BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013223
         (716 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]   115   1e-23
ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase y...   111   1e-22
ref|XP_002300031.1| predicted protein [Populus trichocarpa] gi|2...   103   5e-20
ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase Y...   102   1e-19
ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase Y...   102   1e-19

>emb|CAN74970.1| hypothetical protein VITISV_001039 [Vitis vinifera]
          Length = 408

 Score =  115 bits (287), Expect = 1e-23
 Identities = 60/104 (57%), Positives = 72/104 (69%)
 Frame = -3

Query: 714 SSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFGRTHLAIYGPKWAQKRRKSDISA 535
           SSSALVGED+FIVVEYP R DMLD+CGCLVKI+DRRFGRTHLAIYGPKWAQKRRKS+ S 
Sbjct: 257 SSSALVGEDTFIVVEYPLRIDMLDSCGCLVKIADRRFGRTHLAIYGPKWAQKRRKSEKSF 316

Query: 534 GTILRKFQVESKRNSFTET*RIVRLMCF*SRVQDLLHEPRECIN 403
             +  K              R+   +C+ SR+  LL +  + +N
Sbjct: 317 PVVAEKMIANG---------RLKVWLCWHSRISTLLDKYEKILN 351


>ref|XP_002281501.1| PREDICTED: putative rRNA methyltransferase ylbH [Vitis vinifera]
           gi|296087748|emb|CBI35004.3| unnamed protein product
           [Vitis vinifera]
          Length = 331

 Score =  111 bits (278), Expect = 1e-22
 Identities = 53/66 (80%), Positives = 58/66 (87%)
 Frame = -3

Query: 714 SSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFGRTHLAIYGPKWAQKRRKSDISA 535
           SSSALVGED+FIVVEYP R DMLD+CGCLVKI+DRRFGRTHLAIYGPKWAQKRRKS+ S 
Sbjct: 257 SSSALVGEDTFIVVEYPLRIDMLDSCGCLVKIADRRFGRTHLAIYGPKWAQKRRKSEKSF 316

Query: 534 GTILRK 517
             +  K
Sbjct: 317 PVVAEK 322


>ref|XP_002300031.1| predicted protein [Populus trichocarpa] gi|222847289|gb|EEE84836.1|
           predicted protein [Populus trichocarpa]
          Length = 321

 Score =  103 bits (256), Expect = 5e-20
 Identities = 46/55 (83%), Positives = 52/55 (94%)
 Frame = -3

Query: 714 SSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFGRTHLAIYGPKWAQKRRK 550
           S S +VGED+FIVVEYP RTDMLD+CGCLVKI+DRRFGRTHLAIYGP+WAQK+RK
Sbjct: 266 SKSPIVGEDTFIVVEYPLRTDMLDSCGCLVKINDRRFGRTHLAIYGPEWAQKKRK 320


>ref|XP_004166866.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 313

 Score =  102 bits (253), Expect = 1e-19
 Identities = 45/55 (81%), Positives = 52/55 (94%)
 Frame = -3

Query: 714 SSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFGRTHLAIYGPKWAQKRRK 550
           S SALVGED+FIVVEYP RTDML++CGCL KI+DRRFGRTHLAIYGPKWA+K++K
Sbjct: 256 SKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIYGPKWAEKKKK 310


>ref|XP_004148680.1| PREDICTED: putative rRNA methyltransferase YlbH-like [Cucumis
           sativus]
          Length = 315

 Score =  102 bits (253), Expect = 1e-19
 Identities = 45/55 (81%), Positives = 52/55 (94%)
 Frame = -3

Query: 714 SSSALVGEDSFIVVEYPSRTDMLDTCGCLVKISDRRFGRTHLAIYGPKWAQKRRK 550
           S SALVGED+FIVVEYP RTDML++CGCL KI+DRRFGRTHLAIYGPKWA+K++K
Sbjct: 256 SKSALVGEDTFIVVEYPLRTDMLESCGCLTKITDRRFGRTHLAIYGPKWAEKKKK 310