BLASTX nr result

ID: Coptis24_contig00013255 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013255
         (1021 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001140513.1| uncharacterized protein LOC100272576 [Zea ma...   291   2e-76
ref|NP_001105964.1| cytidine deaminase2 [Zea mays] gi|119394647|...   290   3e-76
gb|ABL74489.1| putative cytidine deaminase [Zea mays] gi|1193946...   289   9e-76
gb|ACG33580.1| cytidine/deoxycytidylate deaminase family protein...   288   1e-75
ref|XP_003563029.1| PREDICTED: guanine deaminase-like [Brachypod...   285   1e-74

>ref|NP_001140513.1| uncharacterized protein LOC100272576 [Zea mays]
           gi|194699798|gb|ACF83983.1| unknown [Zea mays]
           gi|195610442|gb|ACG27051.1| cytidine/deoxycytidylate
           deaminase family protein [Zea mays]
           gi|414873752|tpg|DAA52309.1| TPA: putative
           cytidine/deoxycytidylate deaminase family protein [Zea
           mays]
          Length = 186

 Score =  291 bits (744), Expect = 2e-76
 Identities = 140/186 (75%), Positives = 160/186 (86%), Gaps = 3/186 (1%)
 Frame = +2

Query: 308 MDEAN---AKDGTVSVASAFSGYQEAVQARDHKFLTRAVEEAYKGVECGHGGPFGAVIVH 478
           M+EA    +KDGT+SVASAF+G+QEAVQ RDHKFL++AVEEAY+GV+CG GGPFGAV+VH
Sbjct: 1   MEEAKVVESKDGTISVASAFAGHQEAVQDRDHKFLSKAVEEAYRGVDCGDGGPFGAVVVH 60

Query: 479 DDEVVVSCHNEVLKNTDPTAHAEVTAIREACKKLGKVELADCEMYASCEPCPMCFGAIHL 658
           +DEV+VSCHN VLKNTDPTAHAEVTAIREACKKLGK+EL+DCE+YASCEPCPMCFGA+HL
Sbjct: 61  NDEVIVSCHNMVLKNTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHL 120

Query: 659 SRIKRLVYGAKXXXXXXXXXXXXXXXXLRGTGFYQKANLEIKRADGKEAVFAEQVFEKTK 838
           SRIKRLVYGAK                LRGTG+YQKAN+EIK+ADG  A+ AEQVFEKTK
Sbjct: 121 SRIKRLVYGAKAEAAIAIGFDDFIADALRGTGYYQKANMEIKQADGNGAMIAEQVFEKTK 180

Query: 839 AKFQMY 856
           AKFQMY
Sbjct: 181 AKFQMY 186


>ref|NP_001105964.1| cytidine deaminase2 [Zea mays] gi|119394647|gb|ABL74485.1| putative
           cytidine deaminase [Zea mays]
           gi|119394649|gb|ABL74486.1| putative cytidine deaminase
           [Zea mays] gi|414589186|tpg|DAA39757.1| TPA: putative
           cytidine/deoxycytidylate deaminase family protein [Zea
           mays]
          Length = 186

 Score =  290 bits (743), Expect = 3e-76
 Identities = 143/186 (76%), Positives = 158/186 (84%), Gaps = 3/186 (1%)
 Frame = +2

Query: 308 MDEAN---AKDGTVSVASAFSGYQEAVQARDHKFLTRAVEEAYKGVECGHGGPFGAVIVH 478
           MDEA    +KDGT+SVASAF+GYQEAVQ RDHKFLT+AVEEAY+GV+CG GGPFGAV+V 
Sbjct: 1   MDEAQVVESKDGTISVASAFAGYQEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVC 60

Query: 479 DDEVVVSCHNEVLKNTDPTAHAEVTAIREACKKLGKVELADCEMYASCEPCPMCFGAIHL 658
           +DEVVVSCHN VLK+TDPTAHAEVTAIREACKKLGK+EL+DCE+YASCEPCPMCFGA+HL
Sbjct: 61  NDEVVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHL 120

Query: 659 SRIKRLVYGAKXXXXXXXXXXXXXXXXLRGTGFYQKANLEIKRADGKEAVFAEQVFEKTK 838
           SRIKRLVYGAK                LRGTGFYQKANLEIK+ADG  A+ AEQVFEKTK
Sbjct: 121 SRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANLEIKKADGNGALIAEQVFEKTK 180

Query: 839 AKFQMY 856
            KFQMY
Sbjct: 181 EKFQMY 186


>gb|ABL74489.1| putative cytidine deaminase [Zea mays] gi|119394657|gb|ABL74490.1|
           putative cytidine deaminase [Zea mays]
          Length = 186

 Score =  289 bits (739), Expect = 9e-76
 Identities = 141/186 (75%), Positives = 158/186 (84%), Gaps = 3/186 (1%)
 Frame = +2

