BLASTX nr result

ID: Coptis24_contig00013213 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013213
         (1079 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002272890.1| PREDICTED: uncharacterized protein LOC100267...   233   5e-59
emb|CBI26302.3| unnamed protein product [Vitis vinifera]              215   2e-53
ref|XP_002517077.1| conserved hypothetical protein [Ricinus comm...   213   9e-53
ref|XP_003536832.1| PREDICTED: uncharacterized protein LOC100807...   212   1e-52
ref|XP_003520234.1| PREDICTED: uncharacterized protein LOC100802...   208   2e-51

>ref|XP_002272890.1| PREDICTED: uncharacterized protein LOC100267439 [Vitis vinifera]
           gi|298204883|emb|CBI34190.3| unnamed protein product
           [Vitis vinifera]
          Length = 206

 Score =  233 bits (595), Expect = 5e-59
 Identities = 103/207 (49%), Positives = 133/207 (64%)
 Frame = -1

Query: 902 MSSVIITILSFSVLLQLTTSADILAPILSPFIDKVCKEVLCGKGKCKVSTNFSLGYMCEC 723
           M+S+ + +L    LL L+   D  +P LSPF+D +C EV CGKG CK S  +   ++CEC
Sbjct: 7   MASMALLLL----LLPLSAMGDDWSPALSPFLDNLCDEVECGKGTCKASLEYKFNFICEC 62

Query: 722 DQGWKQTTADAQKHFKFLPCVIPNCTLDYSCTKAPSPSPQIKDPPKNSSFLDPCNWAYCG 543
           D GWK+T  D +   K+LPCVIPNCTLDYSC  APSP+P +   P N S  DPC W YCG
Sbjct: 63  DSGWKRTRGDNEDGLKYLPCVIPNCTLDYSCMTAPSPAPAV---PHNESAFDPCYWMYCG 119

Query: 542 EGSCKKSDTFGYKCECQEGYANLLNDTALPCFSQCSLGMDCASLGITVQNKTASPNGASA 363
           EG C +S  +GYKCEC  GY NLLN +  PC+S+C+LG DC  LGI V N T+S N    
Sbjct: 120 EGKCTRSSAYGYKCECNSGYQNLLNISVYPCYSECALGSDCEKLGIKVSNSTSSSNSGDG 179

Query: 362 NHAYSLLPGKILWLTVLMIPTAMIPWK 282
           +   S LPGK  W+ +++I   ++ WK
Sbjct: 180 SGGGSFLPGKAHWVALVLISMGLLLWK 206


>emb|CBI26302.3| unnamed protein product [Vitis vinifera]
          Length = 212

 Score =  215 bits (547), Expect = 2e-53
 Identities = 105/211 (49%), Positives = 134/211 (63%), Gaps = 5/211 (2%)
 Frame = -1

Query: 899 SSVIITILSFSVLLQLTTS-ADILAPILSPFIDKVCKEVLCGKGKCKVSTNFSLGYMCEC 723
           S+ +I  L+  + LQ TT+ ++IL+P+LSP  D+VCKEV CGKG CK S +  L + CEC
Sbjct: 3   SANVIVFLTILLALQPTTTISEILSPLLSPIFDEVCKEVECGKGTCKPSNDSPLYFACEC 62

Query: 722 DQGWKQTTADAQKHFKFLPCVIPNCTLDYSCTKAPSPSPQIKDPPKNSSFLDPCNWAYCG 543
           + GW QT      H KFLPCVIPNCTLDYSC +APSP  Q K+   N S  DPC W  CG
Sbjct: 63  NPGWMQTRPAHDDHLKFLPCVIPNCTLDYSCKEAPSP-VQEKENRANLSLFDPCRWTDCG 121

Query: 542 EGSCKKSDTFGYKCECQEGYANLLNDTALPCFSQCSLGMDCASLGITVQNKTASPNGASA 363
            GSC K+  F + CEC+EGY NLLN T  PC  +CS+G+DC +LGIT  NK+ S   + A
Sbjct: 122 GGSCNKTSKFTHTCECREGYYNLLNITTFPCLRECSIGLDCLNLGITSSNKSTSSTPSMA 181

Query: 362 ----NHAYSLLPGKILWLTVLMIPTAMIPWK 282
               N A ++L G      + M+  AM+ WK
Sbjct: 182 DNGKNQAKTILQGNFYLWIIFMLSWAMVMWK 212


>ref|XP_002517077.1| conserved hypothetical protein [Ricinus communis]
           gi|223543712|gb|EEF45240.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 240

 Score =  213 bits (541), Expect = 9e-53
 Identities = 94/175 (53%), Positives = 119/175 (68%)
 Frame = -1

Query: 902 MSSVIITILSFSVLLQLTTSADILAPILSPFIDKVCKEVLCGKGKCKVSTNFSLGYMCEC 723
           +S +   + +  VL  +  ++D LAP+LSP  D  CK+V CGKG CK S+N S  Y CEC
Sbjct: 4   VSFIACLVATLVVLQSMIATSDFLAPLLSPIFDDACKKVECGKGTCKASSNSSFFYECEC 63

