BLASTX nr result
ID: Coptis24_contig00013235
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00013235
(1822 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [S... 362 2e-97
ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [S... 362 2e-97
ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [S... 359 1e-96
ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [S... 358 3e-96
ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [S... 346 1e-92
>ref|XP_002450204.1| hypothetical protein SORBIDRAFT_05g001940 [Sorghum bicolor]
gi|241936047|gb|EES09192.1| hypothetical protein
SORBIDRAFT_05g001940 [Sorghum bicolor]
Length = 526
Score = 362 bits (929), Expect = 2e-97
Identities = 173/319 (54%), Positives = 239/319 (74%), Gaps = 1/319 (0%)
Frame = +2
Query: 5 GGDFRQTLPIIPRGTRTQTINACIVKSDLWKQVRIFRLKENMRTKSDPSYSAYLLKLGNA 184
GGDFRQ LP++PRGTR Q +A + +S LW+ +R RL NMR +SDP ++ YLL++GN
Sbjct: 206 GGDFRQVLPVVPRGTRAQVTDATLQRSYLWESIRKIRLSRNMRAQSDPWFADYLLRIGNG 265
Query: 185 EEPYVENDMIRVPDDMVIPW-ENEDSIDRLIDAVFPNLCDNARDLNYIVDRAILTPLNSH 361
E + ++ + +PDD++I + +NE+S+++LI VFP+L NAR Y+ RAIL+ N H
Sbjct: 266 TEETIGDEYVCLPDDILIAYTDNEESVNKLIQEVFPSLERNARSSTYMSTRAILSTTNEH 325
Query: 362 VNRLNDRVLKFLPGQEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPIM 541
V++LN ++ PG+E V+YSFDSV+DD RN Y + LN+I+P GLP HEL++K P++
Sbjct: 326 VDQLNASMINKFPGEEKVYYSFDSVDDDSRNNYPIDFLNSITPNGLPPHELKIKTNCPVI 385
Query: 542 LLRNINPGYGMCNGTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQL 721
LLRN++P G+CNGTRL+ F N I AEIV G AG++ FIPRIP+ S+D++LPF+L
Sbjct: 386 LLRNLDPNNGLCNGTRLMVRTFQDNAIDAEIVGGQHAGKRVFIPRIPMSPSDDISLPFKL 445
Query: 722 IRKQFPVRLSFALTINKAQGQTIKHVGIYLPEPVFSHGQMYVALSRGVSRECTKIMVKNG 901
RKQFP+RLSFA+TINK QGQTI HVGIYLPEPVFSHGQ+YVALSRGVSR+ T+++ K
Sbjct: 446 KRKQFPIRLSFAMTINKTQGQTIPHVGIYLPEPVFSHGQLYVALSRGVSRQTTRVLAKPK 505
Query: 902 RLPRFPGTHTRNVVYKEVM 958
+ G +T+N+VYK+V+
Sbjct: 506 KELDPSGKYTKNIVYKDVL 524
>ref|XP_002440902.1| hypothetical protein SORBIDRAFT_09g016160 [Sorghum bicolor]
gi|241946187|gb|EES19332.1| hypothetical protein
SORBIDRAFT_09g016160 [Sorghum bicolor]
Length = 1379
Score = 362 bits (928), Expect = 2e-97
Identities = 172/321 (53%), Positives = 241/321 (75%), Gaps = 2/321 (0%)
Frame = +2
Query: 5 GGDFRQTLPIIPRGTRTQTINACIVKSDLWKQVRIFRLKENMRTKSDPSYSAYLLKLGNA 184
GGDFRQ LP++PRGTR Q +A + +S LW VR RL NMR +SDP +S YLL++GN
Sbjct: 1059 GGDFRQVLPVVPRGTRGQVTDATLQRSYLWDSVRKIRLTRNMRAQSDPWFSDYLLRIGNG 1118
Query: 185 EEPYVENDMIRVPDDMVIPW--ENEDSIDRLIDAVFPNLCDNARDLNYIVDRAILTPLNS 358
E + ND +++P+D VI + + +D +++LI VFP+L DNA+ Y+ RAIL+ N
