BLASTX nr result

ID: Coptis24_contig00013230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013230
         (508 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521019.1| protein transporter, putative [Ricinus commu...   164   9e-39
ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   162   3e-38
ref|XP_002307637.1| predicted protein [Populus trichocarpa] gi|2...   162   3e-38
ref|XP_002285680.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinife...   160   8e-38
ref|XP_002300787.1| predicted protein [Populus trichocarpa] gi|2...   159   2e-37

>ref|XP_002521019.1| protein transporter, putative [Ricinus communis]
           gi|223539856|gb|EEF41436.1| protein transporter,
           putative [Ricinus communis]
          Length = 125

 Score =  164 bits (414), Expect = 9e-39
 Identities = 81/98 (82%), Positives = 92/98 (93%), Gaps = 1/98 (1%)
 Frame = +3

Query: 33  REYRRNRNALFDGIEEGGIRATS-YSHEIDEQDNDRALDGLQDRVILLKRLSGDINEEVE 209
           R+ R +R ALFDGIEEGGIRA+S YSHEIDEQDN+RA++GLQDRVILLKRLSGDI+EEVE
Sbjct: 8   RDVRTSRTALFDGIEEGGIRASSSYSHEIDEQDNERAMEGLQDRVILLKRLSGDIHEEVE 67

Query: 210 SHNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 323
            HNR+LDR GN+MD+SRG+LSGTMDRFKMVFETKSSRR
Sbjct: 68  GHNRMLDRMGNDMDSSRGVLSGTMDRFKMVFETKSSRR 105


>ref|XP_002262985.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297744115|emb|CBI37085.3| unnamed protein product
           [Vitis vinifera]
          Length = 123

 Score =  162 bits (410), Expect = 3e-38
 Identities = 83/103 (80%), Positives = 92/103 (89%), Gaps = 2/103 (1%)
 Frame = +3

Query: 21  MQELREYRRNRNALFDGIEEGGIRATSY--SHEIDEQDNDRALDGLQDRVILLKRLSGDI 194
           M   R+YR NR ALFDGIEEGGIRA+S   SHEIDE DN+RA+DGLQDRV LLKRL+GDI
Sbjct: 1   MNSRRDYRGNRIALFDGIEEGGIRASSSYSSHEIDEHDNERAVDGLQDRVNLLKRLTGDI 60

Query: 195 NEEVESHNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 323
           +EEVESHNR+LDR GN+MDASRGILSGTMDRFKMVFET+SSRR
Sbjct: 61  HEEVESHNRMLDRVGNDMDASRGILSGTMDRFKMVFETRSSRR 103


>ref|XP_002307637.1| predicted protein [Populus trichocarpa] gi|222857086|gb|EEE94633.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  162 bits (409), Expect = 3e-38
 Identities = 82/103 (79%), Positives = 92/103 (89%), Gaps = 2/103 (1%)
 Frame = +3

Query: 21  MQELREYRRNRNALFDGIEEGGIRATSY--SHEIDEQDNDRALDGLQDRVILLKRLSGDI 194
           M   R+ R NR ALFDGIEEGGIRA+S   SHEIDEQDN+RAL+GLQDRVILLKRLSGDI
Sbjct: 1   MNSRRDIRNNRAALFDGIEEGGIRASSSYSSHEIDEQDNERALEGLQDRVILLKRLSGDI 60

Query: 195 NEEVESHNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 323
           NEEV++HN +LDR GN+MD+SRG+LSGTMDRFKMVFETKSSRR
Sbjct: 61  NEEVDNHNLMLDRMGNDMDSSRGVLSGTMDRFKMVFETKSSRR 103


>ref|XP_002285680.1| PREDICTED: bet1-like SNARE 1-1 [Vitis vinifera]
           gi|297741938|emb|CBI33373.3| unnamed protein product
           [Vitis vinifera]
          Length = 122

 Score =  160 bits (406), Expect = 8e-38
 Identities = 80/102 (78%), Positives = 92/102 (90%), Gaps = 1/102 (0%)
 Frame = +3

Query: 21  MQELREYRRNRNALFDGIEEGGIRATS-YSHEIDEQDNDRALDGLQDRVILLKRLSGDIN 197
           M   R++R NR A FDGIEEGGIRA+S YSHEIDE DN+ A+DGL+DRV++LKRL+GDI+
Sbjct: 1   MNSRRDHRGNRAATFDGIEEGGIRASSSYSHEIDEVDNETAVDGLEDRVVMLKRLTGDIH 60

Query: 198 EEVESHNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 323
           EEVESHNR+LDR GNEMDASRGILSGTM+RFKMVFETKSSRR
Sbjct: 61  EEVESHNRMLDRVGNEMDASRGILSGTMERFKMVFETKSSRR 102


>ref|XP_002300787.1| predicted protein [Populus trichocarpa] gi|222842513|gb|EEE80060.1|
           predicted protein [Populus trichocarpa]
          Length = 123

 Score =  159 bits (403), Expect = 2e-37
 Identities = 81/103 (78%), Positives = 91/103 (88%), Gaps = 2/103 (1%)
 Frame = +3

Query: 21  MQELREYRRNRNALFDGIEEGGIRATSY--SHEIDEQDNDRALDGLQDRVILLKRLSGDI 194
           M   R+ R NR ALFDGIEEGGIRA+S   SHEIDEQDN+RAL+GL+DRV LLKRLSGDI
Sbjct: 1   MNSRRDVRNNRAALFDGIEEGGIRASSSYSSHEIDEQDNERALEGLEDRVSLLKRLSGDI 60

Query: 195 NEEVESHNRLLDRTGNEMDASRGILSGTMDRFKMVFETKSSRR 323
           NEEV+SHN +LDR GN+MD+SRG+LSGTMDRFKMVFETKSSRR
Sbjct: 61  NEEVDSHNLMLDRMGNDMDSSRGVLSGTMDRFKMVFETKSSRR 103


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