BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013224
         (962 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI17870.3| unnamed protein product [Vitis vinifera]              305   1e-80
ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like...   305   1e-80
ref|XP_002511366.1| ring finger protein, putative [Ricinus commu...   282   1e-73
ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thali...   266   5e-69
sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL...   266   5e-69

>emb|CBI17870.3| unnamed protein product [Vitis vinifera]
          Length = 457

 Score =  305 bits (780), Expect = 1e-80
 Identities = 169/279 (60%), Positives = 201/279 (72%), Gaps = 8/279 (2%)
 Frame = +3

Query: 3   GIDRSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVDTWLD 182
           GIDR+VIE+LP+FRF+SLRGQKDGLEC+VCLNRFE  E+LRLLPKCKHAFHVECVDTWLD
Sbjct: 103 GIDRTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLD 162

Query: 183 AHSTCPLCRYRVDPEDVLLVEEIKLGVEERTSATELAKNRESAE----FTRRISGRHSSA 350
           AHSTCPLCRYRVDPED+LLVEE K+ V            +  AE      RR+SGRHSSA
Sbjct: 163 AHSTCPLCRYRVDPEDILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSA 222

Query: 351 GERTSNFHFLQILIEKPSESTQYSRRSVD--SAISRKRSESVTVGCFERGVRKDGLLLSE 524
           GER S    +QI++ KP E+T  SRRS+D  S+ SRKR+E V VGCF+R  RKD LLL+ 
Sbjct: 223 GERRSG--LVQIVLHKPDETTS-SRRSLDSSSSSSRKRNEPVAVGCFDR-PRKDELLLTS 278

Query: 525 SDRENFLKRFEHKIILS--NESGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQHKR 698
            DR +F +R +H+II+S     G H RWSD++PSDLLYL+SEMIIS+N R  LSS     
Sbjct: 279 EDRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRR--LSSCHGTI 336

Query: 699 VAEDKSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 815
                SGR VIN+RSVSEITGL+R          + +QR
Sbjct: 337 EGGSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQR 375


>ref|XP_002267344.1| PREDICTED: RING-H2 finger protein ATL43-like [Vitis vinifera]
          Length = 404

 Score =  305 bits (780), Expect = 1e-80
 Identities = 169/279 (60%), Positives = 201/279 (72%), Gaps = 8/279 (2%)
 Frame = +3

Query: 3   GIDRSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVDTWLD 182
           GIDR+VIE+LP+FRF+SLRGQKDGLEC+VCLNRFE  E+LRLLPKCKHAFHVECVDTWLD
Sbjct: 103 GIDRTVIESLPVFRFASLRGQKDGLECAVCLNRFEPTEILRLLPKCKHAFHVECVDTWLD 162

Query: 183 AHSTCPLCRYRVDPEDVLLVEEIKLGVEERTSATELAKNRESAE----FTRRISGRHSSA 350
           AHSTCPLCRYRVDPED+LLVEE K+ V            +  AE      RR+SGRHSSA
Sbjct: 163 AHSTCPLCRYRVDPEDILLVEEPKISVAPPPEPDPPEVEKPDAEPRNPEVRRVSGRHSSA 222

Query: 351 GERTSNFHFLQILIEKPSESTQYSRRSVD--SAISRKRSESVTVGCFERGVRKDGLLLSE 524
           GER S    +QI++ KP E+T  SRRS+D  S+ SRKR+E V VGCF+R  RKD LLL+ 
Sbjct: 223 GERRSG--LVQIVLHKPDETTS-SRRSLDSSSSSSRKRNEPVAVGCFDR-PRKDELLLTS 278

Query: 525 SDRENFLKRFEHKIILS--NESGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQHKR 698
            DR +F +R +H+II+S     G H RWSD++PSDLLYL+SEMIIS+N R  LSS     
Sbjct: 279 EDRNSFERRLDHRIIVSAAGSGGFHQRWSDVQPSDLLYLRSEMIISDNRR--LSSCHGTI 336

Query: 699 VAEDKSGRDVINARSVSEITGLNRFSHKTEVYTENSEQR 815
                SGR VIN+RSVSEITGL+R          + +QR
Sbjct: 337 EGGSWSGRSVINSRSVSEITGLSRLGSNYHHLDRHHQQR 375


>ref|XP_002511366.1| ring finger protein, putative [Ricinus communis]
            gi|223550481|gb|EEF51968.1| ring finger protein, putative
            [Ricinus communis]
          Length = 493

 Score =  282 bits (721), Expect = 1e-73
 Identities = 168/331 (50%), Positives = 208/331 (62%), Gaps = 60/331 (18%)
 Frame = +3

Query: 3    GIDRSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVDTWLD 182
            GIDR+VIE+LPIFRFSSLRGQKDGLEC+VCL RFE  EVLRLLPKCKHAFHVECVDTWLD
Sbjct: 131  GIDRAVIESLPIFRFSSLRGQKDGLECAVCLTRFEPPEVLRLLPKCKHAFHVECVDTWLD 190

Query: 183  AHSTCPLCRYRVDPEDVLLVEEIKLGVEERTSATELAKNRESAEF---TRRISGRHSSAG 353
            AHSTCPLCRYRVDPEDVLL+++ K      T+ +     ++S E     RRISGRHSSAG
Sbjct: 191  AHSTCPLCRYRVDPEDVLLIDQDK-DPATTTNISLPPPQQQSTEIHGGGRRISGRHSSAG 249

