRTLKVGGIAVVQLSNDPSSAFDKPFNYKIVYLRRFQAANILAMRKTGYGDANLIT 195

Query: 754  AKRRLCSFQSEAKMAALDGLEDVILEPPRGSSSVFKKYSRKTKYLPELTGDSLDGYSRRV 575
             +R L    +EAK AAL+ LEDV+LEPPR +S    +Y ++T+YLP+L GDSL+ Y RRV
Sbjct: 196  QRRLLGYHANEAKKAALENLEDVLLEPPRAASGKSSRYLKRTRYLPDLMGDSLESYPRRV 255

Query: 574  FIDVTLPGKSEGSIE-WFKKNYPTRNRVFDIFNIEMVPEEST------MPQIGVSDWLRK 416
            FIDV LP K  GS   WF KNYPTRN  F+++ IE V E+S+      + ++G+SDWL+ 
Sbjct: 256  FIDVGLPEKEGGSGNGWFAKNYPTRNLDFEMYKIETVTEQSSGKEVPQVEEVGMSDWLKH 315

Query: 415  NXXXXXXXXXXXXXXXXXXMISSKAICLVDELFLECKHQWQRGKKNKSRRAYWECLALYG 236
            N                  M+ SKAI LVDELFLECK    R   N S++ YWECLALYG
Sbjct: 316  NVKGEEYVVMKAEAEVVEEMVKSKAIRLVDELFLECK---PRRNGNGSKKTYWECLALYG 372

Query: 235  RLRDEGIAVHQWWG 194
            +LRDEG+AVHQWWG
Sbjct: 373  KLRDEGVAVHQWWG 386


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