BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013228
         (198 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI15409.3| unnamed protein product [Vitis vinifera]               59   5e-07
ref|XP_002273351.1| PREDICTED: transcription initiation factor T...    59   5e-07
ref|XP_002273382.1| PREDICTED: transcription initiation factor T...    59   5e-07
emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]    59   5e-07
ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|2...    58   9e-07

>emb|CBI15409.3| unnamed protein product [Vitis vinifera]
          Length = 1245

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
 Frame = -1

Query: 198 VKLIRIDYWIEKAETGIHFDRNVLHACILIIR*GVHSVGFPV*TTLH-------SITVAQ 40
           VKL+R+DYW+E+AETGIHF+ NVLH    I R       FP               TVA 
Sbjct: 309 VKLVRVDYWVERAETGIHFEDNVLHTDNQIRR---ARCWFPCMDDTSQCCCYDLEFTVAH 365

Query: 39  NFVVVSNGTLLYQ 1
           N V VS G+LLYQ
Sbjct: 366 NLVAVSTGSLLYQ 378


>ref|XP_002273351.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 1 [Vitis vinifera]
          Length = 1325

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
 Frame = -1

Query: 198 VKLIRIDYWIEKAETGIHFDRNVLHACILIIR*GVHSVGFPV*TTLH-------SITVAQ 40
           VKL+R+DYW+E+AETGIHF+ NVLH    I R       FP               TVA 
Sbjct: 155 VKLVRVDYWVERAETGIHFEDNVLHTDNQIRR---ARCWFPCMDDTSQCCCYDLEFTVAH 211

Query: 39  NFVVVSNGTLLYQ 1
           N V VS G+LLYQ
Sbjct: 212 NLVAVSTGSLLYQ 224


>ref|XP_002273382.1| PREDICTED: transcription initiation factor TFIID subunit 2-like
           isoform 2 [Vitis vinifera]
          Length = 1345

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
 Frame = -1

Query: 198 VKLIRIDYWIEKAETGIHFDRNVLHACILIIR*GVHSVGFPV*TTLH-------SITVAQ 40
           VKL+R+DYW+E+AETGIHF+ NVLH    I R       FP               TVA 
Sbjct: 155 VKLVRVDYWVERAETGIHFEDNVLHTDNQIRR---ARCWFPCMDDTSQCCCYDLEFTVAH 211

Query: 39  NFVVVSNGTLLYQ 1
           N V VS G+LLYQ
Sbjct: 212 NLVAVSTGSLLYQ 224


>emb|CAN81006.1| hypothetical protein VITISV_011581 [Vitis vinifera]
          Length = 257

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 35/73 (47%), Positives = 41/73 (56%), Gaps = 7/73 (9%)
 Frame = -1

Query: 198 VKLIRIDYWIEKAETGIHFDRNVLHACILIIR*GVHSVGFPV*TTLH-------SITVAQ 40
           VKL+R+DYW+E+AETGIHF+ NVLH    I R       FP               TVA 
Sbjct: 155 VKLVRVDYWVERAETGIHFEDNVLHTDNQIRR---ARCWFPCMDDTSQCCCYDLEFTVAH 211

Query: 39  NFVVVSNGTLLYQ 1
           N V VS G+LLYQ
Sbjct: 212 NLVAVSTGSLLYQ 224


>ref|XP_002321457.1| predicted protein [Populus trichocarpa] gi|222868453|gb|EEF05584.1|
           predicted protein [Populus trichocarpa]
          Length = 1359

 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 35/70 (50%), Positives = 40/70 (57%), Gaps = 4/70 (5%)
 Frame = -1

Query: 198 VKLIRIDYWIEKAETGIHFDRNVLHACILIIR----*GVHSVGFPV*TTLHSITVAQNFV 31
           VKL+RI+YW+EKAETGIHFD  V+H    I R          GF         TVA N V
Sbjct: 153 VKLVRINYWVEKAETGIHFDNEVVHTDNQIRRARCWFPCMDEGFQRCCYDLEFTVAHNLV 212

Query: 30  VVSNGTLLYQ 1
            VS G+LLYQ
Sbjct: 213 AVSTGSLLYQ 222