Sbjct: 1119 NEETIANDYVQMPEDTVIGYTDDEDDCLNKLIQHVFPSLEDNAKSTAYMSSRAILSTKNE 1178
Query: 359 HVNRLNDRVLKFLPGQEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPI 538
HV+RLN++++ PG+E V++SFDSV+D+ RN Y + +N+I+P GLP H L++K+ P+
Sbjct: 1179 HVDRLNEKMIDRFPGEERVYHSFDSVDDESRNNYPIDFINSITPNGLPPHVLKVKVNCPV 1238
Query: 539 MLLRNINPGYGMCNGTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQ 718
+LLRN++P G+CNGTRL+ F N I AEIV GH AGR+ F+PRIP+ S+D++LPF+
Sbjct: 1239 ILLRNLDPNNGLCNGTRLMVRAFQDNAIDAEIVAGHHAGRRVFLPRIPMSPSDDISLPFK 1298
Query: 719 LIRKQFPVRLSFALTINKAQGQTIKHVGIYLPEPVFSHGQMYVALSRGVSRECTKIMVKN 898
+ RKQFP+RLSFA+TINKAQGQTI +VGIYLPEPVFSHGQ+YVALSRGVSR+ T+I+ K
Sbjct: 1299 MKRKQFPIRLSFAMTINKAQGQTIPNVGIYLPEPVFSHGQLYVALSRGVSRQTTRILSKP 1358
Query: 899 GRLPRFPGTHTRNVVYKEVMS 961
+ G T+N+V+K+V++
Sbjct: 1359 NKELDSTGRSTKNIVWKDVLN 1379
>ref|XP_002439629.1| hypothetical protein SORBIDRAFT_09g017230 [Sorghum bicolor]
gi|241944914|gb|EES18059.1| hypothetical protein
SORBIDRAFT_09g017230 [Sorghum bicolor]
Length = 512
Score = 359 bits (922), Expect = 1e-96
Identities = 173/321 (53%), Positives = 238/321 (74%), Gaps = 2/321 (0%)
Frame = +2
Query: 5 GGDFRQTLPIIPRGTRTQTINACIVKSDLWKQVRIFRLKENMRTKSDPSYSAYLLKLGNA 184
GGDFRQ LP++PRGTR Q +A + +S LW +R RL NMR ++DP +S+YLL++GN
Sbjct: 191 GGDFRQVLPVVPRGTRAQVTDASLQRSYLWDNIRKIRLTRNMRAQTDPWFSSYLLRIGNG 250
Query: 185 EEPYVENDMIRVPDDMVIPW--ENEDSIDRLIDAVFPNLCDNARDLNYIVDRAILTPLNS 358
E +EN+ +R+P+D+VI + +NEDSI+ LI VFP+L +NAR Y+ RAIL+ N
Sbjct: 251 TEETIENNYVRLPEDIVIGYTDDNEDSINTLIQHVFPSLEENARSAEYMSTRAILSTKNE 310
Query: 359 HVNRLNDRVLKFLPGQEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPI 538
H+++LN +++ PG+E V++SFDS +DD RN Y E LN+I+P GLP H L +KI P+
Sbjct: 311 HLDQLNTKMITMFPGEEKVYHSFDSADDDSRNNYPIEFLNSITPNGLPPHVLIVKINCPV 370
Query: 539 MLLRNINPGYGMCNGTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQ 718
+LLRN++P G+CNGTRL+ F N I AEIV G G++ FI RIP+ S+D++LPF+
Sbjct: 371 ILLRNLDPNNGLCNGTRLMVRAFQDNAIDAEIVGGQHQGKRVFITRIPMSPSDDISLPFK 430
Query: 719 LIRKQFPVRLSFALTINKAQGQTIKHVGIYLPEPVFSHGQMYVALSRGVSRECTKIMVKN 898
L RKQFP+RLSFA+TINKAQGQTI +VGIYLPEPVFSHGQ+YVALSRGVSR T+++ K
Sbjct: 431 LKRKQFPIRLSFAMTINKAQGQTIPNVGIYLPEPVFSHGQLYVALSRGVSRSTTRVLAKP 490
Query: 899 GRLPRFPGTHTRNVVYKEVMS 961
+ G T+N+VYK++++
Sbjct: 491 NQELDGTGNTTKNIVYKDILN 511
>ref|XP_002446463.1| hypothetical protein SORBIDRAFT_06g016400 [Sorghum bicolor]
gi|241937646|gb|EES10791.1| hypothetical protein
SORBIDRAFT_06g016400 [Sorghum bicolor]
Length = 998
Score = 358 bits (918), Expect = 3e-96
Identities = 174/321 (54%), Positives = 237/321 (73%), Gaps = 2/321 (0%)
Frame = +2
