BLASTX nr result

ID: Coptis24_contig00013217 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013217
         (957 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [S...    79   2e-12
ref|XP_003522973.1| PREDICTED: uncharacterized protein LOC100778...    76   1e-11
gb|AAN05390.1| putative transposon protein [Oryza sativa Japonic...    75   2e-11
ref|NP_001064287.2| Os10g0195100 [Oryza sativa Japonica Group] g...    75   2e-11
ref|XP_002446062.1| hypothetical protein SORBIDRAFT_06g001200 [S...    75   3e-11

>ref|XP_002443905.1| hypothetical protein SORBIDRAFT_07g004115 [Sorghum bicolor]
           gi|241940255|gb|EES13400.1| hypothetical protein
           SORBIDRAFT_07g004115 [Sorghum bicolor]
          Length = 565

 Score = 79.0 bits (193), Expect = 2e-12
 Identities = 68/251 (27%), Positives = 116/251 (46%), Gaps = 3/251 (1%)
 Frame = +3

Query: 87  KMLVLVSSKGTAVGPYGAKWATRLGHFIRVTIPLNYKDWRLVKQSFKDAVWEALAGEFEY 266
           K+ + ++  G  +G    ++++ +G  +R T+ +   DWRLV    KD VWE L  EF Y
Sbjct: 126 KIKITLNEFGQPIGQNYRQFSSAIGCLVRRTLSVGCSDWRLVDVEKKDQVWETLK-EF-Y 183

Query: 267 DVPMALAYKQLQREFSSKFRTAKSNYRKEIIKKALSKEAAIAACPDGMNPTIWAEFVTRE 446
           DV  A A        + K++  K+  +KE   + ++ EA      D + PT W   +   
Sbjct: 184 DVDEA-AKNWFLITAARKWKDFKATLKKEFFDEKITIEALQRKHGDRVKPTDWKFLIKHW 242

Query: 447 FRPEVVQRNAKNASNRKMNTIGHTLGRQKYAQIRYKKKQKNPNVKVRREDDWLTGHERRD 626
             PE   R   + +NR    I HT G + +A  R++   +   V  RR++ ++  H R++
Sbjct: 243 TSPEFEARMEISKANRTKLRIHHTSGSKSFACSRHEMAIELGRVP-RRDEIYIRTHTRKN 301

Query: 627 GSVLESARVAYEQVKSVKER--KAIEASARGEEDTDEVIDLEGDVLVEVFG-KDKKGRTR 797
           G   + A     +++SV E   + IE S +           +GDV     G K+ +GR R
Sbjct: 302 GVPSQQAEPIINKLRSVVEAHPELIERSIQ-----------QGDVFTVACGEKEPRGRVR 350

Query: 798 GVGSQISPAQV 830
            +G   +P  +
Sbjct: 351 ALGLGPTPQDI 361


>ref|XP_003522973.1| PREDICTED: uncharacterized protein LOC100778497 [Glycine max]
          Length = 482

 Score = 76.3 bits (186), Expect = 1e-11
 Identities = 53/209 (25%), Positives = 91/209 (43%)
 Frame = +3

Query: 180 IPLNYKDWRLVKQSFKDAVWEALAGEFEYDVPMALAYKQLQREFSSKFRTAKSNYRKEII 359
           +P+N++ W  V +S+KD  +  L   F +    + A +      S K+R  K        
Sbjct: 181 VPINFESWTKVPKSYKDNCFNILKTLFHFQASESTARRYCLLTMSRKYRNGKHKLWTSAF 240

Query: 360 KKALSKEAAIAACPDGMNPTIWAEFVTREFRPEVVQRNAKNASNRKMNTIGHTLGRQKYA 539
             +LS+E  IA  P G+    W  F+    +PE  +   KNA  R+  T+ HT G  K  
Sbjct: 241 DPSLSREQLIAKVPYGIPEDQWLSFIDNHLKPEYQELCRKNAVVRQKQTVPHT-GGAKLL 299

Query: 540 QIRYKKKQKNPNVKVRREDDWLTGHERRDGSVLESARVAYEQVKSVKERKAIEASARGEE 719
             +  + +      + R + ++   +++DGS +       E+ +S+ E+   E S    E
Sbjct: 300 SRKQHEMEVELGRPISRVELYIATRKKKDGSFVN------EEARSIGEKMTQEIS----E 349

Query: 720 DTDEVIDLEGDVLVEVFGKDKKGRTRGVG 806
             +       D L +V G+D  GR R +G
Sbjct: 350 CANPTEISTNDALAKVLGRDHCGRVRCLG 378


>gb|AAN05390.1| putative transposon protein [Oryza sativa Japonica Group]
          Length = 1620

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 4/254 (1%)
 Frame = +3

Query: 81   KAKMLVLVSSKGTAVGPYGAKWATRLGHFIRVTIPLNYKDWRLVKQSFKDAVWEALAGEF 260
            +AK+ + ++  G  VG    ++AT +G F+R  IP+   DWR V    K  VWE +   +
Sbjct: 1103 EAKIKITLNEFGQPVGLDSEEFATTVGTFVRKKIPVACGDWRDVDVKDKLKVWEDVQKHY 1162

Query: 261  ---EYDVPMALAYKQLQREFSSKFRTAKSNYRKEIIKKALSKEAAIAACPDGMNPTIWAE 431
               EY +   L    +       ++  K++ +K+     L+ E  +      +N   W  
Sbjct: 1163 EINEYGLHFVLETSHM------IWKDYKADLKKKHFDANLTDEELMDRRDLRVNEAQWKW 1216

