BLASTX nr result

ID: Coptis24_contig00013205 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013205
         (215 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003539739.1| PREDICTED: V-type proton ATPase 116 kDa subu...    60   1e-07
ref|XP_003538035.1| PREDICTED: V-type proton ATPase 116 kDa subu...    60   2e-07
ref|XP_002456592.1| hypothetical protein SORBIDRAFT_03g038990 [S...    59   4e-07
ref|XP_003564548.1| PREDICTED: V-type proton ATPase 116 kDa subu...    59   5e-07
ref|XP_003606505.1| V-type proton ATPase 116 kDa subunit a isofo...    58   7e-07

>ref|XP_003539739.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like
           [Glycine max]
          Length = 818

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 33/53 (62%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
 Frame = +2

Query: 2   FAVATAFILLMMETLSAFLHALRFHWLEHFTTVMARVG----PFSFASSAKEE 148
           FA ATAFILLMMETLSAFLHALR HW+E      +  G    PFSFAS  ++E
Sbjct: 765 FAFATAFILLMMETLSAFLHALRLHWVEFQNKFYSGDGYKFKPFSFASLTEDE 817


>ref|XP_003538035.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like
           [Glycine max]
          Length = 818

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 33/53 (62%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = +2

Query: 2   FAVATAFILLMMETLSAFLHALRFHWLEHFTTVMARVG----PFSFASSAKEE 148
           FA ATAFILLMMETLSAFLHALR HW+E      +  G    PFSF S  +EE
Sbjct: 765 FAFATAFILLMMETLSAFLHALRLHWVEFQNKFYSGDGYKFKPFSFVSLTEEE 817


>ref|XP_002456592.1| hypothetical protein SORBIDRAFT_03g038990 [Sorghum bicolor]
           gi|241928567|gb|EES01712.1| hypothetical protein
           SORBIDRAFT_03g038990 [Sorghum bicolor]
          Length = 799

 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 33/53 (62%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
 Frame = +2

Query: 2   FAVATAFILLMMETLSAFLHALRFHWLEHFTTVMARVG----PFSFASSAKEE 148
           FA ATAFILLMMETLSAFLHALR HW+E         G    PFSFA  A +E
Sbjct: 746 FAFATAFILLMMETLSAFLHALRLHWVEFMNKFYHGDGYKFKPFSFALLADDE 798


>ref|XP_003564548.1| PREDICTED: V-type proton ATPase 116 kDa subunit a isoform 1-like
           [Brachypodium distachyon]
          Length = 817

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 33/53 (62%), Positives = 35/53 (66%), Gaps = 4/53 (7%)
 Frame = +2

Query: 2   FAVATAFILLMMETLSAFLHALRFHWLEHFTTVMARVG----PFSFASSAKEE 148
           FA ATAFILLMME+LSAFLHALR HW+E         G    PFSFA  A EE
Sbjct: 764 FAFATAFILLMMESLSAFLHALRLHWVEFMNKFYHGDGYKFKPFSFALLADEE 816


>ref|XP_003606505.1| V-type proton ATPase 116 kDa subunit a isoform [Medicago truncatula]
            gi|355507560|gb|AES88702.1| V-type proton ATPase 116 kDa
            subunit a isoform [Medicago truncatula]
          Length = 964

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 32/53 (60%), Positives = 36/53 (67%), Gaps = 4/53 (7%)
 Frame = +2

Query: 2    FAVATAFILLMMETLSAFLHALRFHWLEHFTTVMARVG----PFSFASSAKEE 148
            FA ATAFILLMMETLSAFLHALR HW+E         G    PFSFA+  ++E
Sbjct: 911  FAFATAFILLMMETLSAFLHALRLHWVEFQNKFYHGDGYKFRPFSFATLTEDE 963


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