Query: 5 GGDFRQTLPIIPRGTRTQTINACIVKSDLWKQVRIFRLKENMRTKSDPSYSAYLLKLGNA 184
GGDFRQ LP++PRGTR Q +A + +S LW +R L NMR ++DP +S+YLL++ N
Sbjct: 677 GGDFRQVLPVVPRGTRAQVTDASLQRSYLWDNIRKIILTRNMRAQTDPWFSSYLLRIRNG 736
Query: 185 EEPYVENDMIRVPDDMVIPW--ENEDSIDRLIDAVFPNLCDNARDLNYIVDRAILTPLNS 358
E +END +R+P+D+VI + +NEDSI+ LI VFP+L +NAR Y+ RAIL+ N
Sbjct: 737 TEETIENDYVRLPEDIVIGYTDDNEDSINTLIQHVFPSLEENARSAEYMSTRAILSTKNE 796
Query: 359 HVNRLNDRVLKFLPGQEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPI 538
HV++LN +++ PG+E V++SFDSV+DD RN Y E LN+I+P GLP H L +KI P+
Sbjct: 797 HVDQLNTKMIAMFPGEEKVYHSFDSVDDDSRNNYPIEFLNSITPNGLPPHVLIVKINCPV 856
Query: 539 MLLRNINPGYGMCNGTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQ 718
+LLRN++P G+CNGTRL+ F N I AEIV G G++ FI RIP+ S+D++LPF+
Sbjct: 857 ILLRNLDPNNGLCNGTRLMVRAFQDNAIDAEIVGGQHQGKRVFITRIPMSPSDDISLPFK 916
Query: 719 LIRKQFPVRLSFALTINKAQGQTIKHVGIYLPEPVFSHGQMYVALSRGVSRECTKIMVKN 898
L RKQFP+RLSFA+TINKAQGQTI +VGIYLPEPVFSHGQ+YVALSRGVSR T+++ K
Sbjct: 917 LKRKQFPIRLSFAMTINKAQGQTIPNVGIYLPEPVFSHGQLYVALSRGVSRSTTRVLAKP 976
Query: 899 GRLPRFPGTHTRNVVYKEVMS 961
+ G T+N+VYK++++
Sbjct: 977 NQELDGTGNTTKNIVYKDILN 997
>ref|XP_002440837.1| hypothetical protein SORBIDRAFT_09g008040 [Sorghum bicolor]
gi|241946122|gb|EES19267.1| hypothetical protein
SORBIDRAFT_09g008040 [Sorghum bicolor]
Length = 1679
Score = 346 bits (888), Expect = 1e-92
Identities = 168/320 (52%), Positives = 236/320 (73%), Gaps = 1/320 (0%)
Frame = +2
Query: 5 GGDFRQTLPIIPRGTRTQTINACIVKSDLWKQVRIFRLKENMRTKSDPSYSAYLLKLGNA 184
GGDFRQ LP++PRGTR Q +A + KS LW Q+R RL +NMR +SDP +S YLL++GN
Sbjct: 1359 GGDFRQVLPVVPRGTRAQVTDATLQKSYLWDQIRKIRLTQNMRAQSDPWFSEYLLRIGNG 1418
Query: 185 EEPYVENDMIRVPDDMVIPW-ENEDSIDRLIDAVFPNLCDNARDLNYIVDRAILTPLNSH 361
E + +D +R+PDD+VI + + +++++RLI +VFP+L ++A Y+ RAIL+ N H
Sbjct: 1419 TEETIGDDYVRLPDDIVIGYTDTDEAVNRLISSVFPSLEEHATSAAYMSGRAILSTKNEH 1478
Query: 362 VNRLNDRVLKFLPGQEVVFYSFDSVEDDFRNLYQQELLNNISPGGLPAHELRLKIGAPIM 541
V+RLN +++ PG+E V++SFD++ DD +N + + LN+I+P GLP HEL+LKI P++
Sbjct: 1479 VDRLNALMIERFPGEEKVYHSFDTIVDDPQNHFPIDFLNSITPNGLPPHELKLKINCPVI 1538
Query: 542 LLRNINPGYGMCNGTRLVCLGFDTNHIHAEIVTGHAAGRKEFIPRIPLKTSEDLNLPFQL 721
LLRN++P G+CNGTRL+ N I AEIV G ++ FIPR+PL S+D++LPF+
Sbjct: 1539 LLRNLDPNNGLCNGTRLMVRALQDNAIDAEIVGGQHVRKRVFIPRLPLSPSDDISLPFKF 1598
Query: 722 IRKQFPVRLSFALTINKAQGQTIKHVGIYLPEPVFSHGQMYVALSRGVSRECTKIMVKNG 901
RKQFPVRLSFA+TINK+QGQTI +VGIYLPEPVFSHGQ+YV LSRGVSR T+I+ K
Sbjct: 1599 KRKQFPVRLSFAMTINKSQGQTIPNVGIYLPEPVFSHGQLYVGLSRGVSRSTTRILAKPK 1658
Query: 902 RLPRFPGTHTRNVVYKEVMS 961
G T+N+V+K+V++
Sbjct: 1659 EELDPTGKSTKNIVFKDVLN 1678