Query: 722 DQGWKQTTADAQKHFKFLPCVIPNCTLDYSCTKAPSPSPQIKDPPKNSSFLDPCNWAYCG 543
           D GWKQT +D     KFLPCV+PNCT+DYSC  APSP  Q K    N+S  DPC W  CG
Sbjct: 64  DPGWKQTRSDHDDTLKFLPCVVPNCTMDYSCVAAPSPI-QDKSSKSNASVFDPCFWTDCG 122

Query: 542 EGSCKKSDTFGYKCECQEGYANLLNDTALPCFSQCSLGMDCASLGITVQNKTASP 378
            GSC K+  F Y CEC EGY NLLN +A PCF +C++GMDC++LGI++ N++ASP
Sbjct: 123 GGSCNKTSPFTYSCECTEGYYNLLNISAFPCFKECAIGMDCSNLGISMSNRSASP 177


>ref|XP_003536832.1| PREDICTED: uncharacterized protein LOC100807319 [Glycine max]
          Length = 395

 Score =  212 bits (539), Expect = 1e-52
 Identities = 105/222 (47%), Positives = 137/222 (61%), Gaps = 6/222 (2%)
 Frame = -1

Query: 890 IITILSFSVLLQLTTSADILAPILSPFIDKVCKEVLCGKGKCKVSTNFSLGYMCECDQGW 711
           +I I++F +L  L+T++D L+P+LSP  D VCKEV CGKG CK S N +  + CEC QGW
Sbjct: 6   VIAIVAFLLLQPLSTTSDFLSPLLSPIFDDVCKEVECGKGTCKPSKNSTFLFECECHQGW 65

Query: 710 KQTTA--DAQKHFKFLPCVIPNCTLDYSCTKAPSPSPQIKDPPKNSSFLDPCNWAYCGEG 537
           KQ+ +  D +   KFLPC++PNCTLDYSC+KAP+P  Q K    N S    C+W  CG G
Sbjct: 66  KQSLSNDDDESSLKFLPCIVPNCTLDYSCSKAPAPV-QEKATKSNESIFYACHWVDCGGG 124

Query: 536 SCKKSDTFGYKCECQEGYANLLNDTALPCFSQCSLGMDCASLGITVQNKTASP----NGA 369
           SC K+  F Y CEC  GY NLLN TA PCF +CSLGM C+ LGI++ N + S     N  
Sbjct: 125 SCNKTSMFSYNCECDAGYYNLLNVTAFPCFRECSLGMGCSELGISMTNSSTSTPPALNDN 184

Query: 368 SANHAYSLLPGKILWLTVLMIPTAMIPWK*NDHVLLGSTLIG 243
             N   S+L G  LWL +L++  A +      H+ +G    G
Sbjct: 185 IKNEGSSILQGSSLWLIMLIMFVAKL------HLQIGQRYCG 220


>ref|XP_003520234.1| PREDICTED: uncharacterized protein LOC100802013 [Glycine max]
          Length = 213

 Score =  208 bits (529), Expect = 2e-51
 Identities = 97/204 (47%), Positives = 131/204 (64%), Gaps = 4/204 (1%)
 Frame = -1

Query: 890 IITILSFSVLLQLTTSADILAPILSPFIDKVCKEVLCGKGKCKVSTNFSLGYMCECDQGW 711
           ++ I++F +L  L+ ++D+L+P+LSP  D VCKEV CGKG CK S N +  + CEC  GW
Sbjct: 6   VVAIVAFLLLQPLSATSDLLSPLLSPIFDDVCKEVECGKGTCKPSKNSTFFFECECHPGW 65

Query: 710 KQTTADAQKHFKFLPCVIPNCTLDYSCTKAPSPSPQIKDPPKNSSFLDPCNWAYCGEGSC 531
           K+  ++ +   KFLPC++PNCTLDYSC+KAP+P  Q K    N S  D C+W  CG GSC
Sbjct: 66  KRAPSNDKMGLKFLPCIVPNCTLDYSCSKAPAP-VQEKSTKSNESIFDACHWIDCGGGSC 124

Query: 530 KKSDTFGYKCECQEGYANLLNDTALPCFSQCSLGMDCASLGITVQNKTASP----NGASA 363
            K+  F Y CEC  GY NLLN T  PCF +CSLG+ C+ LGI+V+N + S     N  S 
Sbjct: 125 NKTSKFSYSCECDVGYDNLLNVTTFPCFRECSLGLGCSELGISVKNSSTSAPPTLNDNSK 184

Query: 362 NHAYSLLPGKILWLTVLMIPTAMI 291
           N   S+L G  L L +L++  A +
Sbjct: 185 NEGSSILQGNSLRLVMLIMFVAKL 208


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