Query: 432  FVTREFRPEVVQRNAKNASNRKMNTIGHTLGRQKYAQIRYKKKQKNPNVKVRREDDWLTG 611
             +     PE V R+ +  +NR M  + HT G + +A++ +    K      RR++ ++  
Sbjct: 1217 LINHWRSPEAVARSIRGKANRGMLRMLHTAGSKSHARVGHDMGVKTGR-PPRRDEVFVET 1275

Query: 612  HERRDGSVLESARVAYEQVKSVKERKAIEASARGEEDTDEVIDLEGDVLVEVFG-KDKKG 788
            H+R++G ++  A    E +K        EA+    E  ++ I  EGD+   V G K+ +G
Sbjct: 1276 HKRKNGEIIPEAAETVEMLK--------EAAEVNPELKNKTIQ-EGDLYSRVCGTKEPRG 1326

Query: 789  RTRGVGSQISPAQV 830
            R R +G   +P  V
Sbjct: 1327 RVRVLGKGPTPQDV 1340


>ref|NP_001064287.2| Os10g0195100 [Oryza sativa Japonica Group]
            gi|255679268|dbj|BAF26201.2| Os10g0195100 [Oryza sativa
            Japonica Group]
          Length = 1299

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 65/254 (25%), Positives = 116/254 (45%), Gaps = 4/254 (1%)
 Frame = +3

Query: 81   KAKMLVLVSSKGTAVGPYGAKWATRLGHFIRVTIPLNYKDWRLVKQSFKDAVWEALAGEF 260
            +AK+ + ++  G  VG    ++AT +G F+R  IP+   DWR V    K  VWE +   +
Sbjct: 855  EAKIKITLNEFGQPVGLDSEEFATTVGTFVRKKIPVACGDWRDVDVKDKLKVWEDVQKHY 914

Query: 261  ---EYDVPMALAYKQLQREFSSKFRTAKSNYRKEIIKKALSKEAAIAACPDGMNPTIWAE 431
               EY +   L    +       ++  K++ +K+     L+ E  +      +N   W  
Sbjct: 915  EINEYGLHFVLETSHM------IWKDYKADLKKKHFDANLTDEELMDRRDLRVNEAQWKW 968

Query: 432  FVTREFRPEVVQRNAKNASNRKMNTIGHTLGRQKYAQIRYKKKQKNPNVKVRREDDWLTG 611
             +     PE V R+ +  +NR M  + HT G + +A++ +    K      RR++ ++  
Sbjct: 969  LINHWRSPEAVARSIRGKANRGMLRMLHTAGSKSHARVGHDMGVKTGR-PPRRDEVFVET 1027

Query: 612  HERRDGSVLESARVAYEQVKSVKERKAIEASARGEEDTDEVIDLEGDVLVEVFG-KDKKG 788
            H+R++G ++  A    E +K        EA+    E  ++ I  EGD+   V G K+ +G
Sbjct: 1028 HKRKNGEIIPEAAETVEMLK--------EAAEVNPELKNKTIQ-EGDLYSRVCGTKEPRG 1078

Query: 789  RTRGVGSQISPAQV 830
            R R +G   +P  V
Sbjct: 1079 RVRVLGKGPTPQDV 1092


>ref|XP_002446062.1| hypothetical protein SORBIDRAFT_06g001200 [Sorghum bicolor]
           gi|241937245|gb|EES10390.1| hypothetical protein
           SORBIDRAFT_06g001200 [Sorghum bicolor]
          Length = 492

 Score = 74.7 bits (182), Expect = 3e-11
 Identities = 60/251 (23%), Positives = 102/251 (40%), Gaps = 3/251 (1%)
 Frame = +3

Query: 87  KMLVLVSSKGTAVGPYGAKWATRLGHFIRVT--IPLNYKDWRLVKQSFKDAVWEALAGEF 260
           +++V  +  G  +G  G      LG   R     P+  KDWR VK+   + + + +  +F
Sbjct: 47  RIVVRCNMLGQPIGKEGGLLGQFLGTIARNGGYCPVGAKDWREVKKHNVETIIQFIQTKF 106

Query: 261 EYDVPMALAYKQLQREFSSKFRTAKSNYRKEIIKKALSKEAAIAACPDGMNPTIWAEFVT 440
            Y        K + +     +R  K+  +K +      K      CPD +N   W   + 
Sbjct: 107 LYP---RSCEKWILKSIGRDWRKYKATLKKTLFNPKKKKSVLNERCPDDINEDQWKSLIK 163

Query: 441 REFRPEVVQRNAKNASNRKMNTIGHTLGRQKYAQIRYKKKQKNPNVK-VRREDDWLTGHE 617
                E    + KN  +R+M    HT G + YA+     +Q +P  K   R   +L  H+
Sbjct: 164 YWKSSEGQALSEKNKISREMKKTTHTAGTKSYARWSEDMRQADPEKKQPHRAKVYLATHK 223

Query: 618 RRDGSVLESARVAYEQVKSVKERKAIEASARGEEDTDEVIDLEGDVLVEVFGKDKKGRTR 797
           +R   + E           V+    ++      ++T+E +  EGD L  V G++K G+  
Sbjct: 224 KRGNGINEPV---------VQLENLLDTQPELAQNTEEGVAWEGDALHRVLGEEKSGQVH 274

Query: 798 GVGSQISPAQV 830
           G+G    P QV
Sbjct: 275 GMGLLPVPKQV 285


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