Query: 354  ERTSNFHFLQILIEKPS---ESTQYSRRSVDSAISRK-------RSESVTVGCFER---G 494
            E+ S F   QI++++PS   ++T ++RRS+DS   +K       R+ESV VGCF+R    
Sbjct: 250  EKASGFALSQIVVQRPSATEQTTWFARRSLDSFSMKKNKNNHITRNESVAVGCFDRYQSH 309

Query: 495  VRKDGLLL--------SESDRENF---------------------LKRFEHKIILSNESG 587
             RKDGLLL         +SD ++                        RFEH+II+S  + 
Sbjct: 310  QRKDGLLLLTNNSNGDGDSDGDDHSLESRRTSTASVNAGAGAGVDKTRFEHRIIVSG-NA 368

Query: 588  SHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQHKRVAE---------------DKSGR 722
            S  RWSD+ PSDLLYL+SEMI+S+N R+S++S     V                    GR
Sbjct: 369  SDERWSDVHPSDLLYLRSEMILSDNRRFSMTSGSRPSVGRRQHHQKQQNAVVKGPSSDGR 428

Query: 723  DVINARSVSEITGLNRFSHKTEVYTENSEQR 815
             VIN RSVSEITGLNRFS +    + +  +R
Sbjct: 429  SVINGRSVSEITGLNRFSDRESNNSRHHRER 459


>ref|NP_196200.2| RING-H2 finger protein ATL43 [Arabidopsis thaliana]
           gi|58743300|gb|AAW81728.1| At5g05810 [Arabidopsis
           thaliana] gi|61656157|gb|AAX49381.1| At5g05810
           [Arabidopsis thaliana] gi|332003545|gb|AED90928.1|
           RING-H2 finger protein ATL43 [Arabidopsis thaliana]
          Length = 353

 Score =  266 bits (680), Expect = 5e-69
 Identities = 148/267 (55%), Positives = 183/267 (68%), Gaps = 11/267 (4%)
 Frame = +3

Query: 3   GIDRSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVDTWLD 182
           GIDRSVIE+LP+FRF +L G KDGLEC+VCL RFE  EVLRLLPKCKHAFHVECVDTWLD
Sbjct: 66  GIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLD 125

Query: 183 AHSTCPLCRYRVDPEDVLLVEEIKLGVEERTSATEL-AKNRESAEFTR-----RISGRHS 344
           AHSTCPLCRYRVDPED+LL+ +     E + S  E  + N      TR     RISGRHS
Sbjct: 126 AHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRISGRHS 185

Query: 345 SAGERTSNFHFLQILIEKPSESTQYSRRSVDSAI-----SRKRSESVTVGCFERGVRKDG 509
           SAGER S  + ++      S    + RRS+DS++       ++SESV V C +R  RKDG
Sbjct: 186 SAGERASRLNEIRTSSSYKSNPMSF-RRSLDSSLKVNDAGEEKSESVAVNCLDRLQRKDG 244

Query: 510 LLLSESDRENFLKRFEHKIILSNESGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQ 689
           LLL   +RE+F  RFEH+II+S  +    RWS++RPSDLLYL+SEMI+S+          
Sbjct: 245 LLLI-PNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSD---------- 293

Query: 690 HKRVAEDKSGRDVINARSVSEITGLNR 770
            +++A  + GRDVIN RSVSE+TG+ R
Sbjct: 294 CRKLAAAEGGRDVINGRSVSELTGIER 320


>sp|Q5EAE9.2|ATL43_ARATH RecName: Full=RING-H2 finger protein ATL43; Flags: Precursor
           gi|9759106|dbj|BAB09675.1| unnamed protein product
           [Arabidopsis thaliana]
          Length = 407

 Score =  266 bits (680), Expect = 5e-69
 Identities = 148/267 (55%), Positives = 183/267 (68%), Gaps = 11/267 (4%)
 Frame = +3

Query: 3   GIDRSVIETLPIFRFSSLRGQKDGLECSVCLNRFESNEVLRLLPKCKHAFHVECVDTWLD 182
           GIDRSVIE+LP+FRF +L G KDGLEC+VCL RFE  EVLRLLPKCKHAFHVECVDTWLD
Sbjct: 120 GIDRSVIESLPVFRFGALSGHKDGLECAVCLARFEPTEVLRLLPKCKHAFHVECVDTWLD 179

Query: 183 AHSTCPLCRYRVDPEDVLLVEEIKLGVEERTSATEL-AKNRESAEFTR-----RISGRHS 344
           AHSTCPLCRYRVDPED+LL+ +     E + S  E  + N      TR     RISGRHS
Sbjct: 180 AHSTCPLCRYRVDPEDILLIGDCNSWFELQFSKDESNSVNNNPPGLTRFIPVSRISGRHS 239

Query: 345 SAGERTSNFHFLQILIEKPSESTQYSRRSVDSAI-----SRKRSESVTVGCFERGVRKDG 509
           SAGER S  + ++      S    + RRS+DS++       ++SESV V C +R  RKDG
Sbjct: 240 SAGERASRLNEIRTSSSYKSNPMSF-RRSLDSSLKVNDAGEEKSESVAVNCLDRLQRKDG 298

Query: 510 LLLSESDRENFLKRFEHKIILSNESGSHNRWSDLRPSDLLYLQSEMIISNNGRYSLSSNQ 689
           LLL   +RE+F  RFEH+II+S  +    RWS++RPSDLLYL+SEMI+S+          
Sbjct: 299 LLLI-PNRESFEGRFEHRIIISGGNRDDQRWSEVRPSDLLYLRSEMILSD---------- 347

Query: 690 HKRVAEDKSGRDVINARSVSEITGLNR 770
            +++A  + GRDVIN RSVSE+TG+ R
Sbjct: 348 CRKLAAAEGGRDVINGRSVSELTGIER 374