BLASTX nr result

ID: Coptis24_contig00013210 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013210
         (778 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI34597.3| unnamed protein product [Vitis vinifera]               90   2e-17
ref|XP_002271355.2| PREDICTED: uncharacterized protein LOC100250...    90   6e-16
emb|CBI23073.3| unnamed protein product [Vitis vinifera]               90   6e-16
ref|XP_002271796.2| PREDICTED: cucumisin-like [Vitis vinifera]         84   3e-14
emb|CBI24380.3| unnamed protein product [Vitis vinifera]               84   3e-14

>emb|CBI34597.3| unnamed protein product [Vitis vinifera]
          Length = 352

 Score = 89.7 bits (221), Expect(2) = 2e-17
 Identities = 56/135 (41%), Positives = 72/135 (53%), Gaps = 12/135 (8%)
 Frame = +3

Query: 213 GIGTQPQSDPCCLFLNLELESY-----SPNERQMPRQFIDAWSTARD------NRTGTNK 359
           G+ TQ  +  C L L+ +L S+     +  E Q  R FIDAWSTA        N    +K
Sbjct: 210 GVQTQRLNHQCGLLLSPKLASFQDTNLNQGETQTARDFIDAWSTAERGGDSDINEICNSK 269

Query: 360 SFFDDSGKLSPSTLSLSMSGDNGVGEDTD*I-QMGLGITDYEFDNSGGSKSQPLSWMTPV 536
                 GKL  S+L+LSM G +G  E +    ++  G+ D E +N G  KSQPL+WM PV
Sbjct: 270 CPVSSRGKLPLSSLTLSMCGGDGSNEKSSLHGELSPGVMDLERENGGCFKSQPLNWMNPV 329

Query: 537 SWMTSAPGGPLGEVL 581
            WM S PGGPL E L
Sbjct: 330 PWMASPPGGPLAEAL 344



 Score = 25.4 bits (54), Expect(2) = 2e-17
 Identities = 22/79 (27%), Positives = 34/79 (43%), Gaps = 9/79 (11%)
 Frame = +1

Query: 4   SFLNMATVRPYKDSRCMD*MLKGQNVSIPSKDLREMMQAKGNSSTN--------TTFPQH 159
           +F  +A+  PY   RC +   KG  V    + L  M+Q+K     N        + F Q 
Sbjct: 134 AFTTLASAPPYGQVRCPEWFTKGDTVHQQWQQL--MLQSKHGVKRNSPSCDKNVSVFKQR 191

Query: 160 YQ-ENNNLSSFTDFRSSFG 213
           Y  E    SSF++  ++ G
Sbjct: 192 YDGEPLYSSSFSELSAAHG 210


>ref|XP_002271355.2| PREDICTED: uncharacterized protein LOC100250422 [Vitis vinifera]
          Length = 549

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 54/120 (45%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = +3

Query: 228 PQSDPCCLFLNLELESYSPNERQMPRQFIDAWSTA-RDNRTGT-NKSFFDDSGKLSPSTL 401
           P  D   +FLN  + S    + + PR FIDAWS+A  +N   T NKS    +GKL  S+L
Sbjct: 355 PGRDSINMFLNPGVISLQKPQTETPRAFIDAWSSAVTENPANTCNKSSVSSNGKLPLSSL 414

Query: 402 SLSMSGDNGVGEDTD*IQMGLGITDYEFDNSGGSKSQPLSWMTPVSWMTSAPGGPLGEVL 581
           +LSM GDNG+  +    +MGL I D      G  K Q  +W+TP SW   APGGPL EVL
Sbjct: 415 TLSMGGDNGIENEMGRTEMGLRIVDS--GGGGCEKPQLSTWLTPASWAGLAPGGPLAEVL 472


>emb|CBI23073.3| unnamed protein product [Vitis vinifera]
          Length = 603

 Score = 89.7 bits (221), Expect = 6e-16
 Identities = 54/120 (45%), Positives = 68/120 (56%), Gaps = 2/120 (1%)
 Frame = +3

Query: 228 PQSDPCCLFLNLELESYSPNERQMPRQFIDAWSTA-RDNRTGT-NKSFFDDSGKLSPSTL 401
           P  D   +FLN  + S    + + PR FIDAWS+A  +N   T NKS    +GKL  S+L
Sbjct: 382 PGRDSINMFLNPGVISLQKPQTETPRAFIDAWSSAVTENPANTCNKSSVSSNGKLPLSSL 441

Query: 402 SLSMSGDNGVGEDTD*IQMGLGITDYEFDNSGGSKSQPLSWMTPVSWMTSAPGGPLGEVL 581
           +LSM GDNG+  +    +MGL I D      G  K Q  +W+TP SW   APGGPL EVL
Sbjct: 442 TLSMGGDNGIENEMGRTEMGLRIVDS--GGGGCEKPQLSTWLTPASWAGLAPGGPLAEVL 499


>ref|XP_002271796.2| PREDICTED: cucumisin-like [Vitis vinifera]
          Length = 727

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = +2

Query: 605 SGNQVTNVSFFGLAQSNARGAVASAKIAVYKVCWEEGCDAQDILSAFDDAICDGVDIL 778
           +GN+V +VSFF LAQ NARG V SA+IAVYKVC E GC + DIL+AFDDAI DGVDI+
Sbjct: 204 AGNKVEDVSFFELAQGNARGGVPSARIAVYKVCSEYGCQSADILAAFDDAISDGVDII 261


>emb|CBI24380.3| unnamed protein product [Vitis vinifera]
          Length = 760

 Score = 84.3 bits (207), Expect = 3e-14
 Identities = 41/58 (70%), Positives = 48/58 (82%)
 Frame = +2

Query: 605 SGNQVTNVSFFGLAQSNARGAVASAKIAVYKVCWEEGCDAQDILSAFDDAICDGVDIL 778
           +GN+V +VSFF LAQ NARG V SA+IAVYKVC E GC + DIL+AFDDAI DGVDI+
Sbjct: 175 AGNKVEDVSFFELAQGNARGGVPSARIAVYKVCSEYGCQSADILAAFDDAISDGVDII 232


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