BLASTX nr result

ID: Coptis24_contig00013194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00013194
         (351 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|2...   179   3e-43
ref|XP_002284367.1| PREDICTED: uncharacterized protein LOC100252...   175   4e-42
ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|2...   174   5e-42
ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|2...   172   3e-41
ref|XP_002518797.1| conserved hypothetical protein [Ricinus comm...   172   3e-41

>ref|XP_002327114.1| predicted protein [Populus trichocarpa] gi|222835429|gb|EEE73864.1|
           predicted protein [Populus trichocarpa]
          Length = 344

 Score =  179 bits (453), Expect = 3e-43
 Identities = 80/116 (68%), Positives = 96/116 (82%)
 Frame = -2

Query: 350 FNKDFVITKTPKKSPLVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCY 171
           FNKD ++ K PKKSPL+LR VV+ F+MVCGVYICSIC+KQIS     K ++I+   QPC 
Sbjct: 8   FNKDALVIKGPKKSPLLLRLVVVAFAMVCGVYICSICIKQISPHTTAKFLNIRIFDQPCN 67

Query: 170 ASGLEQWEIPYVHFPKPYTYSRNECACNPVRYFAILSMQRSGSGWFETLLNSHINI 3
           +S +E+WE PYVH+PKP T+SR ECACNPVR+FAI SMQRSGSGWFETLLNSHIN+
Sbjct: 68  SSNVEEWEKPYVHYPKPETFSREECACNPVRFFAIFSMQRSGSGWFETLLNSHINV 123


>ref|XP_002284367.1| PREDICTED: uncharacterized protein LOC100252224 [Vitis vinifera]
          Length = 344

 Score =  175 bits (443), Expect = 4e-42
 Identities = 81/116 (69%), Positives = 94/116 (81%)
 Frame = -2

Query: 350 FNKDFVITKTPKKSPLVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCY 171
           FNKD ++ KTPKKSPL+L  VVL+F+MVCGVYIC+ICLKQ S   K K +  Q I+Q   
Sbjct: 8   FNKDTLVIKTPKKSPLLLTMVVLVFAMVCGVYICAICLKQTSNNTKAKFLKFQVINQASP 67

Query: 170 ASGLEQWEIPYVHFPKPYTYSRNECACNPVRYFAILSMQRSGSGWFETLLNSHINI 3
           + G+E WEIPYVH+PKP T+SR EC CN VRYFAILSMQRSGSGWFETLLNSHIN+
Sbjct: 68  SFGIEPWEIPYVHYPKPKTHSREECVCNGVRYFAILSMQRSGSGWFETLLNSHINV 123


>ref|XP_002313841.1| predicted protein [Populus trichocarpa] gi|222850249|gb|EEE87796.1|
           predicted protein [Populus trichocarpa]
          Length = 345

 Score =  174 bits (442), Expect = 5e-42
 Identities = 79/115 (68%), Positives = 91/115 (79%)
 Frame = -2

Query: 347 NKDFVITKTPKKSPLVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCYA 168
           +KD  + K PKKSPL LR VVL+F+MVCGVYICSICLKQI     P  ++++ I +PC  
Sbjct: 10  SKDSFLIKAPKKSPLALRMVVLVFAMVCGVYICSICLKQIGIRTNPGFLNVEVIERPCPE 69

Query: 167 SGLEQWEIPYVHFPKPYTYSRNECACNPVRYFAILSMQRSGSGWFETLLNSHINI 3
             +E WEIPYVH+PKP TYSR EC CNPVRYFAILSMQRSGSGWFETLLN+H NI
Sbjct: 70  PNIEPWEIPYVHYPKPITYSRVECKCNPVRYFAILSMQRSGSGWFETLLNNHTNI 124


>ref|XP_002330322.1| predicted protein [Populus trichocarpa] gi|222871357|gb|EEF08488.1|
           predicted protein [Populus trichocarpa]
          Length = 333

 Score =  172 bits (436), Expect = 3e-41
 Identities = 78/114 (68%), Positives = 90/114 (78%)
 Frame = -2

Query: 344 KDFVITKTPKKSPLVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCYAS 165
           +D  I K PKKSPL LR VVL+F+MVCGVYICSICLKQI     P  ++++ I +PC   
Sbjct: 1   QDSFIIKAPKKSPLALRMVVLVFAMVCGVYICSICLKQIGIRTNPGFLNVEVIERPCPEP 60

Query: 164 GLEQWEIPYVHFPKPYTYSRNECACNPVRYFAILSMQRSGSGWFETLLNSHINI 3
            +E WEIPYVH+P+P TYSR EC CNPVRYFAILSMQRSGSGWFETLLN+H NI
Sbjct: 61  NIEPWEIPYVHYPRPKTYSRAECKCNPVRYFAILSMQRSGSGWFETLLNNHTNI 114


>ref|XP_002518797.1| conserved hypothetical protein [Ricinus communis]
           gi|223542178|gb|EEF43722.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 368

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/116 (69%), Positives = 90/116 (77%)
 Frame = -2

Query: 350 FNKDFVITKTPKKSPLVLRTVVLIFSMVCGVYICSICLKQISAFRKPKLIDIQAIHQPCY 171
           F+KD  I K+PKKSPLVLR VVL F MVCGVYICSICLKQIS    P +  +  I +PC 
Sbjct: 8   FSKDAFIIKSPKKSPLVLRMVVLAFVMVCGVYICSICLKQISISTNPGIFSLGVIEKPCP 67

Query: 170 ASGLEQWEIPYVHFPKPYTYSRNECACNPVRYFAILSMQRSGSGWFETLLNSHINI 3
              ++ WEIPYVH+PKP TYSR EC CNPVR FAILSMQRSGSGWFETLLN+H NI
Sbjct: 68  EPNIQPWEIPYVHYPKPKTYSRAECMCNPVRNFAILSMQRSGSGWFETLLNNHTNI 123


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