Query: 308 MDEAN---AKDGTVSVASAFSGYQEAVQARDHKFLTRAVEEAYKGVECGHGGPFGAVIVH 478
           MDEA    +KDGT+SVASAF+G+QEAVQ +DHKFLT+AVEEAY+GV+CG GGPFGAV+V 
Sbjct: 1   MDEAQVVESKDGTISVASAFAGFQEAVQDKDHKFLTKAVEEAYRGVDCGDGGPFGAVVVR 60

Query: 479 DDEVVVSCHNEVLKNTDPTAHAEVTAIREACKKLGKVELADCEMYASCEPCPMCFGAIHL 658
           +DEVVVSCHN VLK+TDPTAHAEVTAIREACKKLGK+EL+DCE+YASCEPCPMCFGA+HL
Sbjct: 61  NDEVVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFGAVHL 120

Query: 659 SRIKRLVYGAKXXXXXXXXXXXXXXXXLRGTGFYQKANLEIKRADGKEAVFAEQVFEKTK 838
           SRIKRLVYGAK                LRGTGFYQKANLEIK+ADG  A+ AEQVFEKTK
Sbjct: 121 SRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANLEIKKADGNGALIAEQVFEKTK 180

Query: 839 AKFQMY 856
            KFQMY
Sbjct: 181 EKFQMY 186


>gb|ACG33580.1| cytidine/deoxycytidylate deaminase family protein [Zea mays]
          Length = 186

 Score =  288 bits (737), Expect = 1e-75
 Identities = 142/186 (76%), Positives = 157/186 (84%), Gaps = 3/186 (1%)
 Frame = +2

Query: 308 MDEAN---AKDGTVSVASAFSGYQEAVQARDHKFLTRAVEEAYKGVECGHGGPFGAVIVH 478
           MDEA    +KDGT+SVASAF+GYQEAVQ RDHKFLT+AVEEAY+GV+CG GGPFGAV+V 
Sbjct: 1   MDEAQVVESKDGTISVASAFAGYQEAVQDRDHKFLTKAVEEAYRGVDCGDGGPFGAVVVC 60

Query: 479 DDEVVVSCHNEVLKNTDPTAHAEVTAIREACKKLGKVELADCEMYASCEPCPMCFGAIHL 658
           +DEVVVSCHN VLK+TDPTAHAEVTAIREACKKLGK+EL+DCE+YASCEPCPMCF A+HL
Sbjct: 61  NDEVVVSCHNMVLKHTDPTAHAEVTAIREACKKLGKIELSDCEIYASCEPCPMCFSAVHL 120

Query: 659 SRIKRLVYGAKXXXXXXXXXXXXXXXXLRGTGFYQKANLEIKRADGKEAVFAEQVFEKTK 838
           SRIKRLVYGAK                LRGTGFYQKANLEIK+ADG  A+ AEQVFEKTK
Sbjct: 121 SRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANLEIKKADGNGALIAEQVFEKTK 180

Query: 839 AKFQMY 856
            KFQMY
Sbjct: 181 EKFQMY 186


>ref|XP_003563029.1| PREDICTED: guanine deaminase-like [Brachypodium distachyon]
          Length = 186

 Score =  285 bits (730), Expect = 1e-74
 Identities = 139/186 (74%), Positives = 155/186 (83%), Gaps = 3/186 (1%)
 Frame = +2

Query: 308 MDEANA---KDGTVSVASAFSGYQEAVQARDHKFLTRAVEEAYKGVECGHGGPFGAVIVH 478
           MDEA     KDGT+SVASAF+G+QEAV+ RDHKFL++AVEEAY+GVECGHGGPFGAV+V 
Sbjct: 1   MDEAKVVETKDGTISVASAFAGHQEAVRERDHKFLSKAVEEAYRGVECGHGGPFGAVVVR 60

Query: 479 DDEVVVSCHNEVLKNTDPTAHAEVTAIREACKKLGKVELADCEMYASCEPCPMCFGAIHL 658
           +DEVVVSCHN VL  TDPTAHAEVTAIREACKKLGK+EL+DCEM+ASCEPCPMCFGA+HL
Sbjct: 61  NDEVVVSCHNMVLDKTDPTAHAEVTAIREACKKLGKIELSDCEMFASCEPCPMCFGAVHL 120

Query: 659 SRIKRLVYGAKXXXXXXXXXXXXXXXXLRGTGFYQKANLEIKRADGKEAVFAEQVFEKTK 838
           SRIKRLVYGAK                LRGTGFYQKAN+EIKRADG  A+ AEQVFE TK
Sbjct: 121 SRIKRLVYGAKAEAAIAIGFDDFIADALRGTGFYQKANMEIKRADGNGALIAEQVFENTK 180

Query: 839 AKFQMY 856
            KF+MY
Sbjct: 181 EKFRMY 186


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